RNA–Protein interactions for RNA: ENST00000637848.1

EFR3A-208, Transcript of EFR3 homolog A, humanhuman

TSL 5 BASIC

Gene EFR3A, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-208ENST00000637848 AEBP2Q6ZN18 517 aaPredicted RBP10.6□□□□□ -0.71
EFR3A-208ENST00000637848 CHIC1Q5VXU3 224 aa10.01□□□□□ -0.81
EFR3A-208ENST00000637848 SENP3Q9H4L4 574 aaPredicted RBP9.18□□□□□ -0.94
EFR3A-208ENST00000637848 PHF23Q9BUL5 403 aaPredicted RBP8.98□□□□□ -0.97
EFR3A-208ENST00000637848 NISCHQ9Y2I1 1504 aa8.85□□□□□ -0.99
EFR3A-208ENST00000637848 FOXD1Q16676 465 aa8.52□□□□□ -1.04
EFR3A-208ENST00000637848 POTEDQ86YR6 584 aa8.33□□□□□ -1.08
EFR3A-208ENST00000637848 MSH5O43196 834 aa8.17□□□□□ -1.1
EFR3A-208ENST00000637848 PIAS4Q8N2W9 510 aaPredicted RBP7.9□□□□□ -1.15
EFR3A-208ENST00000637848 PLPPR3Q6T4P5 718 aa7.81□□□□□ -1.16
EFR3A-208ENST00000637848 CCDC180Q9P1Z9 1646 aa7.73□□□□□ -1.17
EFR3A-208ENST00000637848 PPP6R1Q9UPN7 881 aa7.73□□□□□ -1.17
EFR3A-208ENST00000637848 ADRA2BP18089 450 aa7.7□□□□□ -1.18
EFR3A-208ENST00000637848 ZCCHC6Q5VYS8 1495 aaKnown RBP7.48□□□□□ -1.21
EFR3A-208ENST00000637848 SHROOM4Q9ULL8 1493 aa7.37□□□□□ -1.23
EFR3A-208ENST00000637848 DCAF1Q9Y4B6 1507 aa7.32□□□□□ -1.24
EFR3A-208ENST00000637848 DMRT2Q9Y5R5 561 aa7.23□□□□□ -1.25
EFR3A-208ENST00000637848 SUPT5HO00267 1087 aaKnown RBP7.2□□□□□ -1.26
EFR3A-208ENST00000637848 DCAF8L2P0C7V8 631 aa7.2□□□□□ -1.26
EFR3A-208ENST00000637848 MYO15BQ96JP2 1530 aa7.19□□□□□ -1.26
EFR3A-208ENST00000637848 ABCC9O60706 1549 aa7.18□□□□□ -1.26
EFR3A-208ENST00000637848 SCAF1Q9H7N4 1312 aaKnown RBP7.18□□□□□ -1.26
EFR3A-208ENST00000637848 SLC24A1O60721 1099 aa7.17□□□□□ -1.26
EFR3A-208ENST00000637848 MAPK8IP2Q13387 824 aaPredicted RBP7.13□□□□□ -1.27
EFR3A-208ENST00000637848 NACADO15069 1562 aa7.13□□□□□ -1.27
EFR3A-208ENST00000637848 SCRIBQ14160 1630 aa7.12□□□□□ -1.27
EFR3A-208ENST00000637848 CACNB1Q02641 598 aaPredicted RBP7.11□□□□□ -1.27
EFR3A-208ENST00000637848 RB1CC1Q8TDY2 1594 aa7.06□□□□□ -1.28
EFR3A-208ENST00000637848 UNC13AQ9UPW8 1703 aa7.02□□□□□ -1.29
EFR3A-208ENST00000637848 RNF39Q9H2S5 420 aa6.9□□□□□ -1.31
EFR3A-208ENST00000637848 RSF1Q96T23 1441 aaPredicted RBP6.89□□□□□ -1.31
EFR3A-208ENST00000637848 DCAF8L1A6NGE4 600 aa6.88□□□□□ -1.31
EFR3A-208ENST00000637848 CECR2Q9BXF3 1484 aa6.87□□□□□ -1.31
EFR3A-208ENST00000637848 HOXD11P31277 338 aaPredicted RBP6.87□□□□□ -1.31
EFR3A-208ENST00000637848 BICRAQ9NZM4 1560 aa6.87□□□□□ -1.31
EFR3A-208ENST00000637848 MROH2BQ7Z745 1585 aa6.86□□□□□ -1.31
EFR3A-208ENST00000637848 EHMT2Q96KQ7 1210 aa6.86□□□□□ -1.31
EFR3A-208ENST00000637848 BAZ1AQ9NRL2 1556 aaPredicted RBP6.84□□□□□ -1.31
EFR3A-208ENST00000637848 WIZO95785 1651 aa6.84□□□□□ -1.31
EFR3A-208ENST00000637848 C1QBPQ07021 282 aaKnown RBP6.83□□□□□ -1.32
EFR3A-208ENST00000637848 SMARCA4P51532 1647 aa6.82□□□□□ -1.32
EFR3A-208ENST00000637848 LOC105371045A0A1W2PR82 267 aa6.82□□□□□ -1.32
EFR3A-208ENST00000637848 DNAJC5BQ9UF47 199 aa6.78□□□□□ -1.32
EFR3A-208ENST00000637848 PPP4R3CPQ6ZMV5 832 aa6.78□□□□□ -1.32
EFR3A-208ENST00000637848 PCGF6Q9BYE7 350 aa6.76□□□□□ -1.33
EFR3A-208ENST00000637848 RNF216Q9NWF9 866 aaPredicted RBP6.76□□□□□ -1.33
EFR3A-208ENST00000637848 TOP2AP11388 1531 aaKnown RBP6.75□□□□□ -1.33
EFR3A-208ENST00000637848 CNKSR2Q8WXI2 1034 aa6.75□□□□□ -1.33
EFR3A-208ENST00000637848 PABPN1Q86U42 306 aaKnown RBP eCLIP6.74□□□□□ -1.33
EFR3A-208ENST00000637848 PEG3Q9GZU2 1588 aa6.72□□□□□ -1.33
EFR3A-208ENST00000637848 EIF4G1Q04637 1599 aaKnown RBP6.72□□□□□ -1.33
EFR3A-208ENST00000637848 SMARCA2P51531 1590 aa6.7□□□□□ -1.34
EFR3A-208ENST00000637848 HRCP23327 699 aa6.7□□□□□ -1.34
EFR3A-208ENST00000637848 PPARGC1BQ86YN6 1023 aaKnown RBP6.69□□□□□ -1.34
EFR3A-208ENST00000637848 FAM9AQ8IZU1 332 aaPredicted RBP6.68□□□□□ -1.34
EFR3A-208ENST00000637848 CCDC88BA6NC98 1476 aa6.65□□□□□ -1.35
EFR3A-208ENST00000637848 ATAD2BQ9ULI0 1458 aa6.64□□□□□ -1.35
EFR3A-208ENST00000637848 TRIM41Q8WV44 630 aa6.64□□□□□ -1.35
EFR3A-208ENST00000637848 PRKCSHP14314 528 aaPredicted RBP6.62□□□□□ -1.35
EFR3A-208ENST00000637848 BAZ1BQ9UIG0 1483 aaKnown RBP6.62□□□□□ -1.35
EFR3A-208ENST00000637848 HMGXB3Q12766 1538 aa6.6□□□□□ -1.35
EFR3A-208ENST00000637848 ABCC8Q09428 1581 aa6.59□□□□□ -1.36
EFR3A-208ENST00000637848 MYT1Q01538 1121 aa6.58□□□□□ -1.36
EFR3A-208ENST00000637848 DAXXQ9UER7 740 aaPredicted RBP6.58□□□□□ -1.36
EFR3A-208ENST00000637848 NCAPD3P42695 1498 aa6.55□□□□□ -1.36
EFR3A-208ENST00000637848 TRIM26Q12899 539 aaPredicted RBP6.55□□□□□ -1.36
EFR3A-208ENST00000637848 PRDM2Q13029 1718 aa6.53□□□□□ -1.36
EFR3A-208ENST00000637848 CC2D2AQ9P2K1 1620 aa6.53□□□□□ -1.36
EFR3A-208ENST00000637848 PELP1Q8IZL8 1130 aaKnown RBP6.53□□□□□ -1.36
EFR3A-208ENST00000637848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.52□□□□□ -1.37
EFR3A-208ENST00000637848 APLP2Q06481 763 aa6.51□□□□□ -1.37
EFR3A-208ENST00000637848 TTBK1Q5TCY1 1321 aaPredicted RBP6.51□□□□□ -1.37
EFR3A-208ENST00000637848 NCBP3Q53F19 620 aaKnown RBP6.5□□□□□ -1.37
EFR3A-208ENST00000637848 SYNJ1O43426 1573 aa6.5□□□□□ -1.37
EFR3A-208ENST00000637848 POTEHQ6S545 545 aa6.49□□□□□ -1.37
EFR3A-208ENST00000637848 WRNQ14191 1432 aaPredicted RBP eCLIP6.48□□□□□ -1.37
EFR3A-208ENST00000637848 BIVM-ERCC5R4GMW8 1640 aa6.47□□□□□ -1.37
EFR3A-208ENST00000637848 TOP2BQ02880 1626 aa6.46□□□□□ -1.38
EFR3A-208ENST00000637848 CFTRP13569 1480 aa6.45□□□□□ -1.38
EFR3A-208ENST00000637848 RTN4Q9NQC3 1192 aaKnown RBP6.44□□□□□ -1.38
EFR3A-208ENST00000637848 RUSC2Q8N2Y8 1516 aa6.43□□□□□ -1.38
EFR3A-208ENST00000637848 SOGA1O94964 1423 aa6.43□□□□□ -1.38
EFR3A-208ENST00000637848 EEA1Q15075 1411 aa6.42□□□□□ -1.38
EFR3A-208ENST00000637848 CUX1P39880 1505 aa6.41□□□□□ -1.38
EFR3A-208ENST00000637848 ERICH6Q7L0X2 663 aa6.4□□□□□ -1.39
EFR3A-208ENST00000637848 KIF21BO75037 1637 aa6.39□□□□□ -1.39
EFR3A-208ENST00000637848 KCNA4P22459 653 aa6.39□□□□□ -1.39
EFR3A-208ENST00000637848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.39□□□□□ -1.39
EFR3A-208ENST00000637848 CADPSQ9ULU8 1353 aa6.38□□□□□ -1.39
EFR3A-208ENST00000637848 CSRNP3Q8WYN3 585 aa6.37□□□□□ -1.39
EFR3A-208ENST00000637848 GOLGA3Q08378 1498 aa6.36□□□□□ -1.39
EFR3A-208ENST00000637848 DSG3P32926 999 aa6.36□□□□□ -1.39
EFR3A-208ENST00000637848 LAMC3Q9Y6N6 1575 aa6.36□□□□□ -1.39
EFR3A-208ENST00000637848 NESP48681 1621 aa6.35□□□□□ -1.39
EFR3A-208ENST00000637848 CEP164Q9UPV0 1460 aa6.35□□□□□ -1.39
EFR3A-208ENST00000637848 CEP162Q5TB80 1403 aa6.34□□□□□ -1.39
EFR3A-208ENST00000637848 FANCD2Q9BXW9 1451 aa6.34□□□□□ -1.39
EFR3A-208ENST00000637848 UBTFP17480 764 aaKnown RBP6.34□□□□□ -1.39
EFR3A-208ENST00000637848 KIF21AQ7Z4S6 1674 aa6.33□□□□□ -1.4
EFR3A-208ENST00000637848 DNMBPQ6XZF7 1577 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms