RNA–Protein interactions for RNA: ENST00000639370.1

KCNMA1-258, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-258ENST00000639370 NISCHQ9Y2I1 1504 aa20.03■□□□□ 0.8
KCNMA1-258ENST00000639370 SHROOM4Q9ULL8 1493 aa17.61■□□□□ 0.41
KCNMA1-258ENST00000639370 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
KCNMA1-258ENST00000639370 DCAF8L2P0C7V8 631 aa17.09■□□□□ 0.33
KCNMA1-258ENST00000639370 ZCCHC6Q5VYS8 1495 aaKnown RBP16.94■□□□□ 0.3
KCNMA1-258ENST00000639370 CHIC1Q5VXU3 224 aa16.93■□□□□ 0.3
KCNMA1-258ENST00000639370 HRCP23327 699 aa16.88■□□□□ 0.29
KCNMA1-258ENST00000639370 PCGF6Q9BYE7 350 aa16.83■□□□□ 0.29
KCNMA1-258ENST00000639370 MYO15BQ96JP2 1530 aa16.76■□□□□ 0.27
KCNMA1-258ENST00000639370 CCDC180Q9P1Z9 1646 aa16.73■□□□□ 0.27
KCNMA1-258ENST00000639370 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
KCNMA1-258ENST00000639370 LOC105371045A0A1W2PR82 267 aa16.54■□□□□ 0.24
KCNMA1-258ENST00000639370 DCAF1Q9Y4B6 1507 aa16.39■□□□□ 0.21
KCNMA1-258ENST00000639370 TRIM26Q12899 539 aaPredicted RBP16.37■□□□□ 0.21
KCNMA1-258ENST00000639370 TRIM41Q8WV44 630 aa16.22■□□□□ 0.19
KCNMA1-258ENST00000639370 FAM9AQ8IZU1 332 aaPredicted RBP16.19■□□□□ 0.18
KCNMA1-258ENST00000639370 ZEB1P37275 1124 aaPredicted RBP16.17■□□□□ 0.18
KCNMA1-258ENST00000639370 EHMT2Q96KQ7 1210 aa16.14■□□□□ 0.17
KCNMA1-258ENST00000639370 RSF1Q96T23 1441 aaPredicted RBP16.02■□□□□ 0.15
KCNMA1-258ENST00000639370 ABCC9O60706 1549 aa16■□□□□ 0.15
KCNMA1-258ENST00000639370 SCRIBQ14160 1630 aa15.96■□□□□ 0.14
KCNMA1-258ENST00000639370 RB1CC1Q8TDY2 1594 aa15.82■□□□□ 0.12
KCNMA1-258ENST00000639370 PELP1Q8IZL8 1130 aaKnown RBP15.81■□□□□ 0.12
KCNMA1-258ENST00000639370 CCER1Q8TC90 406 aaPredicted RBP15.77■□□□□ 0.12
KCNMA1-258ENST00000639370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.73■□□□□ 0.11
KCNMA1-258ENST00000639370 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
KCNMA1-258ENST00000639370 CECR2Q9BXF3 1484 aa15.68■□□□□ 0.1
KCNMA1-258ENST00000639370 TTBK1Q5TCY1 1321 aaPredicted RBP15.66■□□□□ 0.1
KCNMA1-258ENST00000639370 MROH2BQ7Z745 1585 aa15.61■□□□□ 0.09
KCNMA1-258ENST00000639370 NACADO15069 1562 aa15.55■□□□□ 0.08
KCNMA1-258ENST00000639370 DIEXFQ68CQ4 756 aaKnown RBP15.54■□□□□ 0.08
KCNMA1-258ENST00000639370 CENPBP07199 599 aaPredicted RBP15.54■□□□□ 0.08
KCNMA1-258ENST00000639370 ACIN1Q9UKV3 1341 aaKnown RBP15.53■□□□□ 0.08
KCNMA1-258ENST00000639370 WIZO95785 1651 aa15.51■□□□□ 0.07
KCNMA1-258ENST00000639370 UBTFP17480 764 aaKnown RBP15.48■□□□□ 0.07
KCNMA1-258ENST00000639370 NEUROD1Q13562 356 aa15.47■□□□□ 0.07
KCNMA1-258ENST00000639370 GTF3C3Q9Y5Q9 886 aa15.42■□□□□ 0.06
KCNMA1-258ENST00000639370 BAZ1AQ9NRL2 1556 aaPredicted RBP15.38■□□□□ 0.05
KCNMA1-258ENST00000639370 CEP162Q5TB80 1403 aa15.37■□□□□ 0.05
KCNMA1-258ENST00000639370 CSRNP3Q8WYN3 585 aa15.37■□□□□ 0.05
KCNMA1-258ENST00000639370 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
KCNMA1-258ENST00000639370 ABCC8Q09428 1581 aa15.33■□□□□ 0.05
KCNMA1-258ENST00000639370 ZNF316A6NFI3 1004 aaPredicted RBP15.32■□□□□ 0.04
KCNMA1-258ENST00000639370 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
KCNMA1-258ENST00000639370 TNIKQ9UKE5 1360 aa15.31■□□□□ 0.04
KCNMA1-258ENST00000639370 YTHDC1Q96MU7 727 aaKnown RBP15.31■□□□□ 0.04
KCNMA1-258ENST00000639370 SOGA1O94964 1423 aa15.3■□□□□ 0.04
KCNMA1-258ENST00000639370 HNRNPUL2Q1KMD3 747 aaKnown RBP15.28■□□□□ 0.04
KCNMA1-258ENST00000639370 APLP2Q06481 763 aa15.27■□□□□ 0.03
KCNMA1-258ENST00000639370 TOP2AP11388 1531 aaKnown RBP15.25■□□□□ 0.03
KCNMA1-258ENST00000639370 EEA1Q15075 1411 aa15.23■□□□□ 0.03
KCNMA1-258ENST00000639370 EIF4G1Q04637 1599 aaKnown RBP15.21■□□□□ 0.03
KCNMA1-258ENST00000639370 RANGAP1P46060 587 aaPredicted RBP15.21■□□□□ 0.02
KCNMA1-258ENST00000639370 RUSC2Q8N2Y8 1516 aa15.17■□□□□ 0.02
KCNMA1-258ENST00000639370 GOLGA3Q08378 1498 aa15.17■□□□□ 0.02
KCNMA1-258ENST00000639370 SMARCA2P51531 1590 aa15.16■□□□□ 0.02
KCNMA1-258ENST00000639370 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
KCNMA1-258ENST00000639370 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
KCNMA1-258ENST00000639370 MIER1Q8N108 512 aa15.12■□□□□ 0.01
KCNMA1-258ENST00000639370 MYT1Q01538 1121 aa15.11■□□□□ 0.01
KCNMA1-258ENST00000639370 CLIP1P30622 1438 aa15.07■□□□□ 0
KCNMA1-258ENST00000639370 CEP164Q9UPV0 1460 aa15.05■□□□□ 0
KCNMA1-258ENST00000639370 VPS8Q8N3P4 1428 aa14.97□□□□□ -0.01
KCNMA1-258ENST00000639370 RAPGEF2Q9Y4G8 1499 aa14.89□□□□□ -0.03
KCNMA1-258ENST00000639370 KIF21BO75037 1637 aa14.88□□□□□ -0.03
KCNMA1-258ENST00000639370 SYNJ1O43426 1573 aa14.88□□□□□ -0.03
KCNMA1-258ENST00000639370 BAZ1BQ9UIG0 1483 aaKnown RBP14.86□□□□□ -0.03
KCNMA1-258ENST00000639370 ITGAEP38570 1179 aa14.84□□□□□ -0.03
KCNMA1-258ENST00000639370 CLSPNQ9HAW4 1339 aa14.84□□□□□ -0.03
KCNMA1-258ENST00000639370 UNC13AQ9UPW8 1703 aa14.84□□□□□ -0.03
KCNMA1-258ENST00000639370 ATAD2BQ9ULI0 1458 aa14.79□□□□□ -0.04
KCNMA1-258ENST00000639370 KANK4Q5T7N3 995 aaPredicted RBP14.79□□□□□ -0.04
KCNMA1-258ENST00000639370 DHX57Q6P158 1386 aaKnown RBP14.78□□□□□ -0.04
KCNMA1-258ENST00000639370 PEG3Q9GZU2 1588 aa14.75□□□□□ -0.05
KCNMA1-258ENST00000639370 BICRAQ9NZM4 1560 aa14.74□□□□□ -0.05
KCNMA1-258ENST00000639370 SUPT16HQ9Y5B9 1047 aaKnown RBP14.72□□□□□ -0.05
KCNMA1-258ENST00000639370 CCNB3Q8WWL7 1395 aa14.66□□□□□ -0.06
KCNMA1-258ENST00000639370 TOP2BQ02880 1626 aa14.65□□□□□ -0.06
KCNMA1-258ENST00000639370 KIF27Q86VH2 1401 aa14.65□□□□□ -0.06
KCNMA1-258ENST00000639370 ARAP1Q96P48 1450 aa14.65□□□□□ -0.06
KCNMA1-258ENST00000639370 PRXQ9BXM0 1461 aa14.64□□□□□ -0.07
KCNMA1-258ENST00000639370 ATP1B4Q9UN42 357 aaPredicted RBP14.64□□□□□ -0.07
KCNMA1-258ENST00000639370 ERICH3Q5RHP9 1530 aa14.62□□□□□ -0.07
KCNMA1-258ENST00000639370 FAM50AQ14320 339 aaKnown RBP14.61□□□□□ -0.07
KCNMA1-258ENST00000639370 RRBP1Q9P2E9 1410 aaKnown RBP14.6□□□□□ -0.07
KCNMA1-258ENST00000639370 BCANQ96GW7 911 aa14.58□□□□□ -0.08
KCNMA1-258ENST00000639370 DDX10Q13206 875 aaKnown RBP14.58□□□□□ -0.08
KCNMA1-258ENST00000639370 RAB3GAP2Q9H2M9 1393 aa14.56□□□□□ -0.08
KCNMA1-258ENST00000639370 KCNH8Q96L42 1107 aa14.55□□□□□ -0.08
KCNMA1-258ENST00000639370 NEFLP07196 543 aa14.54□□□□□ -0.08
KCNMA1-258ENST00000639370 TSHZ2Q9NRE2 1034 aa14.53□□□□□ -0.08
KCNMA1-258ENST00000639370 SIN3AQ96ST3 1273 aa14.52□□□□□ -0.09
KCNMA1-258ENST00000639370 BIVM-ERCC5R4GMW8 1640 aa14.52□□□□□ -0.09
KCNMA1-258ENST00000639370 FKBP8Q14318 412 aa14.52□□□□□ -0.09
KCNMA1-258ENST00000639370 P3H3Q8IVL6 736 aa14.52□□□□□ -0.09
KCNMA1-258ENST00000639370 ARHGAP35Q9NRY4 1499 aa14.51□□□□□ -0.09
KCNMA1-258ENST00000639370 CUX1P39880 1505 aa14.49□□□□□ -0.09
KCNMA1-258ENST00000639370 SETD5Q9C0A6 1442 aa14.49□□□□□ -0.09
KCNMA1-258ENST00000639370 HIRIP3Q9BW71 556 aaPredicted RBP14.47□□□□□ -0.09
KCNMA1-258ENST00000639370 CUX2O14529 1486 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 211.1 ms