RNA–Protein interactions for RNA: ENST00000632009.1

LPIN3-205, Transcript of lipin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LPIN3, Length 4,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN3-205ENST00000632009 NISCHQ9Y2I1 1504 aa22.92■■□□□ 1.26
LPIN3-205ENST00000632009 DCAF8L2P0C7V8 631 aa20.15■□□□□ 0.82
LPIN3-205ENST00000632009 CCDC180Q9P1Z9 1646 aa19.88■□□□□ 0.77
LPIN3-205ENST00000632009 ABCC9O60706 1549 aa19.75■□□□□ 0.75
LPIN3-205ENST00000632009 SHROOM4Q9ULL8 1493 aa19.08■□□□□ 0.64
LPIN3-205ENST00000632009 ZCCHC6Q5VYS8 1495 aaKnown RBP19.07■□□□□ 0.64
LPIN3-205ENST00000632009 RB1CC1Q8TDY2 1594 aa18.88■□□□□ 0.61
LPIN3-205ENST00000632009 NACADO15069 1562 aa18.87■□□□□ 0.61
LPIN3-205ENST00000632009 PABPN1Q86U42 306 aaKnown RBP eCLIP18.78■□□□□ 0.68e-8■■■■□ 21.3
LPIN3-205ENST00000632009 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
LPIN3-205ENST00000632009 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.57
LPIN3-205ENST00000632009 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
LPIN3-205ENST00000632009 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
LPIN3-205ENST00000632009 BICRAQ9NZM4 1560 aa17.95■□□□□ 0.46
LPIN3-205ENST00000632009 UNC13AQ9UPW8 1703 aa17.9■□□□□ 0.46
LPIN3-205ENST00000632009 CECR2Q9BXF3 1484 aa17.9■□□□□ 0.46
LPIN3-205ENST00000632009 BAZ1AQ9NRL2 1556 aaPredicted RBP17.81■□□□□ 0.44
LPIN3-205ENST00000632009 RSF1Q96T23 1441 aaPredicted RBP17.74■□□□□ 0.43
LPIN3-205ENST00000632009 EIF4G1Q04637 1599 aaKnown RBP17.7■□□□□ 0.42
LPIN3-205ENST00000632009 MROH2BQ7Z745 1585 aa17.69■□□□□ 0.42
LPIN3-205ENST00000632009 BAZ1BQ9UIG0 1483 aaKnown RBP17.64■□□□□ 0.41
LPIN3-205ENST00000632009 DNAJC5BQ9UF47 199 aa17.63■□□□□ 0.41
LPIN3-205ENST00000632009 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
LPIN3-205ENST00000632009 SMARCA2P51531 1590 aa17.59■□□□□ 0.41
LPIN3-205ENST00000632009 ATAD2BQ9ULI0 1458 aa17.58■□□□□ 0.4
LPIN3-205ENST00000632009 CC2D2AQ9P2K1 1620 aa17.53■□□□□ 0.4
LPIN3-205ENST00000632009 WIZO95785 1651 aa17.46■□□□□ 0.38
LPIN3-205ENST00000632009 NCAPD3P42695 1498 aa17.45■□□□□ 0.38
LPIN3-205ENST00000632009 TOP2AP11388 1531 aaKnown RBP17.32■□□□□ 0.36
LPIN3-205ENST00000632009 HMGXB3Q12766 1538 aa17.27■□□□□ 0.36
LPIN3-205ENST00000632009 TRIM41Q8WV44 630 aa17.27■□□□□ 0.36
LPIN3-205ENST00000632009 CCDC88BA6NC98 1476 aa17.25■□□□□ 0.35
LPIN3-205ENST00000632009 PEG3Q9GZU2 1588 aa17.2■□□□□ 0.34
LPIN3-205ENST00000632009 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
LPIN3-205ENST00000632009 ERCC6Q03468 1493 aa17.19■□□□□ 0.34
LPIN3-205ENST00000632009 PDS5BQ9NTI5 1447 aa17.13■□□□□ 0.33
LPIN3-205ENST00000632009 FAM9AQ8IZU1 332 aaPredicted RBP17.09■□□□□ 0.33
LPIN3-205ENST00000632009 NESP48681 1621 aa17.03■□□□□ 0.32
LPIN3-205ENST00000632009 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
LPIN3-205ENST00000632009 EHMT2Q96KQ7 1210 aa17.01■□□□□ 0.31
LPIN3-205ENST00000632009 CFTRP13569 1480 aa16.96■□□□□ 0.31
LPIN3-205ENST00000632009 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
LPIN3-205ENST00000632009 CEP164Q9UPV0 1460 aa16.94■□□□□ 0.3
LPIN3-205ENST00000632009 WRNQ14191 1432 aaPredicted RBP eCLIP16.91■□□□□ 0.3
LPIN3-205ENST00000632009 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
LPIN3-205ENST00000632009 FBLN2P98095 1184 aa16.81■□□□□ 0.28
LPIN3-205ENST00000632009 ABCC8Q09428 1581 aa16.76■□□□□ 0.27
LPIN3-205ENST00000632009 UBTFP17480 764 aaKnown RBP16.75■□□□□ 0.27
LPIN3-205ENST00000632009 MRC2Q9UBG0 1479 aa16.73■□□□□ 0.27
LPIN3-205ENST00000632009 RANGAP1P46060 587 aaPredicted RBP16.72■□□□□ 0.27
LPIN3-205ENST00000632009 SOGA1O94964 1423 aa16.71■□□□□ 0.27
LPIN3-205ENST00000632009 PCGF6Q9BYE7 350 aa16.66■□□□□ 0.26
LPIN3-205ENST00000632009 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
LPIN3-205ENST00000632009 TDRD9Q8NDG6 1382 aaKnown RBP16.65■□□□□ 0.26
LPIN3-205ENST00000632009 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
LPIN3-205ENST00000632009 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
LPIN3-205ENST00000632009 CUX2O14529 1486 aa16.61■□□□□ 0.25
LPIN3-205ENST00000632009 KIF27Q86VH2 1401 aa16.6■□□□□ 0.25
LPIN3-205ENST00000632009 FGD5Q6ZNL6 1462 aa16.6■□□□□ 0.25
LPIN3-205ENST00000632009 URB2Q14146 1524 aaKnown RBP16.56■□□□□ 0.24
LPIN3-205ENST00000632009 RAD54L2Q9Y4B4 1467 aa16.56■□□□□ 0.24
LPIN3-205ENST00000632009 DNMBPQ6XZF7 1577 aa16.55■□□□□ 0.24
LPIN3-205ENST00000632009 CUX1P39880 1505 aa16.55■□□□□ 0.24
LPIN3-205ENST00000632009 KIF21AQ7Z4S6 1674 aa16.53■□□□□ 0.24
LPIN3-205ENST00000632009 TTBK1Q5TCY1 1321 aaPredicted RBP16.52■□□□□ 0.24
LPIN3-205ENST00000632009 POLA1P09884 1462 aaPredicted RBP16.52■□□□□ 0.24
LPIN3-205ENST00000632009 LOC105371045A0A1W2PR82 267 aa16.5■□□□□ 0.23
LPIN3-205ENST00000632009 IFT140Q96RY7 1462 aa16.5■□□□□ 0.23
LPIN3-205ENST00000632009 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
LPIN3-205ENST00000632009 AQRO60306 1485 aaKnown RBP eCLIP16.47■□□□□ 0.234e-7■■■■■ 31.9
LPIN3-205ENST00000632009 EEA1Q15075 1411 aa16.46■□□□□ 0.23
LPIN3-205ENST00000632009 TOP2BQ02880 1626 aa16.45■□□□□ 0.22
LPIN3-205ENST00000632009 ATP1B4Q9UN42 357 aaPredicted RBP16.44■□□□□ 0.22
LPIN3-205ENST00000632009 GAPVD1Q14C86 1478 aa16.43■□□□□ 0.22
LPIN3-205ENST00000632009 CARMIL1Q5VZK9 1371 aa16.42■□□□□ 0.22
LPIN3-205ENST00000632009 WDR62O43379 1518 aa16.4■□□□□ 0.22
LPIN3-205ENST00000632009 PRDM2Q13029 1718 aa16.4■□□□□ 0.22
LPIN3-205ENST00000632009 APLP2Q06481 763 aa16.38■□□□□ 0.21
LPIN3-205ENST00000632009 GRIN2BQ13224 1484 aa16.34■□□□□ 0.21
LPIN3-205ENST00000632009 ZNF608Q9ULD9 1512 aaPredicted RBP16.34■□□□□ 0.21
LPIN3-205ENST00000632009 RUSC2Q8N2Y8 1516 aa16.33■□□□□ 0.21
LPIN3-205ENST00000632009 ABCA10Q8WWZ4 1543 aa16.33■□□□□ 0.2
LPIN3-205ENST00000632009 IGF1RP08069 1367 aa16.33■□□□□ 0.2
LPIN3-205ENST00000632009 P3H3Q8IVL6 736 aa16.32■□□□□ 0.2
LPIN3-205ENST00000632009 OSCARQ8IYS5 282 aa16.32■□□□□ 0.2
LPIN3-205ENST00000632009 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
LPIN3-205ENST00000632009 BIVM-ERCC5R4GMW8 1640 aa16.29■□□□□ 0.2
LPIN3-205ENST00000632009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
LPIN3-205ENST00000632009 HNRNPUL2Q1KMD3 747 aaKnown RBP16.28■□□□□ 0.2
LPIN3-205ENST00000632009 SNAPC4Q5SXM2 1469 aa16.24■□□□□ 0.19
LPIN3-205ENST00000632009 GOLGA3Q08378 1498 aa16.24■□□□□ 0.19
LPIN3-205ENST00000632009 FHAD1B1AJZ9 1412 aa16.23■□□□□ 0.19
LPIN3-205ENST00000632009 RAPGEF2Q9Y4G8 1499 aa16.23■□□□□ 0.19
LPIN3-205ENST00000632009 PPARGC1BQ86YN6 1023 aaKnown RBP16.17■□□□□ 0.18
LPIN3-205ENST00000632009 JPH4Q96JJ6 628 aa16.16■□□□□ 0.18
LPIN3-205ENST00000632009 MAGI1Q96QZ7 1491 aaPredicted RBP16.15■□□□□ 0.18
LPIN3-205ENST00000632009 ARID3CA6NKF2 412 aa16.13■□□□□ 0.17
LPIN3-205ENST00000632009 SYNJ2O15056 1496 aa16.13■□□□□ 0.17
LPIN3-205ENST00000632009 ERICH3Q5RHP9 1530 aa16.13■□□□□ 0.17
LPIN3-205ENST00000632009 TARBP1Q13395 1621 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms