RNA–Protein interactions for RNA: ENST00000621977.1

MIR6888-201, Transcript of microRNA 6888, humanhuman

BASIC

Gene MIR6888, Length 67 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR6888-201ENST00000621977 POTEDQ86YR6 584 aa3.96□□□□□ -1.78
MIR6888-201ENST00000621977 AEBP2Q6ZN18 517 aaPredicted RBP3.79□□□□□ -1.8
MIR6888-201ENST00000621977 CHIC1Q5VXU3 224 aa3.64□□□□□ -1.83
MIR6888-201ENST00000621977 SENP3Q9H4L4 574 aaPredicted RBP3.39□□□□□ -1.87
MIR6888-201ENST00000621977 PHF23Q9BUL5 403 aaPredicted RBP3.27□□□□□ -1.89
MIR6888-201ENST00000621977 MSH5O43196 834 aa3.23□□□□□ -1.89
MIR6888-201ENST00000621977 FOXD1Q16676 465 aa3.18□□□□□ -1.9
MIR6888-201ENST00000621977 CACNB1Q02641 598 aaPredicted RBP3.11□□□□□ -1.91
MIR6888-201ENST00000621977 POTEHQ6S545 545 aa3.03□□□□□ -1.92
MIR6888-201ENST00000621977 PIAS4Q8N2W9 510 aaPredicted RBP2.9□□□□□ -1.95
MIR6888-201ENST00000621977 PLSCR2Q9NRY7 297 aa2.78□□□□□ -1.96
MIR6888-201ENST00000621977 RNF39Q9H2S5 420 aa2.66□□□□□ -1.98
MIR6888-201ENST00000621977 C1QBPQ07021 282 aaKnown RBP2.63□□□□□ -1.99
MIR6888-201ENST00000621977 DCAF8L1A6NGE4 600 aa2.61□□□□□ -1.99
MIR6888-201ENST00000621977 SP7Q8TDD2 431 aaPredicted RBP2.6□□□□□ -1.99
MIR6888-201ENST00000621977 DMRT2Q9Y5R5 561 aa2.58□□□□□ -2
MIR6888-201ENST00000621977 ADRA2BP18089 450 aa2.57□□□□□ -2
MIR6888-201ENST00000621977 PPP6R1Q9UPN7 881 aa2.57□□□□□ -2
MIR6888-201ENST00000621977 MAPK8IP2Q13387 824 aaPredicted RBP2.5□□□□□ -2.01
MIR6888-201ENST00000621977 LHX8Q68G74 356 aa2.45□□□□□ -2.02
MIR6888-201ENST00000621977 SCAF1Q9H7N4 1312 aaKnown RBP2.43□□□□□ -2.02
MIR6888-201ENST00000621977 CHRDL2Q6WN34 429 aa2.42□□□□□ -2.02
MIR6888-201ENST00000621977 HAX1O00165 279 aa2.39□□□□□ -2.03
MIR6888-201ENST00000621977 POTEMA6NI47 508 aa2.34□□□□□ -2.03
MIR6888-201ENST00000621977 PLPPR3Q6T4P5 718 aa2.34□□□□□ -2.03
MIR6888-201ENST00000621977 PCDH10Q9P2E7 1040 aa2.34□□□□□ -2.03
MIR6888-201ENST00000621977 DSG3P32926 999 aa2.33□□□□□ -2.04
MIR6888-201ENST00000621977 POTEGQ6S5H5 508 aa2.31□□□□□ -2.04
MIR6888-201ENST00000621977 CAPN15O75808 1086 aa2.3□□□□□ -2.04
MIR6888-201ENST00000621977 RBM42Q9BTD8 480 aaKnown RBP2.3□□□□□ -2.04
MIR6888-201ENST00000621977 DNAJC5BQ9UF47 199 aa2.3□□□□□ -2.04
MIR6888-201ENST00000621977 HOXD11P31277 338 aaPredicted RBP2.28□□□□□ -2.04
MIR6888-201ENST00000621977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.26□□□□□ -2.05
MIR6888-201ENST00000621977 PIP4P2Q8N4L2 257 aa2.23□□□□□ -2.05
MIR6888-201ENST00000621977 EVX2Q03828 476 aa2.22□□□□□ -2.05
MIR6888-201ENST00000621977 SPINK5Q9NQ38 1064 aaPredicted RBP2.2□□□□□ -2.06
MIR6888-201ENST00000621977 GABBR2O75899 941 aa2.19□□□□□ -2.06
MIR6888-201ENST00000621977 ABCB7O75027 752 aa2.17□□□□□ -2.06
MIR6888-201ENST00000621977 RNF216Q9NWF9 866 aaPredicted RBP2.16□□□□□ -2.06
MIR6888-201ENST00000621977 OTUD5Q96G74 571 aa2.14□□□□□ -2.07
MIR6888-201ENST00000621977 TRHP20396 242 aaPredicted RBP2.13□□□□□ -2.07
MIR6888-201ENST00000621977 FXR2P51116 673 aaKnown RBP eCLIP2.12□□□□□ -2.07
MIR6888-201ENST00000621977 CDAN1Q8IWY9 1227 aa2.12□□□□□ -2.07
MIR6888-201ENST00000621977 FAM163AQ96GL9 167 aaPredicted RBP2.12□□□□□ -2.07
MIR6888-201ENST00000621977 MMRN1Q13201 1228 aa2.11□□□□□ -2.07
MIR6888-201ENST00000621977 AKT1S1Q96B36 256 aa2.11□□□□□ -2.07
MIR6888-201ENST00000621977 ZNF219Q9P2Y4 722 aaPredicted RBP2.1□□□□□ -2.07
MIR6888-201ENST00000621977 POTEIP0CG38 1075 aa2.09□□□□□ -2.07
MIR6888-201ENST00000621977 DCBLD2Q96PD2 775 aa2.09□□□□□ -2.07
MIR6888-201ENST00000621977 C19orf67A6NJJ6 358 aa2.08□□□□□ -2.08
MIR6888-201ENST00000621977 REM2Q8IYK8 340 aaPredicted RBP2.08□□□□□ -2.08
MIR6888-201ENST00000621977 APLP2Q06481 763 aa2.07□□□□□ -2.08
MIR6888-201ENST00000621977 U3KPZ7 1027 aaPredicted RBP2.07□□□□□ -2.08
MIR6888-201ENST00000621977 CNKSR2Q8WXI2 1034 aa2.06□□□□□ -2.08
MIR6888-201ENST00000621977 PITPNM1O00562 1244 aa2.05□□□□□ -2.08
MIR6888-201ENST00000621977 SPNS2Q8IVW8 549 aa2.05□□□□□ -2.08
MIR6888-201ENST00000621977 CLCN6P51797 869 aa2.03□□□□□ -2.08
MIR6888-201ENST00000621977 PRKAR2AP13861 404 aaKnown RBP2.02□□□□□ -2.09
MIR6888-201ENST00000621977 LCE2DQ5TA82 110 aaPredicted RBP2.02□□□□□ -2.09
MIR6888-201ENST00000621977 POTEB2H3BUK9 544 aa2.01□□□□□ -2.09
MIR6888-201ENST00000621977 MAMSTRQ6ZN01 415 aa2.01□□□□□ -2.09
MIR6888-201ENST00000621977 PPP4R3CPQ6ZMV5 832 aa1.97□□□□□ -2.09
MIR6888-201ENST00000621977 SCUBE2Q9NQ36 999 aa1.97□□□□□ -2.09
MIR6888-201ENST00000621977 POLA2Q14181 598 aa1.94□□□□□ -2.1
MIR6888-201ENST00000621977 CD44P16070 742 aaKnown RBP1.93□□□□□ -2.1
MIR6888-201ENST00000621977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP1.92□□□□□ -2.1
MIR6888-201ENST00000621977 HNRNPUL2Q1KMD3 747 aaKnown RBP1.92□□□□□ -2.1
MIR6888-201ENST00000621977 CLEC11AQ9Y240 323 aa1.92□□□□□ -2.1
MIR6888-201ENST00000621977 CHADLQ6NUI6 762 aa1.89□□□□□ -2.11
MIR6888-201ENST00000621977 METRNQ9UJH8 293 aa1.89□□□□□ -2.11
MIR6888-201ENST00000621977 ST18O60284 1047 aa1.88□□□□□ -2.11
MIR6888-201ENST00000621977 POTEJP0CG39 1038 aa1.88□□□□□ -2.11
MIR6888-201ENST00000621977 SLC39A7Q92504 469 aa1.88□□□□□ -2.11
MIR6888-201ENST00000621977 ZBTB12Q9Y330 459 aaPredicted RBP1.88□□□□□ -2.11
MIR6888-201ENST00000621977 C7P10643 843 aa1.87□□□□□ -2.11
MIR6888-201ENST00000621977 SAMD1Q6SPF0 538 aaPredicted RBP1.87□□□□□ -2.11
MIR6888-201ENST00000621977 OSCARQ8IYS5 282 aa1.87□□□□□ -2.11
MIR6888-201ENST00000621977 SPDYE1Q8NFV5 336 aaPredicted RBP1.87□□□□□ -2.11
MIR6888-201ENST00000621977 GALR2O43603 387 aaPredicted RBP1.86□□□□□ -2.11
MIR6888-201ENST00000621977 PELP1Q8IZL8 1130 aaKnown RBP1.85□□□□□ -2.11
MIR6888-201ENST00000621977 RNF166Q96A37 237 aaPredicted RBP1.85□□□□□ -2.11
MIR6888-201ENST00000621977 LOC100996750A0A140TA64 210 aa1.84□□□□□ -2.11
MIR6888-201ENST00000621977 ZNF579Q8NAF0 562 aaKnown RBP1.84□□□□□ -2.11
MIR6888-201ENST00000621977 TMEM121BQ9BXQ6 578 aaPredicted RBP1.84□□□□□ -2.11
MIR6888-201ENST00000621977 KRTAP4-6Q9BYQ5 205 aa1.84□□□□□ -2.11
MIR6888-201ENST00000621977 ZRANB1Q9UGI0 708 aa1.84□□□□□ -2.11
MIR6888-201ENST00000621977 MARVELD3Q96A59 401 aa1.82□□□□□ -2.12
MIR6888-201ENST00000621977 IRX2Q9BZI1 471 aaPredicted RBP1.81□□□□□ -2.12
MIR6888-201ENST00000621977 ATF5Q9Y2D1 282 aaPredicted RBP1.81□□□□□ -2.12
MIR6888-201ENST00000621977 PRR29P0C7W0 189 aa1.8□□□□□ -2.12
MIR6888-201ENST00000621977 NCBP3Q53F19 620 aaKnown RBP1.8□□□□□ -2.12
MIR6888-201ENST00000621977 SLAIN1Q8ND83 568 aa1.8□□□□□ -2.12
MIR6888-201ENST00000621977 FARP1Q9Y4F1 1045 aaPredicted RBP1.8□□□□□ -2.12
MIR6888-201ENST00000621977 SNPHO15079 494 aa1.79□□□□□ -2.12
MIR6888-201ENST00000621977 EMP3P54852 163 aa1.79□□□□□ -2.12
MIR6888-201ENST00000621977 KRTAP3-3Q9BYR6 98 aa1.79□□□□□ -2.12
MIR6888-201ENST00000621977 KRTAP3-2Q9BYR7 98 aa1.79□□□□□ -2.12
MIR6888-201ENST00000621977 MYT1LQ9UL68 1186 aa1.79□□□□□ -2.12
MIR6888-201ENST00000621977 ASTLQ6HA08 431 aaPredicted RBP1.78□□□□□ -2.12
MIR6888-201ENST00000621977 PLA2G2EQ9NZK7 142 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms