RNA–Protein interactions for RNA: ENST00000638903.1

PAX6-243, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-243ENST00000638903 NISCHQ9Y2I1 1504 aa22.97■■□□□ 1.27
PAX6-243ENST00000638903 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
PAX6-243ENST00000638903 SUPT5HO00267 1087 aaKnown RBP19.72■□□□□ 0.75
PAX6-243ENST00000638903 ZCCHC6Q5VYS8 1495 aaKnown RBP19.51■□□□□ 0.71
PAX6-243ENST00000638903 HRCP23327 699 aa19.47■□□□□ 0.71
PAX6-243ENST00000638903 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
PAX6-243ENST00000638903 CHIC1Q5VXU3 224 aa19.36■□□□□ 0.69
PAX6-243ENST00000638903 CCDC180Q9P1Z9 1646 aa19.34■□□□□ 0.69
PAX6-243ENST00000638903 PCGF6Q9BYE7 350 aa19.2■□□□□ 0.66
PAX6-243ENST00000638903 PPARGC1BQ86YN6 1023 aaKnown RBP19■□□□□ 0.63
PAX6-243ENST00000638903 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
PAX6-243ENST00000638903 DCAF8L2P0C7V8 631 aa18.98■□□□□ 0.63
PAX6-243ENST00000638903 LOC105371045A0A1W2PR82 267 aa18.82■□□□□ 0.6
PAX6-243ENST00000638903 TRIM26Q12899 539 aaPredicted RBP18.72■□□□□ 0.59
PAX6-243ENST00000638903 ABCC9O60706 1549 aa18.57■□□□□ 0.56
PAX6-243ENST00000638903 ZEB1P37275 1124 aaPredicted RBP18.49■□□□□ 0.55
PAX6-243ENST00000638903 RSF1Q96T23 1441 aaPredicted RBP18.34■□□□□ 0.53
PAX6-243ENST00000638903 TRIM41Q8WV44 630 aa18.34■□□□□ 0.53
PAX6-243ENST00000638903 PELP1Q8IZL8 1130 aaKnown RBP18.32■□□□□ 0.52
PAX6-243ENST00000638903 RB1CC1Q8TDY2 1594 aa18.23■□□□□ 0.51
PAX6-243ENST00000638903 SCRIBQ14160 1630 aa18.22■□□□□ 0.51
PAX6-243ENST00000638903 FAM9AQ8IZU1 332 aaPredicted RBP18.21■□□□□ 0.51
PAX6-243ENST00000638903 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
PAX6-243ENST00000638903 NACADO15069 1562 aa18.09■□□□□ 0.49
PAX6-243ENST00000638903 EHMT2Q96KQ7 1210 aa18.07■□□□□ 0.48
PAX6-243ENST00000638903 CECR2Q9BXF3 1484 aa17.91■□□□□ 0.46
PAX6-243ENST00000638903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.9■□□□□ 0.46
PAX6-243ENST00000638903 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
PAX6-243ENST00000638903 CCER1Q8TC90 406 aaPredicted RBP17.88■□□□□ 0.45
PAX6-243ENST00000638903 ACIN1Q9UKV3 1341 aaKnown RBP17.88■□□□□ 0.45
PAX6-243ENST00000638903 WIZO95785 1651 aa17.84■□□□□ 0.45
PAX6-243ENST00000638903 NEUROD1Q13562 356 aa17.83■□□□□ 0.44
PAX6-243ENST00000638903 DIEXFQ68CQ4 756 aaKnown RBP17.76■□□□□ 0.43
PAX6-243ENST00000638903 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
PAX6-243ENST00000638903 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
PAX6-243ENST00000638903 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
PAX6-243ENST00000638903 GTF3C3Q9Y5Q9 886 aa17.7■□□□□ 0.42
PAX6-243ENST00000638903 WRNQ14191 1432 aaPredicted RBP eCLIP17.68■□□□□ 0.42
PAX6-243ENST00000638903 UNC13AQ9UPW8 1703 aa17.67■□□□□ 0.42
PAX6-243ENST00000638903 CEP162Q5TB80 1403 aa17.6■□□□□ 0.41
PAX6-243ENST00000638903 TTBK1Q5TCY1 1321 aaPredicted RBP17.6■□□□□ 0.41
PAX6-243ENST00000638903 ABCC8Q09428 1581 aa17.59■□□□□ 0.41
PAX6-243ENST00000638903 CCDC88BA6NC98 1476 aa17.58■□□□□ 0.4
PAX6-243ENST00000638903 TNIKQ9UKE5 1360 aa17.53■□□□□ 0.4
PAX6-243ENST00000638903 TOP2AP11388 1531 aaKnown RBP17.52■□□□□ 0.4
PAX6-243ENST00000638903 MYT1Q01538 1121 aa17.51■□□□□ 0.39
PAX6-243ENST00000638903 ZNF316A6NFI3 1004 aaPredicted RBP17.51■□□□□ 0.39
PAX6-243ENST00000638903 SOGA1O94964 1423 aa17.49■□□□□ 0.39
PAX6-243ENST00000638903 BICRAQ9NZM4 1560 aa17.47■□□□□ 0.39
PAX6-243ENST00000638903 SMARCA2P51531 1590 aa17.46■□□□□ 0.39
PAX6-243ENST00000638903 EEA1Q15075 1411 aa17.45■□□□□ 0.38
PAX6-243ENST00000638903 CSRNP3Q8WYN3 585 aa17.43■□□□□ 0.38
PAX6-243ENST00000638903 SMARCA4P51532 1647 aa17.42■□□□□ 0.38
PAX6-243ENST00000638903 UBTFP17480 764 aaKnown RBP17.41■□□□□ 0.38
PAX6-243ENST00000638903 RUSC2Q8N2Y8 1516 aa17.39■□□□□ 0.37
PAX6-243ENST00000638903 YTHDC1Q96MU7 727 aaKnown RBP17.37■□□□□ 0.37
PAX6-243ENST00000638903 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
PAX6-243ENST00000638903 MIER1Q8N108 512 aa17.32■□□□□ 0.36
PAX6-243ENST00000638903 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
PAX6-243ENST00000638903 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
PAX6-243ENST00000638903 CEP164Q9UPV0 1460 aa17.22■□□□□ 0.35
PAX6-243ENST00000638903 KIF21BO75037 1637 aa17.21■□□□□ 0.35
PAX6-243ENST00000638903 CLIP1P30622 1438 aa17.18■□□□□ 0.34
PAX6-243ENST00000638903 VPS8Q8N3P4 1428 aa17.16■□□□□ 0.34
PAX6-243ENST00000638903 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
PAX6-243ENST00000638903 APLP2Q06481 763 aa17.12■□□□□ 0.33
PAX6-243ENST00000638903 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
PAX6-243ENST00000638903 RAPGEF2Q9Y4G8 1499 aa17.05■□□□□ 0.32
PAX6-243ENST00000638903 PEG3Q9GZU2 1588 aa17.05■□□□□ 0.32
PAX6-243ENST00000638903 CLSPNQ9HAW4 1339 aa17.04■□□□□ 0.32
PAX6-243ENST00000638903 DHX57Q6P158 1386 aaKnown RBP16.98■□□□□ 0.31
PAX6-243ENST00000638903 RANGAP1P46060 587 aaPredicted RBP16.98■□□□□ 0.31
PAX6-243ENST00000638903 SUPT16HQ9Y5B9 1047 aaKnown RBP16.95■□□□□ 0.3
PAX6-243ENST00000638903 CC2D2AQ9P2K1 1620 aa16.89■□□□□ 0.29
PAX6-243ENST00000638903 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
PAX6-243ENST00000638903 ATAD2BQ9ULI0 1458 aa16.87■□□□□ 0.29
PAX6-243ENST00000638903 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
PAX6-243ENST00000638903 ARAP1Q96P48 1450 aa16.85■□□□□ 0.29
PAX6-243ENST00000638903 KANK4Q5T7N3 995 aaPredicted RBP16.83■□□□□ 0.29
PAX6-243ENST00000638903 DNAJC5BQ9UF47 199 aa16.83■□□□□ 0.28
PAX6-243ENST00000638903 RRBP1Q9P2E9 1410 aaKnown RBP16.82■□□□□ 0.28
PAX6-243ENST00000638903 PRXQ9BXM0 1461 aa16.82■□□□□ 0.28
PAX6-243ENST00000638903 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
PAX6-243ENST00000638903 CUX2O14529 1486 aa16.79■□□□□ 0.28
PAX6-243ENST00000638903 TSHZ2Q9NRE2 1034 aa16.77■□□□□ 0.28
PAX6-243ENST00000638903 CCNB3Q8WWL7 1395 aa16.74■□□□□ 0.27
PAX6-243ENST00000638903 SLC24A1O60721 1099 aa16.71■□□□□ 0.27
PAX6-243ENST00000638903 KCNH8Q96L42 1107 aa16.67■□□□□ 0.26
PAX6-243ENST00000638903 ITGAEP38570 1179 aa16.66■□□□□ 0.26
PAX6-243ENST00000638903 ANP32EQ9BTT0 268 aa16.66■□□□□ 0.26
PAX6-243ENST00000638903 KIF27Q86VH2 1401 aa16.65■□□□□ 0.26
PAX6-243ENST00000638903 NCAPD3P42695 1498 aa16.65■□□□□ 0.26
PAX6-243ENST00000638903 ARHGAP35Q9NRY4 1499 aa16.65■□□□□ 0.26
PAX6-243ENST00000638903 RAB3GAP2Q9H2M9 1393 aa16.65■□□□□ 0.26
PAX6-243ENST00000638903 MAPKBP1O60336 1514 aa16.65■□□□□ 0.26
PAX6-243ENST00000638903 HMGXB3Q12766 1538 aa16.63■□□□□ 0.25
PAX6-243ENST00000638903 CUX1P39880 1505 aa16.63■□□□□ 0.25
PAX6-243ENST00000638903 BCANQ96GW7 911 aa16.57■□□□□ 0.24
PAX6-243ENST00000638903 FKBP8Q14318 412 aa16.56■□□□□ 0.24
PAX6-243ENST00000638903 WDR97A6NE52 1622 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms