RNA–Protein interactions for RNA: ENST00000636071.2

SCN2A-209, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-209ENST00000636071 PELP1Q8IZL8 1130 aaKnown RBP10.65□□□□□ -0.7
SCN2A-209ENST00000636071 MYT1Q01538 1121 aa10.29□□□□□ -0.76
SCN2A-209ENST00000636071 CCER1Q8TC90 406 aaPredicted RBP10.1□□□□□ -0.79
SCN2A-209ENST00000636071 FAM9AQ8IZU1 332 aaPredicted RBP9.96□□□□□ -0.81
SCN2A-209ENST00000636071 DCAF8L2P0C7V8 631 aa9.91□□□□□ -0.82
SCN2A-209ENST00000636071 YTHDC1Q96MU7 727 aaKnown RBP9.85□□□□□ -0.83
SCN2A-209ENST00000636071 ZEB1P37275 1124 aaPredicted RBP9.84□□□□□ -0.83
SCN2A-209ENST00000636071 APLP2Q06481 763 aa9.84□□□□□ -0.83
SCN2A-209ENST00000636071 CENPBP07199 599 aaPredicted RBP9.83□□□□□ -0.84
SCN2A-209ENST00000636071 ERICH6Q7L0X2 663 aa9.81□□□□□ -0.84
SCN2A-209ENST00000636071 NEFLP07196 543 aa9.61□□□□□ -0.87
SCN2A-209ENST00000636071 NISCHQ9Y2I1 1504 aa9.55□□□□□ -0.88
SCN2A-209ENST00000636071 SUPT5HO00267 1087 aaKnown RBP9.54□□□□□ -0.88
SCN2A-209ENST00000636071 TTBK1Q5TCY1 1321 aaPredicted RBP9.45□□□□□ -0.9
SCN2A-209ENST00000636071 DAXXQ9UER7 740 aaPredicted RBP9.43□□□□□ -0.9
SCN2A-209ENST00000636071 RTL5Q5HYW3 569 aaPredicted RBP9.23□□□□□ -0.93
SCN2A-209ENST00000636071 PCGF6Q9BYE7 350 aa9.16□□□□□ -0.94
SCN2A-209ENST00000636071 MYT1LQ9UL68 1186 aa9.13□□□□□ -0.95
SCN2A-209ENST00000636071 ZNF316A6NFI3 1004 aaPredicted RBP9.13□□□□□ -0.95
SCN2A-209ENST00000636071 CLSPNQ9HAW4 1339 aa9.12□□□□□ -0.95
SCN2A-209ENST00000636071 TRIM41Q8WV44 630 aa9.12□□□□□ -0.95
SCN2A-209ENST00000636071 SHROOM4Q9ULL8 1493 aa9.09□□□□□ -0.95
SCN2A-209ENST00000636071 TRIM26Q12899 539 aaPredicted RBP9.06□□□□□ -0.96
SCN2A-209ENST00000636071 GLIPR1L2Q4G1C9 344 aa9.03□□□□□ -0.96
SCN2A-209ENST00000636071 UBTFP17480 764 aaKnown RBP9.02□□□□□ -0.97
SCN2A-209ENST00000636071 NEFMP07197 916 aa9.02□□□□□ -0.97
SCN2A-209ENST00000636071 ZBTB47Q9UFB7 747 aaPredicted RBP8.95□□□□□ -0.98
SCN2A-209ENST00000636071 ANP32BQ92688 251 aaKnown RBP8.92□□□□□ -0.98
SCN2A-209ENST00000636071 EHMT2Q96KQ7 1210 aa8.9□□□□□ -0.98
SCN2A-209ENST00000636071 HRCP23327 699 aa8.9□□□□□ -0.98
SCN2A-209ENST00000636071 ATP1B4Q9UN42 357 aaPredicted RBP8.9□□□□□ -0.98
SCN2A-209ENST00000636071 CDK11AQ9UQ88 783 aaPredicted RBP8.86□□□□□ -0.99
SCN2A-209ENST00000636071 EIF5BO60841 1220 aaKnown RBP8.82□□□□□ -1
SCN2A-209ENST00000636071 ACIN1Q9UKV3 1341 aaKnown RBP8.81□□□□□ -1
SCN2A-209ENST00000636071 ANP32AP39687 249 aaKnown RBP8.81□□□□□ -1
SCN2A-209ENST00000636071 ANP32EQ9BTT0 268 aa8.8□□□□□ -1
SCN2A-209ENST00000636071 ANP32CO43423 234 aa8.75□□□□□ -1.01
SCN2A-209ENST00000636071 UPF2Q9HAU5 1272 aaKnown RBP8.75□□□□□ -1.01
SCN2A-209ENST00000636071 DIEXFQ68CQ4 756 aaKnown RBP8.74□□□□□ -1.01
SCN2A-209ENST00000636071 RANGAP1P46060 587 aaPredicted RBP8.68□□□□□ -1.02
SCN2A-209ENST00000636071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.67□□□□□ -1.02
SCN2A-209ENST00000636071 CANXP27824 592 aaKnown RBP8.67□□□□□ -1.02
SCN2A-209ENST00000636071 HNRNPUL2Q1KMD3 747 aaKnown RBP8.67□□□□□ -1.02
SCN2A-209ENST00000636071 TNNT2P45379 298 aaPredicted RBP8.67□□□□□ -1.02
SCN2A-209ENST00000636071 POLR3GLQ9BT43 218 aa8.66□□□□□ -1.02
SCN2A-209ENST00000636071 TRIM44Q96DX7 344 aaPredicted RBP8.63□□□□□ -1.03
SCN2A-209ENST00000636071 CDK11BP21127 795 aaKnown RBP8.63□□□□□ -1.03
SCN2A-209ENST00000636071 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.62□□□□□ -1.03
SCN2A-209ENST00000636071 SLC4A1APQ9BWU0 796 aaKnown RBP8.61□□□□□ -1.03
SCN2A-209ENST00000636071 HSP90AA1P07900 732 aaKnown RBP8.6□□□□□ -1.03
SCN2A-209ENST00000636071 NCLP19338 710 aaKnown RBP8.58□□□□□ -1.04
SCN2A-209ENST00000636071 DDRGK1Q96HY6 314 aa8.56□□□□□ -1.04
SCN2A-209ENST00000636071 GOLGA6L22H0YM25 854 aa8.54□□□□□ -1.04
SCN2A-209ENST00000636071 BECN1Q14457 450 aa8.53□□□□□ -1.04
SCN2A-209ENST00000636071 ARID4BQ4LE39 1312 aaPredicted RBP8.52□□□□□ -1.05
SCN2A-209ENST00000636071 ITGAEP38570 1179 aa8.52□□□□□ -1.05
SCN2A-209ENST00000636071 TRIM52Q96A61 297 aa8.52□□□□□ -1.05
SCN2A-209ENST00000636071 NEUROD1Q13562 356 aa8.5□□□□□ -1.05
SCN2A-209ENST00000636071 L1TD1Q5T7N2 865 aaKnown RBP8.5□□□□□ -1.05
SCN2A-209ENST00000636071 ERICH6BQ5W0A0 696 aa8.49□□□□□ -1.05
SCN2A-209ENST00000636071 CHIC1Q5VXU3 224 aa8.49□□□□□ -1.05
SCN2A-209ENST00000636071 CHMP4BQ9H444 224 aaKnown RBP8.49□□□□□ -1.05
SCN2A-209ENST00000636071 NRDCO43847 1150 aa8.49□□□□□ -1.05
SCN2A-209ENST00000636071 GTF3C3Q9Y5Q9 886 aa8.49□□□□□ -1.05
SCN2A-209ENST00000636071 CFAP44Q96MT7 982 aa8.48□□□□□ -1.05
SCN2A-209ENST00000636071 MYH16Q9H6N6 1097 aa8.48□□□□□ -1.05
SCN2A-209ENST00000636071 FAM50AQ14320 339 aaKnown RBP8.48□□□□□ -1.05
SCN2A-209ENST00000636071 GOLGA6L6A8MZA4 724 aa8.47□□□□□ -1.05
SCN2A-209ENST00000636071 USP35Q9P2H5 1018 aa8.44□□□□□ -1.06
SCN2A-209ENST00000636071 SLC24A1O60721 1099 aa8.44□□□□□ -1.06
SCN2A-209ENST00000636071 PPM1GO15355 546 aaPredicted RBP8.43□□□□□ -1.06
SCN2A-209ENST00000636071 ZRSR1Q15695 479 aaKnown RBP8.43□□□□□ -1.06
SCN2A-209ENST00000636071 PTMSP20962 102 aa8.42□□□□□ -1.06
SCN2A-209ENST00000636071 TONSLQ96HA7 1378 aa8.42□□□□□ -1.06
SCN2A-209ENST00000636071 CASC1Q6TDU7 716 aa8.41□□□□□ -1.06
SCN2A-209ENST00000636071 DCAF1Q9Y4B6 1507 aa8.39□□□□□ -1.07
SCN2A-209ENST00000636071 MS4A1P11836 297 aa8.38□□□□□ -1.07
SCN2A-209ENST00000636071 CCDC136Q96JN2 1154 aa8.37□□□□□ -1.07
SCN2A-209ENST00000636071 CDCA8Q53HL2 280 aa8.37□□□□□ -1.07
SCN2A-209ENST00000636071 ESF1Q9H501 851 aaKnown RBP8.37□□□□□ -1.07
SCN2A-209ENST00000636071 CHAF1AQ13111 956 aaPredicted RBP8.36□□□□□ -1.07
SCN2A-209ENST00000636071 WDR43Q15061 677 aaKnown RBP eCLIP8.34□□□□□ -1.07
SCN2A-209ENST00000636071 HAP1P54257 671 aaPredicted RBP8.33□□□□□ -1.08
SCN2A-209ENST00000636071 NPM2Q86SE8 214 aaKnown RBP8.32□□□□□ -1.08
SCN2A-209ENST00000636071 BCANQ96GW7 911 aa8.31□□□□□ -1.08
SCN2A-209ENST00000636071 ZNF326Q5BKZ1 582 aaKnown RBP8.31□□□□□ -1.08
SCN2A-209ENST00000636071 EEA1Q15075 1411 aa8.3□□□□□ -1.08
SCN2A-209ENST00000636071 PTMAP06454 111 aaKnown RBP8.3□□□□□ -1.08
SCN2A-209ENST00000636071 TMC1Q8TDI8 760 aa8.3□□□□□ -1.08
SCN2A-209ENST00000636071 CHMP4AQ9BY43 222 aa8.3□□□□□ -1.08
SCN2A-209ENST00000636071 PPARGC1BQ86YN6 1023 aaKnown RBP8.29□□□□□ -1.08
SCN2A-209ENST00000636071 PNNQ9H307 717 aaKnown RBP8.28□□□□□ -1.08
SCN2A-209ENST00000636071 CFAP53Q96M91 514 aa8.27□□□□□ -1.08
SCN2A-209ENST00000636071 HNRNPUQ00839 825 aaKnown RBP eCLIP8.27□□□□□ -1.09
SCN2A-209ENST00000636071 FKBP8Q14318 412 aa8.27□□□□□ -1.09
SCN2A-209ENST00000636071 CNGB1Q14028 1251 aaPredicted RBP8.27□□□□□ -1.09
SCN2A-209ENST00000636071 CSRNP3Q8WYN3 585 aa8.25□□□□□ -1.09
SCN2A-209ENST00000636071 RSF1Q96T23 1441 aaPredicted RBP8.25□□□□□ -1.09
SCN2A-209ENST00000636071 CCDC34Q96HJ3 373 aa8.25□□□□□ -1.09
SCN2A-209ENST00000636071 HTATSF1O43719 755 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms