RNA–Protein interactions for RNA: ENST00000638083.1

CACNB4-272, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

Gene CACNB4, Length 6,849 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-272ENST00000638083 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
CACNB4-272ENST00000638083 NISCHQ9Y2I1 1504 aa13.35□□□□□ -0.27
CACNB4-272ENST00000638083 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
CACNB4-272ENST00000638083 EHMT2Q96KQ7 1210 aa12.78□□□□□ -0.36
CACNB4-272ENST00000638083 SHROOM4Q9ULL8 1493 aa12.71□□□□□ -0.37
CACNB4-272ENST00000638083 PELP1Q8IZL8 1130 aaKnown RBP12.46□□□□□ -0.41
CACNB4-272ENST00000638083 FAM9AQ8IZU1 332 aaPredicted RBP12.45□□□□□ -0.42
CACNB4-272ENST00000638083 TTBK1Q5TCY1 1321 aaPredicted RBP12.34□□□□□ -0.43
CACNB4-272ENST00000638083 APLP2Q06481 763 aa12.18□□□□□ -0.46
CACNB4-272ENST00000638083 ERICH6Q7L0X2 663 aa12.16□□□□□ -0.46
CACNB4-272ENST00000638083 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
CACNB4-272ENST00000638083 RANGAP1P46060 587 aaPredicted RBP12.08□□□□□ -0.48
CACNB4-272ENST00000638083 ATP1B4Q9UN42 357 aaPredicted RBP12.03□□□□□ -0.48
CACNB4-272ENST00000638083 ABCC9O60706 1549 aa12□□□□□ -0.49
CACNB4-272ENST00000638083 CENPBP07199 599 aaPredicted RBP11.96□□□□□ -0.49
CACNB4-272ENST00000638083 YTHDC1Q96MU7 727 aaKnown RBP11.96□□□□□ -0.5
CACNB4-272ENST00000638083 CCER1Q8TC90 406 aaPredicted RBP11.92□□□□□ -0.5
CACNB4-272ENST00000638083 MYT1Q01538 1121 aa11.85□□□□□ -0.51
CACNB4-272ENST00000638083 ZEB1P37275 1124 aaPredicted RBP11.83□□□□□ -0.52
CACNB4-272ENST00000638083 MYT1LQ9UL68 1186 aa11.82□□□□□ -0.52
CACNB4-272ENST00000638083 PABPN1Q86U42 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
CACNB4-272ENST00000638083 TRIM41Q8WV44 630 aa11.8□□□□□ -0.52
CACNB4-272ENST00000638083 PPARGC1BQ86YN6 1023 aaKnown RBP11.78□□□□□ -0.52
CACNB4-272ENST00000638083 NEFLP07196 543 aa11.76□□□□□ -0.53
CACNB4-272ENST00000638083 UBTFP17480 764 aaKnown RBP11.73□□□□□ -0.53
CACNB4-272ENST00000638083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
CACNB4-272ENST00000638083 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
CACNB4-272ENST00000638083 HRCP23327 699 aa11.66□□□□□ -0.54
CACNB4-272ENST00000638083 CHIC1Q5VXU3 224 aa11.63□□□□□ -0.55
CACNB4-272ENST00000638083 CNGB1Q14028 1251 aaPredicted RBP11.61□□□□□ -0.55
CACNB4-272ENST00000638083 TRIM26Q12899 539 aaPredicted RBP11.6□□□□□ -0.55
CACNB4-272ENST00000638083 POLR3GLQ9BT43 218 aa11.58□□□□□ -0.55
CACNB4-272ENST00000638083 DAXXQ9UER7 740 aaPredicted RBP11.54□□□□□ -0.56
CACNB4-272ENST00000638083 ITGAEP38570 1179 aa11.52□□□□□ -0.57
CACNB4-272ENST00000638083 FBLN2P98095 1184 aa11.48□□□□□ -0.57
CACNB4-272ENST00000638083 LOC105371045A0A1W2PR82 267 aa11.48□□□□□ -0.57
CACNB4-272ENST00000638083 SCRIBQ14160 1630 aa11.42□□□□□ -0.58
CACNB4-272ENST00000638083 CCDC180Q9P1Z9 1646 aa11.38□□□□□ -0.59
CACNB4-272ENST00000638083 SLC4A1APQ9BWU0 796 aaKnown RBP11.34□□□□□ -0.59
CACNB4-272ENST00000638083 RB1CC1Q8TDY2 1594 aa11.3□□□□□ -0.6
CACNB4-272ENST00000638083 CLSPNQ9HAW4 1339 aa11.28□□□□□ -0.6
CACNB4-272ENST00000638083 ZNF316A6NFI3 1004 aaPredicted RBP11.28□□□□□ -0.6
CACNB4-272ENST00000638083 RTL5Q5HYW3 569 aaPredicted RBP11.26□□□□□ -0.61
CACNB4-272ENST00000638083 BCANQ96GW7 911 aa11.25□□□□□ -0.61
CACNB4-272ENST00000638083 DIEXFQ68CQ4 756 aaKnown RBP11.19□□□□□ -0.62
CACNB4-272ENST00000638083 BCL11AQ9H165 835 aa11.17□□□□□ -0.62
CACNB4-272ENST00000638083 PLPPR3Q6T4P5 718 aa11.15□□□□□ -0.62
CACNB4-272ENST00000638083 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
CACNB4-272ENST00000638083 FAM50AQ14320 339 aaKnown RBP11.14□□□□□ -0.63
CACNB4-272ENST00000638083 ESF1Q9H501 851 aaKnown RBP11.12□□□□□ -0.63
CACNB4-272ENST00000638083 NEUROD1Q13562 356 aa11.1□□□□□ -0.63
CACNB4-272ENST00000638083 GTF3C3Q9Y5Q9 886 aa11.1□□□□□ -0.63
CACNB4-272ENST00000638083 ARID3CA6NKF2 412 aa11.1□□□□□ -0.63
CACNB4-272ENST00000638083 TRIM52Q96A61 297 aa11.09□□□□□ -0.63
CACNB4-272ENST00000638083 ERCC6Q03468 1493 aa11.09□□□□□ -0.63
CACNB4-272ENST00000638083 NACADO15069 1562 aa11.03□□□□□ -0.64
CACNB4-272ENST00000638083 P3H3Q8IVL6 736 aa11.03□□□□□ -0.64
CACNB4-272ENST00000638083 ZCCHC6Q5VYS8 1495 aaKnown RBP11.02□□□□□ -0.64
CACNB4-272ENST00000638083 ZNF326Q5BKZ1 582 aaKnown RBP11.02□□□□□ -0.65
CACNB4-272ENST00000638083 SLC24A1O60721 1099 aa11.01□□□□□ -0.65
CACNB4-272ENST00000638083 ZNF777Q9ULD5 760 aaPredicted RBP10.99□□□□□ -0.65
CACNB4-272ENST00000638083 CDK11AQ9UQ88 783 aaPredicted RBP10.99□□□□□ -0.65
CACNB4-272ENST00000638083 DCAF1Q9Y4B6 1507 aa10.98□□□□□ -0.65
CACNB4-272ENST00000638083 CHMP7Q8WUX9 453 aaPredicted RBP10.97□□□□□ -0.65
CACNB4-272ENST00000638083 STAG3Q9UJ98 1225 aa10.96□□□□□ -0.66
CACNB4-272ENST00000638083 ZBTB47Q9UFB7 747 aaPredicted RBP10.93□□□□□ -0.66
CACNB4-272ENST00000638083 NPM2Q86SE8 214 aaKnown RBP10.93□□□□□ -0.66
CACNB4-272ENST00000638083 ANP32CO43423 234 aa10.92□□□□□ -0.66
CACNB4-272ENST00000638083 EIF5BO60841 1220 aaKnown RBP10.91□□□□□ -0.66
CACNB4-272ENST00000638083 CSRNP3Q8WYN3 585 aa10.91□□□□□ -0.66
CACNB4-272ENST00000638083 CANXP27824 592 aaKnown RBP10.91□□□□□ -0.66
CACNB4-272ENST00000638083 ACIN1Q9UKV3 1341 aaKnown RBP10.9□□□□□ -0.66
CACNB4-272ENST00000638083 BAZ1BQ9UIG0 1483 aaKnown RBP10.87□□□□□ -0.67
CACNB4-272ENST00000638083 TRHP20396 242 aaPredicted RBP10.84□□□□□ -0.67
CACNB4-272ENST00000638083 CHGAP10645 457 aaKnown RBP10.84□□□□□ -0.67
CACNB4-272ENST00000638083 ANP32AP39687 249 aaKnown RBP10.81□□□□□ -0.68
CACNB4-272ENST00000638083 ARID4BQ4LE39 1312 aaPredicted RBP10.8□□□□□ -0.68
CACNB4-272ENST00000638083 ARXQ96QS3 562 aa10.78□□□□□ -0.68
CACNB4-272ENST00000638083 MYO15BQ96JP2 1530 aa10.77□□□□□ -0.68
CACNB4-272ENST00000638083 SCAF1Q9H7N4 1312 aaKnown RBP10.77□□□□□ -0.69
CACNB4-272ENST00000638083 FKBP8Q14318 412 aa10.75□□□□□ -0.69
CACNB4-272ENST00000638083 SALL2Q9Y467 1007 aaPredicted RBP10.75□□□□□ -0.69
CACNB4-272ENST00000638083 NBR1Q14596 966 aa10.74□□□□□ -0.69
CACNB4-272ENST00000638083 KCNH8Q96L42 1107 aa10.74□□□□□ -0.69
CACNB4-272ENST00000638083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.73□□□□□ -0.695e-10■■■■■ 31.7
CACNB4-272ENST00000638083 NEFMP07197 916 aa10.72□□□□□ -0.69
CACNB4-272ENST00000638083 HSP90AA1P07900 732 aaKnown RBP10.72□□□□□ -0.69
CACNB4-272ENST00000638083 ANP32BQ92688 251 aaKnown RBP10.68□□□□□ -0.7
CACNB4-272ENST00000638083 RSF1Q96T23 1441 aaPredicted RBP10.67□□□□□ -0.7
CACNB4-272ENST00000638083 FAM9BQ8IZU0 186 aa10.67□□□□□ -0.7
CACNB4-272ENST00000638083 EIF4G1Q04637 1599 aaKnown RBP10.66□□□□□ -0.7
CACNB4-272ENST00000638083 C14orf37Q86TY3 774 aa10.66□□□□□ -0.7
CACNB4-272ENST00000638083 HNRNPUQ00839 825 aaKnown RBP eCLIP10.64□□□□□ -0.71
CACNB4-272ENST00000638083 PPP1R15AO75807 674 aaPredicted RBP10.64□□□□□ -0.71
CACNB4-272ENST00000638083 ZBTB7CA1YPR0 619 aa10.63□□□□□ -0.71
CACNB4-272ENST00000638083 A0A0G2JS52 829 aa10.63□□□□□ -0.71
CACNB4-272ENST00000638083 IRX6P78412 446 aaPredicted RBP10.62□□□□□ -0.71
CACNB4-272ENST00000638083 SENP3Q9H4L4 574 aaPredicted RBP10.62□□□□□ -0.71
CACNB4-272ENST00000638083 BAZ1AQ9NRL2 1556 aaPredicted RBP10.61□□□□□ -0.71
CACNB4-272ENST00000638083 DDX10Q13206 875 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms