RNA–Protein interactions for RNA: ENST00000636617.1

CACNB4-229, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5 BASIC

Gene CACNB4, Length 5,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-229ENST00000636617 PELP1Q8IZL8 1130 aaKnown RBP10.5□□□□□ -0.73
CACNB4-229ENST00000636617 MYT1Q01538 1121 aa10.41□□□□□ -0.74
CACNB4-229ENST00000636617 DCAF8L2P0C7V8 631 aa10.24□□□□□ -0.77
CACNB4-229ENST00000636617 SUPT5HO00267 1087 aaKnown RBP10.18□□□□□ -0.78
CACNB4-229ENST00000636617 CENPBP07199 599 aaPredicted RBP10.09□□□□□ -0.79
CACNB4-229ENST00000636617 ERICH6Q7L0X2 663 aa10.03□□□□□ -0.8
CACNB4-229ENST00000636617 ZEB1P37275 1124 aaPredicted RBP10.01□□□□□ -0.81
CACNB4-229ENST00000636617 CCER1Q8TC90 406 aaPredicted RBP9.98□□□□□ -0.81
CACNB4-229ENST00000636617 PCGF6Q9BYE7 350 aa9.97□□□□□ -0.81
CACNB4-229ENST00000636617 NISCHQ9Y2I1 1504 aa9.86□□□□□ -0.83
CACNB4-229ENST00000636617 SHROOM4Q9ULL8 1493 aa9.86□□□□□ -0.83
CACNB4-229ENST00000636617 EHMT2Q96KQ7 1210 aa9.8□□□□□ -0.84
CACNB4-229ENST00000636617 APLP2Q06481 763 aa9.78□□□□□ -0.84
CACNB4-229ENST00000636617 NEFLP07196 543 aa9.73□□□□□ -0.85
CACNB4-229ENST00000636617 HRCP23327 699 aa9.72□□□□□ -0.85
CACNB4-229ENST00000636617 YTHDC1Q96MU7 727 aaKnown RBP9.67□□□□□ -0.86
CACNB4-229ENST00000636617 TTBK1Q5TCY1 1321 aaPredicted RBP9.61□□□□□ -0.87
CACNB4-229ENST00000636617 FAM9AQ8IZU1 332 aaPredicted RBP9.58□□□□□ -0.88
CACNB4-229ENST00000636617 TRIM26Q12899 539 aaPredicted RBP9.56□□□□□ -0.88
CACNB4-229ENST00000636617 TRIM41Q8WV44 630 aa9.45□□□□□ -0.9
CACNB4-229ENST00000636617 DAXXQ9UER7 740 aaPredicted RBP9.44□□□□□ -0.9
CACNB4-229ENST00000636617 RTL5Q5HYW3 569 aaPredicted RBP9.41□□□□□ -0.9
CACNB4-229ENST00000636617 PPARGC1BQ86YN6 1023 aaKnown RBP9.39□□□□□ -0.91
CACNB4-229ENST00000636617 DIEXFQ68CQ4 756 aaKnown RBP9.33□□□□□ -0.92
CACNB4-229ENST00000636617 GTF3C3Q9Y5Q9 886 aa9.33□□□□□ -0.92
CACNB4-229ENST00000636617 UBTFP17480 764 aaKnown RBP9.29□□□□□ -0.92
CACNB4-229ENST00000636617 RANGAP1P46060 587 aaPredicted RBP9.27□□□□□ -0.93
CACNB4-229ENST00000636617 ZNF316A6NFI3 1004 aaPredicted RBP9.24□□□□□ -0.93
CACNB4-229ENST00000636617 ACIN1Q9UKV3 1341 aaKnown RBP9.23□□□□□ -0.93
CACNB4-229ENST00000636617 ATP1B4Q9UN42 357 aaPredicted RBP9.18□□□□□ -0.94
CACNB4-229ENST00000636617 CHIC1Q5VXU3 224 aa9.17□□□□□ -0.94
CACNB4-229ENST00000636617 CDK11AQ9UQ88 783 aaPredicted RBP9.17□□□□□ -0.94
CACNB4-229ENST00000636617 LOC105371045A0A1W2PR82 267 aa9.14□□□□□ -0.95
CACNB4-229ENST00000636617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.14□□□□□ -0.95
CACNB4-229ENST00000636617 CLSPNQ9HAW4 1339 aa9.14□□□□□ -0.95
CACNB4-229ENST00000636617 MYT1LQ9UL68 1186 aa9.13□□□□□ -0.95
CACNB4-229ENST00000636617 BCANQ96GW7 911 aa9.12□□□□□ -0.95
CACNB4-229ENST00000636617 HNRNPUL2Q1KMD3 747 aaKnown RBP9.1□□□□□ -0.95
CACNB4-229ENST00000636617 GLIPR1L2Q4G1C9 344 aa9.09□□□□□ -0.95
CACNB4-229ENST00000636617 POLR3GLQ9BT43 218 aa9.05□□□□□ -0.96
CACNB4-229ENST00000636617 EIF5BO60841 1220 aaKnown RBP9.04□□□□□ -0.96
CACNB4-229ENST00000636617 ANP32AP39687 249 aaKnown RBP9.03□□□□□ -0.96
CACNB4-229ENST00000636617 ITGAEP38570 1179 aa9.03□□□□□ -0.96
CACNB4-229ENST00000636617 ANP32CO43423 234 aa9□□□□□ -0.97
CACNB4-229ENST00000636617 SCAF1Q9H7N4 1312 aaKnown RBP8.99□□□□□ -0.97
CACNB4-229ENST00000636617 CNGB1Q14028 1251 aaPredicted RBP8.94□□□□□ -0.98
CACNB4-229ENST00000636617 NEUROD1Q13562 356 aa8.92□□□□□ -0.98
CACNB4-229ENST00000636617 FKBP8Q14318 412 aa8.9□□□□□ -0.98
CACNB4-229ENST00000636617 ANP32EQ9BTT0 268 aa8.89□□□□□ -0.99
CACNB4-229ENST00000636617 DCAF1Q9Y4B6 1507 aa8.87□□□□□ -0.99
CACNB4-229ENST00000636617 ANP32BQ92688 251 aaKnown RBP8.86□□□□□ -0.99
CACNB4-229ENST00000636617 NPM2Q86SE8 214 aaKnown RBP8.86□□□□□ -0.99
CACNB4-229ENST00000636617 NBR1Q14596 966 aa8.83□□□□□ -1
CACNB4-229ENST00000636617 ZBTB47Q9UFB7 747 aaPredicted RBP8.82□□□□□ -1
CACNB4-229ENST00000636617 FAM50AQ14320 339 aaKnown RBP8.8□□□□□ -1
CACNB4-229ENST00000636617 BCL11AQ9H165 835 aa8.79□□□□□ -1
CACNB4-229ENST00000636617 CANXP27824 592 aaKnown RBP8.77□□□□□ -1.01
CACNB4-229ENST00000636617 TRIM52Q96A61 297 aa8.75□□□□□ -1.01
CACNB4-229ENST00000636617 SLC4A1APQ9BWU0 796 aaKnown RBP8.75□□□□□ -1.01
CACNB4-229ENST00000636617 UPF2Q9HAU5 1272 aaKnown RBP8.73□□□□□ -1.01
CACNB4-229ENST00000636617 HNRNPUQ00839 825 aaKnown RBP eCLIP8.72□□□□□ -1.01
CACNB4-229ENST00000636617 CCDC136Q96JN2 1154 aa8.7□□□□□ -1.02
CACNB4-229ENST00000636617 DDRGK1Q96HY6 314 aa8.69□□□□□ -1.02
CACNB4-229ENST00000636617 HSP90AA1P07900 732 aaKnown RBP8.69□□□□□ -1.02
CACNB4-229ENST00000636617 MIER1Q8N108 512 aa8.68□□□□□ -1.02
CACNB4-229ENST00000636617 TNNT2P45379 298 aaPredicted RBP8.68□□□□□ -1.02
CACNB4-229ENST00000636617 ERICH6BQ5W0A0 696 aa8.66□□□□□ -1.02
CACNB4-229ENST00000636617 ZNF326Q5BKZ1 582 aaKnown RBP8.65□□□□□ -1.02
CACNB4-229ENST00000636617 CCDC180Q9P1Z9 1646 aa8.64□□□□□ -1.03
CACNB4-229ENST00000636617 PPM1GO15355 546 aaPredicted RBP8.63□□□□□ -1.03
CACNB4-229ENST00000636617 DDX10Q13206 875 aaKnown RBP8.63□□□□□ -1.03
CACNB4-229ENST00000636617 NEFMP07197 916 aa8.63□□□□□ -1.03
CACNB4-229ENST00000636617 TRIM44Q96DX7 344 aaPredicted RBP8.63□□□□□ -1.03
CACNB4-229ENST00000636617 ARXQ96QS3 562 aa8.62□□□□□ -1.03
CACNB4-229ENST00000636617 FAM9BQ8IZU0 186 aa8.61□□□□□ -1.03
CACNB4-229ENST00000636617 TONSLQ96HA7 1378 aa8.61□□□□□ -1.03
CACNB4-229ENST00000636617 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.6□□□□□ -1.03
CACNB4-229ENST00000636617 BECN1Q14457 450 aa8.6□□□□□ -1.03
CACNB4-229ENST00000636617 NOP58Q9Y2X3 529 aaKnown RBP8.6□□□□□ -1.03
CACNB4-229ENST00000636617 NAP1L5Q96NT1 182 aaPredicted RBP8.59□□□□□ -1.03
CACNB4-229ENST00000636617 RTN4Q9NQC3 1192 aaKnown RBP8.59□□□□□ -1.03
CACNB4-229ENST00000636617 DEKP35659 375 aaKnown RBP8.58□□□□□ -1.04
CACNB4-229ENST00000636617 SUPT16HQ9Y5B9 1047 aaKnown RBP8.58□□□□□ -1.04
CACNB4-229ENST00000636617 IRX6P78412 446 aaPredicted RBP8.58□□□□□ -1.04
CACNB4-229ENST00000636617 MRS2Q9HD23 443 aa8.54□□□□□ -1.04
CACNB4-229ENST00000636617 CSRNP3Q8WYN3 585 aa8.54□□□□□ -1.04
CACNB4-229ENST00000636617 GOLGA6L22H0YM25 854 aa8.52□□□□□ -1.04
CACNB4-229ENST00000636617 TMC1Q8TDI8 760 aa8.52□□□□□ -1.04
CACNB4-229ENST00000636617 CDK11BP21127 795 aaKnown RBP8.52□□□□□ -1.05
CACNB4-229ENST00000636617 PPP4R2Q9NY27 417 aa8.52□□□□□ -1.05
CACNB4-229ENST00000636617 NCLP19338 710 aaKnown RBP8.5□□□□□ -1.05
CACNB4-229ENST00000636617 LAS1LQ9Y4W2 734 aaKnown RBP8.5□□□□□ -1.05
CACNB4-229ENST00000636617 RBM19Q9Y4C8 960 aaKnown RBP8.48□□□□□ -1.05
CACNB4-229ENST00000636617 L1TD1Q5T7N2 865 aaKnown RBP8.48□□□□□ -1.05
CACNB4-229ENST00000636617 PTMAP06454 111 aaKnown RBP8.47□□□□□ -1.05
CACNB4-229ENST00000636617 SALL2Q9Y467 1007 aaPredicted RBP8.47□□□□□ -1.05
CACNB4-229ENST00000636617 DNTTIP2Q5QJE6 756 aaKnown RBP8.46□□□□□ -1.05
CACNB4-229ENST00000636617 WDR43Q15061 677 aaKnown RBP eCLIP8.45□□□□□ -1.06
CACNB4-229ENST00000636617 MYO15BQ96JP2 1530 aa8.45□□□□□ -1.06
CACNB4-229ENST00000636617 SLC24A1O60721 1099 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms