RNA–Protein interactions for RNA: ENST00000624668.3

ATRX-217, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-217ENST00000624668 NISCHQ9Y2I1 1504 aa38.98■■■■□ 3.83
ATRX-217ENST00000624668 CCDC180Q9P1Z9 1646 aa34.88■■■■□ 3.17
ATRX-217ENST00000624668 ABCC9O60706 1549 aa34.81■■■■□ 3.16
ATRX-217ENST00000624668 RB1CC1Q8TDY2 1594 aa33.13■■■□□ 2.89
ATRX-217ENST00000624668 NACADO15069 1562 aa32.94■■■□□ 2.86
ATRX-217ENST00000624668 DCAF8L2P0C7V8 631 aa32.77■■■□□ 2.84
ATRX-217ENST00000624668 DNAJC5BQ9UF47 199 aa32.6■■■□□ 2.81
ATRX-217ENST00000624668 MYO15BQ96JP2 1530 aa32.55■■■□□ 2.8
ATRX-217ENST00000624668 UNC13AQ9UPW8 1703 aa32.44■■■□□ 2.78
ATRX-217ENST00000624668 PABPN1Q86U42 306 aaKnown RBP eCLIP32.43■■■□□ 2.78
ATRX-217ENST00000624668 ZCCHC6Q5VYS8 1495 aaKnown RBP32.35■■■□□ 2.77
ATRX-217ENST00000624668 BICRAQ9NZM4 1560 aa32.26■■■□□ 2.75
ATRX-217ENST00000624668 DCAF1Q9Y4B6 1507 aa32.18■■■□□ 2.74
ATRX-217ENST00000624668 SCRIBQ14160 1630 aa31.84■■■□□ 2.69
ATRX-217ENST00000624668 SHROOM4Q9ULL8 1493 aa31.73■■■□□ 2.67
ATRX-217ENST00000624668 CC2D2AQ9P2K1 1620 aa31.44■■■□□ 2.62
ATRX-217ENST00000624668 EIF4G1Q04637 1599 aaKnown RBP31.41■■■□□ 2.62
ATRX-217ENST00000624668 CECR2Q9BXF3 1484 aa31.32■■■□□ 2.6
ATRX-217ENST00000624668 NCAPD3P42695 1498 aa30.44■■■□□ 2.46
ATRX-217ENST00000624668 ATAD2BQ9ULI0 1458 aa30.38■■■□□ 2.45
ATRX-217ENST00000624668 SMARCA4P51532 1647 aa30.38■■■□□ 2.45
ATRX-217ENST00000624668 SMARCA2P51531 1590 aa30.25■■■□□ 2.43
ATRX-217ENST00000624668 HMGXB3Q12766 1538 aa30.22■■■□□ 2.43
ATRX-217ENST00000624668 BAZ1AQ9NRL2 1556 aaPredicted RBP30.21■■■□□ 2.43
ATRX-217ENST00000624668 PEG3Q9GZU2 1588 aa30.09■■■□□ 2.41
ATRX-217ENST00000624668 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
ATRX-217ENST00000624668 BAZ1BQ9UIG0 1483 aaKnown RBP30.06■■■□□ 2.4
ATRX-217ENST00000624668 ERCC6Q03468 1493 aa29.98■■■□□ 2.39
ATRX-217ENST00000624668 NESP48681 1621 aa29.97■■■□□ 2.39
ATRX-217ENST00000624668 CUX2O14529 1486 aa29.89■■■□□ 2.38
ATRX-217ENST00000624668 DNAJC5Q9H3Z4 198 aa29.75■■■□□ 2.35
ATRX-217ENST00000624668 WIZO95785 1651 aa29.7■■■□□ 2.35
ATRX-217ENST00000624668 LAMC3Q9Y6N6 1575 aa29.7■■■□□ 2.35
ATRX-217ENST00000624668 THOC2Q8NI27 1593 aaKnown RBP29.63■■■□□ 2.33
ATRX-217ENST00000624668 KIF21AQ7Z4S6 1674 aa29.56■■■□□ 2.32
ATRX-217ENST00000624668 CADPSQ9ULU8 1353 aa29.51■■■□□ 2.31
ATRX-217ENST00000624668 PDS5BQ9NTI5 1447 aa29.5■■■□□ 2.31
ATRX-217ENST00000624668 RSF1Q96T23 1441 aaPredicted RBP29.48■■■□□ 2.31
ATRX-217ENST00000624668 TOP2AP11388 1531 aaKnown RBP29.31■■■□□ 2.28
ATRX-217ENST00000624668 MRC2Q9UBG0 1479 aa29.28■■■□□ 2.28
ATRX-217ENST00000624668 WDR62O43379 1518 aa29.23■■■□□ 2.27
ATRX-217ENST00000624668 CFTRP13569 1480 aa29.22■■■□□ 2.27
ATRX-217ENST00000624668 FANCD2Q9BXW9 1451 aa29.18■■■□□ 2.26
ATRX-217ENST00000624668 CEP164Q9UPV0 1460 aa29.18■■■□□ 2.26
ATRX-217ENST00000624668 CCDC88BA6NC98 1476 aa29■■■□□ 2.23
ATRX-217ENST00000624668 URB2Q14146 1524 aaKnown RBP28.98■■■□□ 2.23
ATRX-217ENST00000624668 PRDM2Q13029 1718 aa28.89■■■□□ 2.22
ATRX-217ENST00000624668 TOPBP1Q92547 1522 aa28.66■■■□□ 2.18
ATRX-217ENST00000624668 ZNF608Q9ULD9 1512 aaPredicted RBP28.61■■■□□ 2.17
ATRX-217ENST00000624668 IFT140Q96RY7 1462 aa28.59■■■□□ 2.17
ATRX-217ENST00000624668 DNMBPQ6XZF7 1577 aa28.54■■■□□ 2.16
ATRX-217ENST00000624668 OSCARQ8IYS5 282 aa28.52■■■□□ 2.16
ATRX-217ENST00000624668 ABCC8Q09428 1581 aa28.52■■■□□ 2.16
ATRX-217ENST00000624668 TRIM41Q8WV44 630 aa28.48■■■□□ 2.15
ATRX-217ENST00000624668 EIF4G3O43432 1585 aaKnown RBP28.43■■■□□ 2.14
ATRX-217ENST00000624668 TARBP1Q13395 1621 aaKnown RBP28.41■■■□□ 2.14
ATRX-217ENST00000624668 POLA1P09884 1462 aaPredicted RBP28.39■■■□□ 2.13
ATRX-217ENST00000624668 AQRO60306 1485 aaKnown RBP eCLIP28.34■■■□□ 2.13
ATRX-217ENST00000624668 RAD54L2Q9Y4B4 1467 aa28.29■■■□□ 2.12
ATRX-217ENST00000624668 CUX1P39880 1505 aa28.23■■■□□ 2.11
ATRX-217ENST00000624668 FGD5Q6ZNL6 1462 aa28.22■■■□□ 2.11
ATRX-217ENST00000624668 SUPT5HO00267 1087 aaKnown RBP28.22■■■□□ 2.11
ATRX-217ENST00000624668 SOGA1O94964 1423 aa28.22■■■□□ 2.11
ATRX-217ENST00000624668 RIMBP3CA6NJZ7 1639 aa28.21■■■□□ 2.11
ATRX-217ENST00000624668 RIMBP3BA6NNM3 1639 aa28.21■■■□□ 2.11
ATRX-217ENST00000624668 RIMBP3Q9UFD9 1639 aa28.21■■■□□ 2.11
ATRX-217ENST00000624668 TDRD9Q8NDG6 1382 aaKnown RBP28.18■■■□□ 2.1
ATRX-217ENST00000624668 CHD1O14646 1710 aa28.18■■■□□ 2.1
ATRX-217ENST00000624668 ARHGEF11O15085 1522 aa28.13■■■□□ 2.09
ATRX-217ENST00000624668 WDR97A6NE52 1622 aa28.05■■■□□ 2.08
ATRX-217ENST00000624668 FBLN2P98095 1184 aa28.05■■■□□ 2.08
ATRX-217ENST00000624668 SNAPC4Q5SXM2 1469 aa28.04■■■□□ 2.08
ATRX-217ENST00000624668 GRIN2BQ13224 1484 aa27.95■■■□□ 2.07
ATRX-217ENST00000624668 MAGI1Q96QZ7 1491 aaPredicted RBP27.94■■■□□ 2.06
ATRX-217ENST00000624668 ABCA10Q8WWZ4 1543 aa27.89■■■□□ 2.06
ATRX-217ENST00000624668 ARAP1Q96P48 1450 aa27.89■■■□□ 2.05
ATRX-217ENST00000624668 CLASP1Q7Z460 1538 aa27.88■■■□□ 2.05
ATRX-217ENST00000624668 CYB5RLQ6IPT4 315 aa27.88■■■□□ 2.05
ATRX-217ENST00000624668 GAPVD1Q14C86 1478 aa27.88■■■□□ 2.05
ATRX-217ENST00000624668 ABCA5Q8WWZ7 1642 aa27.87■■■□□ 2.05
ATRX-217ENST00000624668 PBRM1Q86U86 1689 aa27.87■■■□□ 2.05
ATRX-217ENST00000624668 CHMP7Q8WUX9 453 aaPredicted RBP27.86■■■□□ 2.05
ATRX-217ENST00000624668 SYNJ2O15056 1496 aa27.86■■■□□ 2.05
ATRX-217ENST00000624668 SYNJ1O43426 1573 aa27.81■■■□□ 2.04
ATRX-217ENST00000624668 BIVM-ERCC5R4GMW8 1640 aa27.79■■■□□ 2.04
ATRX-217ENST00000624668 TOP2BQ02880 1626 aa27.78■■■□□ 2.04
ATRX-217ENST00000624668 WRNQ14191 1432 aaPredicted RBP eCLIP27.77■■■□□ 2.04
ATRX-217ENST00000624668 ADAMTS12P58397 1594 aa27.64■■■□□ 2.01
ATRX-217ENST00000624668 GRIN2AQ12879 1464 aa27.62■■■□□ 2.01
ATRX-217ENST00000624668 CEP170Q5SW79 1584 aa27.55■■■□□ 2
ATRX-217ENST00000624668 ERICH3Q5RHP9 1530 aa27.53■■■□□ 2
ATRX-217ENST00000624668 FHAD1B1AJZ9 1412 aa27.53■■■□□ 2
ATRX-217ENST00000624668 NUP160Q12769 1436 aa27.53■■■□□ 2
ATRX-217ENST00000624668 ERCC6L2Q5T890 1561 aa27.5■■□□□ 1.99
ATRX-217ENST00000624668 TRHP20396 242 aaPredicted RBP27.48■■□□□ 1.99
ATRX-217ENST00000624668 SHROOM2Q13796 1616 aa27.41■■□□□ 1.98
ATRX-217ENST00000624668 RUSC2Q8N2Y8 1516 aa27.26■■□□□ 1.95
ATRX-217ENST00000624668 PRG4Q92954 1404 aaPredicted RBP27.24■■□□□ 1.95
ATRX-217ENST00000624668 IGF1RP08069 1367 aa27.23■■□□□ 1.95
ATRX-217ENST00000624668 JPH4Q96JJ6 628 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms