RNA–Protein interactions for RNA: ENST00000639486.1

KCNMA1-261, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 8,850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-261ENST00000639486 PELP1Q8IZL8 1130 aaKnown RBP27.3■■□□□ 1.96
KCNMA1-261ENST00000639486 DCAF8L2P0C7V8 631 aa26.62■■□□□ 1.85
KCNMA1-261ENST00000639486 MYT1Q01538 1121 aa26.45■■□□□ 1.82
KCNMA1-261ENST00000639486 ERICH6Q7L0X2 663 aa25.99■■□□□ 1.75
KCNMA1-261ENST00000639486 CCER1Q8TC90 406 aaPredicted RBP25.94■■□□□ 1.74
KCNMA1-261ENST00000639486 SUPT5HO00267 1087 aaKnown RBP25.92■■□□□ 1.74
KCNMA1-261ENST00000639486 CENPBP07199 599 aaPredicted RBP25.8■■□□□ 1.72
KCNMA1-261ENST00000639486 APLP2Q06481 763 aa25.42■■□□□ 1.66
KCNMA1-261ENST00000639486 ZEB1P37275 1124 aaPredicted RBP25.4■■□□□ 1.66
KCNMA1-261ENST00000639486 PCGF6Q9BYE7 350 aa25.27■■□□□ 1.64
KCNMA1-261ENST00000639486 EHMT2Q96KQ7 1210 aa25.24■■□□□ 1.63
KCNMA1-261ENST00000639486 SHROOM4Q9ULL8 1493 aa25.15■■□□□ 1.62
KCNMA1-261ENST00000639486 NEFLP07196 543 aa25.14■■□□□ 1.61
KCNMA1-261ENST00000639486 NISCHQ9Y2I1 1504 aa25■■□□□ 1.59
KCNMA1-261ENST00000639486 YTHDC1Q96MU7 727 aaKnown RBP24.98■■□□□ 1.59
KCNMA1-261ENST00000639486 TTBK1Q5TCY1 1321 aaPredicted RBP24.76■■□□□ 1.55
KCNMA1-261ENST00000639486 FAM9AQ8IZU1 332 aaPredicted RBP24.74■■□□□ 1.55
KCNMA1-261ENST00000639486 DAXXQ9UER7 740 aaPredicted RBP24.67■■□□□ 1.54
KCNMA1-261ENST00000639486 RTL5Q5HYW3 569 aaPredicted RBP24.27■■□□□ 1.48
KCNMA1-261ENST00000639486 TRIM26Q12899 539 aaPredicted RBP24.11■■□□□ 1.45
KCNMA1-261ENST00000639486 HRCP23327 699 aa24.11■■□□□ 1.45
KCNMA1-261ENST00000639486 TRIM41Q8WV44 630 aa24.11■■□□□ 1.45
KCNMA1-261ENST00000639486 ZNF316A6NFI3 1004 aaPredicted RBP24.06■■□□□ 1.44
KCNMA1-261ENST00000639486 RANGAP1P46060 587 aaPredicted RBP23.99■■□□□ 1.43
KCNMA1-261ENST00000639486 ATP1B4Q9UN42 357 aaPredicted RBP23.96■■□□□ 1.43
KCNMA1-261ENST00000639486 UBTFP17480 764 aaKnown RBP23.94■■□□□ 1.42
KCNMA1-261ENST00000639486 DIEXFQ68CQ4 756 aaKnown RBP23.67■■□□□ 1.38
KCNMA1-261ENST00000639486 CLSPNQ9HAW4 1339 aa23.66■■□□□ 1.38
KCNMA1-261ENST00000639486 PPARGC1BQ86YN6 1023 aaKnown RBP23.53■■□□□ 1.36
KCNMA1-261ENST00000639486 GLIPR1L2Q4G1C9 344 aa23.5■■□□□ 1.35
KCNMA1-261ENST00000639486 POLR3GLQ9BT43 218 aa23.49■■□□□ 1.35
KCNMA1-261ENST00000639486 CDK11AQ9UQ88 783 aaPredicted RBP23.47■■□□□ 1.35
KCNMA1-261ENST00000639486 GTF3C3Q9Y5Q9 886 aa23.43■■□□□ 1.34
KCNMA1-261ENST00000639486 ITGAEP38570 1179 aa23.25■■□□□ 1.31
KCNMA1-261ENST00000639486 EIF5BO60841 1220 aaKnown RBP23.24■■□□□ 1.31
KCNMA1-261ENST00000639486 MYT1LQ9UL68 1186 aa23.23■■□□□ 1.31
KCNMA1-261ENST00000639486 ANP32AP39687 249 aaKnown RBP23.23■■□□□ 1.31
KCNMA1-261ENST00000639486 CNGB1Q14028 1251 aaPredicted RBP23.17■■□□□ 1.3
KCNMA1-261ENST00000639486 HNRNPUL2Q1KMD3 747 aaKnown RBP23.16■■□□□ 1.3
KCNMA1-261ENST00000639486 BCANQ96GW7 911 aa23.15■■□□□ 1.3
KCNMA1-261ENST00000639486 ANP32BQ92688 251 aaKnown RBP23.12■■□□□ 1.29
KCNMA1-261ENST00000639486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.11■■□□□ 1.29
KCNMA1-261ENST00000639486 ZBTB47Q9UFB7 747 aaPredicted RBP23.06■■□□□ 1.28
KCNMA1-261ENST00000639486 SLC4A1APQ9BWU0 796 aaKnown RBP23.05■■□□□ 1.28
KCNMA1-261ENST00000639486 ANP32CO43423 234 aa23.05■■□□□ 1.28
KCNMA1-261ENST00000639486 ACIN1Q9UKV3 1341 aaKnown RBP23■■□□□ 1.27
KCNMA1-261ENST00000639486 LOC105371045A0A1W2PR82 267 aa22.96■■□□□ 1.27
KCNMA1-261ENST00000639486 CANXP27824 592 aaKnown RBP22.83■■□□□ 1.24
KCNMA1-261ENST00000639486 CHIC1Q5VXU3 224 aa22.74■■□□□ 1.23
KCNMA1-261ENST00000639486 HSP90AA1P07900 732 aaKnown RBP22.72■■□□□ 1.23
KCNMA1-261ENST00000639486 NPM2Q86SE8 214 aaKnown RBP22.71■■□□□ 1.23
KCNMA1-261ENST00000639486 UPF2Q9HAU5 1272 aaKnown RBP22.69■■□□□ 1.22
KCNMA1-261ENST00000639486 NEUROD1Q13562 356 aa22.66■■□□□ 1.22
KCNMA1-261ENST00000639486 FAM50AQ14320 339 aaKnown RBP22.66■■□□□ 1.22
KCNMA1-261ENST00000639486 NBR1Q14596 966 aa22.59■■□□□ 1.21
KCNMA1-261ENST00000639486 TRIM52Q96A61 297 aa22.54■■□□□ 1.2
KCNMA1-261ENST00000639486 TNNT2P45379 298 aaPredicted RBP22.54■■□□□ 1.2
KCNMA1-261ENST00000639486 FKBP8Q14318 412 aa22.52■■□□□ 1.2
KCNMA1-261ENST00000639486 NEFMP07197 916 aa22.51■■□□□ 1.19
KCNMA1-261ENST00000639486 BCL11AQ9H165 835 aa22.46■■□□□ 1.19
KCNMA1-261ENST00000639486 ZNF326Q5BKZ1 582 aaKnown RBP22.38■■□□□ 1.17
KCNMA1-261ENST00000639486 SLC24A1O60721 1099 aa22.35■■□□□ 1.17
KCNMA1-261ENST00000639486 TRIM44Q96DX7 344 aaPredicted RBP22.33■■□□□ 1.16
KCNMA1-261ENST00000639486 ANP32EQ9BTT0 268 aa22.32■■□□□ 1.16
KCNMA1-261ENST00000639486 ARXQ96QS3 562 aa22.29■■□□□ 1.16
KCNMA1-261ENST00000639486 CCDC136Q96JN2 1154 aa22.27■■□□□ 1.16
KCNMA1-261ENST00000639486 HNRNPUQ00839 825 aaKnown RBP eCLIP22.23■■□□□ 1.15
KCNMA1-261ENST00000639486 DDRGK1Q96HY6 314 aa22.22■■□□□ 1.15
KCNMA1-261ENST00000639486 SCAF1Q9H7N4 1312 aaKnown RBP22.21■■□□□ 1.15
KCNMA1-261ENST00000639486 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.19■■□□□ 1.14
KCNMA1-261ENST00000639486 DCAF1Q9Y4B6 1507 aa22.19■■□□□ 1.14
KCNMA1-261ENST00000639486 BECN1Q14457 450 aa22.17■■□□□ 1.14
KCNMA1-261ENST00000639486 ERICH6BQ5W0A0 696 aa22.15■■□□□ 1.14
KCNMA1-261ENST00000639486 CCDC180Q9P1Z9 1646 aa22.12■■□□□ 1.13
KCNMA1-261ENST00000639486 CDK11BP21127 795 aaKnown RBP22.11■■□□□ 1.13
KCNMA1-261ENST00000639486 TONSLQ96HA7 1378 aa22.07■■□□□ 1.12
KCNMA1-261ENST00000639486 GOLGA6L22H0YM25 854 aa22.06■■□□□ 1.12
KCNMA1-261ENST00000639486 FAM9BQ8IZU0 186 aa22.01■■□□□ 1.11
KCNMA1-261ENST00000639486 NAP1L5Q96NT1 182 aaPredicted RBP21.99■■□□□ 1.11
KCNMA1-261ENST00000639486 NCLP19338 710 aaKnown RBP21.98■■□□□ 1.11
KCNMA1-261ENST00000639486 DNTTIP2Q5QJE6 756 aaKnown RBP21.97■■□□□ 1.11
KCNMA1-261ENST00000639486 TMC1Q8TDI8 760 aa21.94■■□□□ 1.1
KCNMA1-261ENST00000639486 MYH16Q9H6N6 1097 aa21.92■■□□□ 1.1
KCNMA1-261ENST00000639486 PTMAP06454 111 aaKnown RBP21.91■■□□□ 1.1
KCNMA1-261ENST00000639486 DDX10Q13206 875 aaKnown RBP21.9■■□□□ 1.1
KCNMA1-261ENST00000639486 PPM1GO15355 546 aaPredicted RBP21.89■■□□□ 1.09
KCNMA1-261ENST00000639486 WDR43Q15061 677 aaKnown RBP eCLIP21.81■■□□□ 1.08
KCNMA1-261ENST00000639486 ZRSR1Q15695 479 aaKnown RBP21.8■■□□□ 1.08
KCNMA1-261ENST00000639486 RTN4Q9NQC3 1192 aaKnown RBP21.78■■□□□ 1.08
KCNMA1-261ENST00000639486 SALL2Q9Y467 1007 aaPredicted RBP21.76■■□□□ 1.07
KCNMA1-261ENST00000639486 NOP58Q9Y2X3 529 aaKnown RBP21.76■■□□□ 1.07
KCNMA1-261ENST00000639486 MRS2Q9HD23 443 aa21.75■■□□□ 1.07
KCNMA1-261ENST00000639486 CHAF1AQ13111 956 aaPredicted RBP21.74■■□□□ 1.07
KCNMA1-261ENST00000639486 IRX6P78412 446 aaPredicted RBP21.73■■□□□ 1.07
KCNMA1-261ENST00000639486 MIER1Q8N108 512 aa21.71■■□□□ 1.07
KCNMA1-261ENST00000639486 GOLGA6L6A8MZA4 724 aa21.71■■□□□ 1.07
KCNMA1-261ENST00000639486 CASC1Q6TDU7 716 aa21.71■■□□□ 1.07
KCNMA1-261ENST00000639486 MSNP26038 577 aaKnown RBP21.64■■□□□ 1.05
KCNMA1-261ENST00000639486 L1TD1Q5T7N2 865 aaKnown RBP21.62■■□□□ 1.05
KCNMA1-261ENST00000639486 NRDCO43847 1150 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms