RNA–Protein interactions for RNA: ENST00000624668.3

ATRX-217, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 583 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-217ENST00000624668 SF3B1O75533 1304 aaKnown RBP eCLIP17.12■□□□□ 0.336e-6■■■■■ 63.9
ATRX-217ENST00000624668 EIF3HO15372 352 aaKnown RBP eCLIP14.43□□□□□ -0.12e-9■■■■■ 41.7
ATRX-217ENST00000624668 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.88■□□□□ 0.459e-13■■■■■ 40.6
ATRX-217ENST00000624668 GTF2F1P35269 517 aaKnown RBP eCLIP17.6■□□□□ 0.416e-9■■■■■ 35.5
ATRX-217ENST00000624668 QKIQ96PU8 341 aaKnown RBP eCLIP15.27■□□□□ 0.041e-9■■■■■ 33.4
ATRX-217ENST00000624668 PCBP1Q15365 356 aaKnown RBP eCLIP17.26■□□□□ 0.358e-6■■■■■ 32.8
ATRX-217ENST00000624668 HNRNPMP52272 730 aaKnown RBP eCLIP25.06■■□□□ 1.61e-7■■■■■ 32.5
ATRX-217ENST00000624668 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.66□□□□□ -0.069e-9■■■■■ 30.4
ATRX-217ENST00000624668 HNRNPCP07910 306 aaKnown RBP eCLIP11.25□□□□□ -0.612e-8■■■■□ 26.4
ATRX-217ENST00000624668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.39■■□□□ 1.016e-9■■■■□ 25.8
ATRX-217ENST00000624668 ILF3Q12906 894 aaKnown RBP eCLIP15.48■□□□□ 0.072e-8■■■■□ 25.6
ATRX-217ENST00000624668 ZNF622Q969S3 477 aaKnown RBP eCLIP20.62■□□□□ 0.891e-11■■■■□ 24.3
ATRX-217ENST00000624668 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.96■□□□□ 0.158e-6■■■■□ 23.2
ATRX-217ENST00000624668 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.04■□□□□ 0.329e-12■■■■□ 22.3
ATRX-217ENST00000624668 PCBP2Q15366 365 aaKnown RBP eCLIP14.33□□□□□ -0.128e-7■■■■□ 21.7
ATRX-217ENST00000624668 CSTF2P33240 577 aaKnown RBP eCLIP15.35■□□□□ 0.053e-6■■■□□ 18
ATRX-217ENST00000624668 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.53□□□□□ -0.084e-7■■■□□ 17.8
ATRX-217ENST00000624668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.23■■□□□ 1.473e-7■■■□□ 15.9
ATRX-217ENST00000624668 KHSRPQ92945 711 aaKnown RBP eCLIP17.68■□□□□ 0.421e-6■■□□□ 12
ATRX-217ENST00000624668 HNRNPLP14866 589 aaKnown RBP eCLIP16.48■□□□□ 0.233e-6■□□□□ 11.3
ATRX-217ENST00000624668 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.39■□□□□ 0.051e-7■□□□□ 11.2
ATRX-217ENST00000624668 FMR1Q06787 632 aaKnown RBP eCLIP20.14■□□□□ 0.813e-7■□□□□ 10.6
Retrieved 22 of 22 RNA–protein pairs in 23.9 ms