RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 MYT1Q01538 1121 aa6.33□□□□□ -1.4
ATRX-212ENST00000623706 PELP1Q8IZL8 1130 aaKnown RBP5.9□□□□□ -1.46
ATRX-212ENST00000623706 RANGAP1P46060 587 aaPredicted RBP5.83□□□□□ -1.48
ATRX-212ENST00000623706 ERICH6Q7L0X2 663 aa5.81□□□□□ -1.48
ATRX-212ENST00000623706 TTBK1Q5TCY1 1321 aaPredicted RBP5.7□□□□□ -1.5
ATRX-212ENST00000623706 DCAF8L2P0C7V8 631 aa5.59□□□□□ -1.51
ATRX-212ENST00000623706 CCER1Q8TC90 406 aaPredicted RBP5.59□□□□□ -1.51
ATRX-212ENST00000623706 EHMT2Q96KQ7 1210 aa5.57□□□□□ -1.52
ATRX-212ENST00000623706 MYT1LQ9UL68 1186 aa5.54□□□□□ -1.52
ATRX-212ENST00000623706 YTHDC1Q96MU7 727 aaKnown RBP5.48□□□□□ -1.53
ATRX-212ENST00000623706 POLR3GLQ9BT43 218 aa5.41□□□□□ -1.54
ATRX-212ENST00000623706 EIF5BO60841 1220 aaKnown RBP5.32□□□□□ -1.56
ATRX-212ENST00000623706 DAXXQ9UER7 740 aaPredicted RBP5.3□□□□□ -1.56
ATRX-212ENST00000623706 GLIPR1L2Q4G1C9 344 aa5.24□□□□□ -1.57
ATRX-212ENST00000623706 ATP1B4Q9UN42 357 aaPredicted RBP5.23□□□□□ -1.57
ATRX-212ENST00000623706 RTL5Q5HYW3 569 aaPredicted RBP5.23□□□□□ -1.57
ATRX-212ENST00000623706 AMER1Q5JTC6 1135 aaPredicted RBP5.22□□□□□ -1.57
ATRX-212ENST00000623706 CENPBP07199 599 aaPredicted RBP5.18□□□□□ -1.58
ATRX-212ENST00000623706 NEFLP07196 543 aa5.17□□□□□ -1.58
ATRX-212ENST00000623706 ZNF316A6NFI3 1004 aaPredicted RBP5.13□□□□□ -1.59
ATRX-212ENST00000623706 FAM9AQ8IZU1 332 aaPredicted RBP5.12□□□□□ -1.59
ATRX-212ENST00000623706 CHIC1Q5VXU3 224 aa5.08□□□□□ -1.6
ATRX-212ENST00000623706 ZNF326Q5BKZ1 582 aaKnown RBP5.07□□□□□ -1.6
ATRX-212ENST00000623706 SLC24A1O60721 1099 aa5.07□□□□□ -1.6
ATRX-212ENST00000623706 CDK11BP21127 795 aaKnown RBP5.06□□□□□ -1.6
ATRX-212ENST00000623706 TNNT2P45379 298 aaPredicted RBP5.06□□□□□ -1.6
ATRX-212ENST00000623706 CALRP27797 417 aaKnown RBP5.05□□□□□ -1.6
ATRX-212ENST00000623706 NCLP19338 710 aaKnown RBP5.02□□□□□ -1.61
ATRX-212ENST00000623706 CLSPNQ9HAW4 1339 aa5.02□□□□□ -1.61
ATRX-212ENST00000623706 TRIM44Q96DX7 344 aaPredicted RBP4.99□□□□□ -1.61
ATRX-212ENST00000623706 ARID3AQ99856 593 aa4.97□□□□□ -1.61
ATRX-212ENST00000623706 APPP05067 770 aa4.97□□□□□ -1.61
ATRX-212ENST00000623706 A0A0U1RQG5 324 aaPredicted RBP4.97□□□□□ -1.61
ATRX-212ENST00000623706 MEX3CQ5U5Q3 659 aaKnown RBP4.96□□□□□ -1.62
ATRX-212ENST00000623706 HAP1P54257 671 aaPredicted RBP4.95□□□□□ -1.62
ATRX-212ENST00000623706 ANP32BQ92688 251 aaKnown RBP4.89□□□□□ -1.63
ATRX-212ENST00000623706 ARXQ96QS3 562 aa4.88□□□□□ -1.63
ATRX-212ENST00000623706 ZNF526Q8TF50 670 aaPredicted RBP4.88□□□□□ -1.63
ATRX-212ENST00000623706 BCL11AQ9H165 835 aa4.87□□□□□ -1.63
ATRX-212ENST00000623706 ZEB1P37275 1124 aaPredicted RBP4.86□□□□□ -1.63
ATRX-212ENST00000623706 ANP32EQ9BTT0 268 aa4.86□□□□□ -1.63
ATRX-212ENST00000623706 CDK11AQ9UQ88 783 aaPredicted RBP4.85□□□□□ -1.63
ATRX-212ENST00000623706 PCGF6Q9BYE7 350 aa4.85□□□□□ -1.63
ATRX-212ENST00000623706 NCBP3Q53F19 620 aaKnown RBP4.84□□□□□ -1.64
ATRX-212ENST00000623706 STK11IPQ8N1F8 1099 aa4.83□□□□□ -1.64
ATRX-212ENST00000623706 CNGB1Q14028 1251 aaPredicted RBP4.82□□□□□ -1.64
ATRX-212ENST00000623706 TNNT3P45378 269 aaPredicted RBP4.82□□□□□ -1.64
ATRX-212ENST00000623706 DCAF8L1A6NGE4 600 aa4.81□□□□□ -1.64
ATRX-212ENST00000623706 ANP32AP39687 249 aaKnown RBP4.81□□□□□ -1.64
ATRX-212ENST00000623706 ARID4BQ4LE39 1312 aaPredicted RBP4.81□□□□□ -1.64
ATRX-212ENST00000623706 LMOD2Q6P5Q4 547 aa4.8□□□□□ -1.64
ATRX-212ENST00000623706 C14orf37Q86TY3 774 aa4.79□□□□□ -1.64
ATRX-212ENST00000623706 BCANQ96GW7 911 aa4.79□□□□□ -1.64
ATRX-212ENST00000623706 NEFMP07197 916 aa4.78□□□□□ -1.64
ATRX-212ENST00000623706 RTN4Q9NQC3 1192 aaKnown RBP4.78□□□□□ -1.64
ATRX-212ENST00000623706 AEBP2Q6ZN18 517 aaPredicted RBP4.78□□□□□ -1.64
ATRX-212ENST00000623706 PTMSP20962 102 aa4.77□□□□□ -1.65
ATRX-212ENST00000623706 NPM2Q86SE8 214 aaKnown RBP4.76□□□□□ -1.65
ATRX-212ENST00000623706 APLP2Q06481 763 aa4.76□□□□□ -1.65
ATRX-212ENST00000623706 TAF7LQ5H9L4 462 aa4.76□□□□□ -1.65
ATRX-212ENST00000623706 PODXL2Q9NZ53 605 aa4.76□□□□□ -1.65
ATRX-212ENST00000623706 NAP1L5Q96NT1 182 aaPredicted RBP4.76□□□□□ -1.65
ATRX-212ENST00000623706 NBR1Q14596 966 aa4.76□□□□□ -1.65
ATRX-212ENST00000623706 LAS1LQ9Y4W2 734 aaKnown RBP4.75□□□□□ -1.65
ATRX-212ENST00000623706 TRIM41Q8WV44 630 aa4.74□□□□□ -1.65
ATRX-212ENST00000623706 TULP1O00294 542 aaPredicted RBP4.73□□□□□ -1.65
ATRX-212ENST00000623706 ZBTB47Q9UFB7 747 aaPredicted RBP4.73□□□□□ -1.65
ATRX-212ENST00000623706 PPP1R1BQ9UD71 204 aaPredicted RBP4.72□□□□□ -1.65
ATRX-212ENST00000623706 FBXO3Q9UK99 471 aa4.72□□□□□ -1.65
ATRX-212ENST00000623706 TRIM26Q12899 539 aaPredicted RBP4.72□□□□□ -1.65
ATRX-212ENST00000623706 DNTTIP2Q5QJE6 756 aaKnown RBP4.72□□□□□ -1.65
ATRX-212ENST00000623706 GOLGA6L22H0YM25 854 aa4.71□□□□□ -1.66
ATRX-212ENST00000623706 WDR43Q15061 677 aaKnown RBP eCLIP4.71□□□□□ -1.66
ATRX-212ENST00000623706 NEFHP12036 1026 aa4.7□□□□□ -1.66
ATRX-212ENST00000623706 PRM3Q9NNZ6 103 aa4.7□□□□□ -1.66
ATRX-212ENST00000623706 PATL2C9JE40 543 aaKnown RBP4.7□□□□□ -1.66
ATRX-212ENST00000623706 HSP90AA1P07900 732 aaKnown RBP4.7□□□□□ -1.66
ATRX-212ENST00000623706 SUPT5HO00267 1087 aaKnown RBP4.69□□□□□ -1.66
ATRX-212ENST00000623706 BCCIPQ9P287 314 aaKnown RBP eCLIP4.69□□□□□ -1.66
ATRX-212ENST00000623706 ANP32CO43423 234 aa4.69□□□□□ -1.66
ATRX-212ENST00000623706 GOLGA6L1Q8N7Z2 621 aa4.69□□□□□ -1.66
ATRX-212ENST00000623706 SLC4A1APQ9BWU0 796 aaKnown RBP4.68□□□□□ -1.66
ATRX-212ENST00000623706 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.68□□□□□ -1.66
ATRX-212ENST00000623706 TMX4Q9H1E5 349 aaPredicted RBP4.67□□□□□ -1.66
ATRX-212ENST00000623706 CCDC136Q96JN2 1154 aa4.67□□□□□ -1.66
ATRX-212ENST00000623706 CFAP44Q96MT7 982 aa4.67□□□□□ -1.66
ATRX-212ENST00000623706 USP35Q9P2H5 1018 aa4.66□□□□□ -1.66
ATRX-212ENST00000623706 KLHL34Q8N239 644 aa4.66□□□□□ -1.66
ATRX-212ENST00000623706 PRKCSHP14314 528 aaPredicted RBP4.66□□□□□ -1.66
ATRX-212ENST00000623706 GOLGA6L3A6NEY3 463 aa4.65□□□□□ -1.67
ATRX-212ENST00000623706 PTMAP06454 111 aaKnown RBP4.64□□□□□ -1.67
ATRX-212ENST00000623706 TPRNQ4KMQ1 711 aa4.64□□□□□ -1.67
ATRX-212ENST00000623706 NOC3LQ8WTT2 800 aaKnown RBP4.63□□□□□ -1.67
ATRX-212ENST00000623706 SETQ01105 290 aaPredicted RBP4.62□□□□□ -1.67
ATRX-212ENST00000623706 PLPPR3Q6T4P5 718 aa4.62□□□□□ -1.67
ATRX-212ENST00000623706 NEUROD1Q13562 356 aa4.62□□□□□ -1.67
ATRX-212ENST00000623706 ZBTB7CA1YPR0 619 aa4.61□□□□□ -1.67
ATRX-212ENST00000623706 GOLGA6L6A8MZA4 724 aa4.61□□□□□ -1.67
ATRX-212ENST00000623706 VSIG10Q8N0Z9 540 aa4.61□□□□□ -1.67
ATRX-212ENST00000623706 CHAF1AQ13111 956 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms