RNA–Protein interactions for RNA: ENST00000639835.1

STRADA-241, Transcript of STE20-related kinase adaptor alpha, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene STRADA, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-241ENST00000639835 NISCHQ9Y2I1 1504 aa22.07■■□□□ 1.12
STRADA-241ENST00000639835 CCDC180Q9P1Z9 1646 aa19.2■□□□□ 0.66
STRADA-241ENST00000639835 ZCCHC6Q5VYS8 1495 aaKnown RBP18.56■□□□□ 0.56
STRADA-241ENST00000639835 DCAF8L2P0C7V8 631 aa18.24■□□□□ 0.51
STRADA-241ENST00000639835 ABCC9O60706 1549 aa18.19■□□□□ 0.5
STRADA-241ENST00000639835 DCAF1Q9Y4B6 1507 aa18.17■□□□□ 0.5
STRADA-241ENST00000639835 SHROOM4Q9ULL8 1493 aa18.15■□□□□ 0.5
STRADA-241ENST00000639835 MYO15BQ96JP2 1530 aa17.92■□□□□ 0.46
STRADA-241ENST00000639835 SUPT5HO00267 1087 aaKnown RBP17.86■□□□□ 0.45
STRADA-241ENST00000639835 NACADO15069 1562 aa17.84■□□□□ 0.45
STRADA-241ENST00000639835 SCRIBQ14160 1630 aa17.77■□□□□ 0.43
STRADA-241ENST00000639835 RB1CC1Q8TDY2 1594 aa17.7■□□□□ 0.42
STRADA-241ENST00000639835 CHIC1Q5VXU3 224 aa17.55■□□□□ 0.4
STRADA-241ENST00000639835 HRCP23327 699 aa17.5■□□□□ 0.39
STRADA-241ENST00000639835 UNC13AQ9UPW8 1703 aa17.46■□□□□ 0.39
STRADA-241ENST00000639835 PCGF6Q9BYE7 350 aa17.26■□□□□ 0.35
STRADA-241ENST00000639835 BICRAQ9NZM4 1560 aa17.24■□□□□ 0.35
STRADA-241ENST00000639835 CECR2Q9BXF3 1484 aa17.21■□□□□ 0.35
STRADA-241ENST00000639835 PABPN1Q86U42 306 aaKnown RBP eCLIP17.17■□□□□ 0.34
STRADA-241ENST00000639835 RSF1Q96T23 1441 aaPredicted RBP17.15■□□□□ 0.34
STRADA-241ENST00000639835 MROH2BQ7Z745 1585 aa17.1■□□□□ 0.33
STRADA-241ENST00000639835 PPARGC1BQ86YN6 1023 aaKnown RBP17.09■□□□□ 0.33
STRADA-241ENST00000639835 LOC105371045A0A1W2PR82 267 aa17.03■□□□□ 0.32
STRADA-241ENST00000639835 BAZ1AQ9NRL2 1556 aaPredicted RBP17.01■□□□□ 0.31
STRADA-241ENST00000639835 WIZO95785 1651 aa16.99■□□□□ 0.31
STRADA-241ENST00000639835 SMARCA4P51532 1647 aa16.98■□□□□ 0.31
STRADA-241ENST00000639835 TRIM26Q12899 539 aaPredicted RBP16.88■□□□□ 0.29
STRADA-241ENST00000639835 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
STRADA-241ENST00000639835 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
STRADA-241ENST00000639835 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
STRADA-241ENST00000639835 ATAD2BQ9ULI0 1458 aa16.66■□□□□ 0.26
STRADA-241ENST00000639835 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
STRADA-241ENST00000639835 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
STRADA-241ENST00000639835 TRIM41Q8WV44 630 aa16.61■□□□□ 0.25
STRADA-241ENST00000639835 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
STRADA-241ENST00000639835 BAZ1BQ9UIG0 1483 aaKnown RBP16.57■□□□□ 0.24
STRADA-241ENST00000639835 FAM9AQ8IZU1 332 aaPredicted RBP16.49■□□□□ 0.23
STRADA-241ENST00000639835 HMGXB3Q12766 1538 aa16.46■□□□□ 0.23
STRADA-241ENST00000639835 NCAPD3P42695 1498 aa16.46■□□□□ 0.23
STRADA-241ENST00000639835 CC2D2AQ9P2K1 1620 aa16.44■□□□□ 0.22
STRADA-241ENST00000639835 ABCC8Q09428 1581 aa16.33■□□□□ 0.21
STRADA-241ENST00000639835 EHMT2Q96KQ7 1210 aa16.33■□□□□ 0.21
STRADA-241ENST00000639835 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
STRADA-241ENST00000639835 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
STRADA-241ENST00000639835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.15■□□□□ 0.18
STRADA-241ENST00000639835 SYNJ1O43426 1573 aa16.14■□□□□ 0.17
STRADA-241ENST00000639835 CFTRP13569 1480 aa16.14■□□□□ 0.17
STRADA-241ENST00000639835 WRNQ14191 1432 aaPredicted RBP eCLIP16.13■□□□□ 0.17
STRADA-241ENST00000639835 PRDM2Q13029 1718 aa16.11■□□□□ 0.17
STRADA-241ENST00000639835 CCER1Q8TC90 406 aaPredicted RBP16.1■□□□□ 0.17
STRADA-241ENST00000639835 DNAJC5BQ9UF47 199 aa16.09■□□□□ 0.17
STRADA-241ENST00000639835 CADPSQ9ULU8 1353 aa16.06■□□□□ 0.16
STRADA-241ENST00000639835 ACIN1Q9UKV3 1341 aaKnown RBP16.04■□□□□ 0.16
STRADA-241ENST00000639835 NESP48681 1621 aa16.01■□□□□ 0.15
STRADA-241ENST00000639835 SOGA1O94964 1423 aa16■□□□□ 0.15
STRADA-241ENST00000639835 NEUROD1Q13562 356 aa16■□□□□ 0.15
STRADA-241ENST00000639835 TOP2BQ02880 1626 aa16■□□□□ 0.15
STRADA-241ENST00000639835 BIVM-ERCC5R4GMW8 1640 aa16■□□□□ 0.15
STRADA-241ENST00000639835 CUX1P39880 1505 aa15.98■□□□□ 0.15
STRADA-241ENST00000639835 CEP162Q5TB80 1403 aa15.98■□□□□ 0.15
STRADA-241ENST00000639835 RUSC2Q8N2Y8 1516 aa15.97■□□□□ 0.15
STRADA-241ENST00000639835 DIEXFQ68CQ4 756 aaKnown RBP15.97■□□□□ 0.15
STRADA-241ENST00000639835 TNIKQ9UKE5 1360 aa15.94■□□□□ 0.14
STRADA-241ENST00000639835 FANCD2Q9BXW9 1451 aa15.92■□□□□ 0.14
STRADA-241ENST00000639835 LAMC3Q9Y6N6 1575 aa15.91■□□□□ 0.14
STRADA-241ENST00000639835 TTBK1Q5TCY1 1321 aaPredicted RBP15.89■□□□□ 0.13
STRADA-241ENST00000639835 EEA1Q15075 1411 aa15.87■□□□□ 0.13
STRADA-241ENST00000639835 CENPBP07199 599 aaPredicted RBP15.87■□□□□ 0.13
STRADA-241ENST00000639835 GTF3C3Q9Y5Q9 886 aa15.85■□□□□ 0.13
STRADA-241ENST00000639835 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.13
STRADA-241ENST00000639835 KIF21AQ7Z4S6 1674 aa15.83■□□□□ 0.12
STRADA-241ENST00000639835 CEP164Q9UPV0 1460 aa15.8■□□□□ 0.12
STRADA-241ENST00000639835 GOLGA3Q08378 1498 aa15.79■□□□□ 0.12
STRADA-241ENST00000639835 FGD5Q6ZNL6 1462 aa15.79■□□□□ 0.12
STRADA-241ENST00000639835 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
STRADA-241ENST00000639835 ZNF316A6NFI3 1004 aaPredicted RBP15.78■□□□□ 0.12
STRADA-241ENST00000639835 UBTFP17480 764 aaKnown RBP15.77■□□□□ 0.12
STRADA-241ENST00000639835 TOPBP1Q92547 1522 aa15.76■□□□□ 0.11
STRADA-241ENST00000639835 PDS5BQ9NTI5 1447 aa15.76■□□□□ 0.11
STRADA-241ENST00000639835 URB2Q14146 1524 aaKnown RBP15.75■□□□□ 0.11
STRADA-241ENST00000639835 KIF21BO75037 1637 aa15.73■□□□□ 0.11
STRADA-241ENST00000639835 POLA1P09884 1462 aaPredicted RBP15.69■□□□□ 0.1
STRADA-241ENST00000639835 CUX2O14529 1486 aa15.69■□□□□ 0.1
STRADA-241ENST00000639835 RAD54L2Q9Y4B4 1467 aa15.68■□□□□ 0.1
STRADA-241ENST00000639835 KIF27Q86VH2 1401 aa15.68■□□□□ 0.1
STRADA-241ENST00000639835 RAPGEF2Q9Y4G8 1499 aa15.66■□□□□ 0.1
STRADA-241ENST00000639835 WDR97A6NE52 1622 aa15.62■□□□□ 0.09
STRADA-241ENST00000639835 CLIP1P30622 1438 aa15.62■□□□□ 0.09
STRADA-241ENST00000639835 PRXQ9BXM0 1461 aa15.62■□□□□ 0.09
STRADA-241ENST00000639835 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
STRADA-241ENST00000639835 ABCA10Q8WWZ4 1543 aa15.61■□□□□ 0.09
STRADA-241ENST00000639835 MRC2Q9UBG0 1479 aa15.61■□□□□ 0.09
STRADA-241ENST00000639835 VPS8Q8N3P4 1428 aa15.6■□□□□ 0.09
STRADA-241ENST00000639835 MIER1Q8N108 512 aa15.59■□□□□ 0.09
STRADA-241ENST00000639835 YTHDC1Q96MU7 727 aaKnown RBP15.58■□□□□ 0.08
STRADA-241ENST00000639835 ERICH3Q5RHP9 1530 aa15.58■□□□□ 0.08
STRADA-241ENST00000639835 IGF1RP08069 1367 aa15.56■□□□□ 0.08
STRADA-241ENST00000639835 ERCC6Q03468 1493 aa15.54■□□□□ 0.08
STRADA-241ENST00000639835 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
STRADA-241ENST00000639835 WDR62O43379 1518 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms