RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 NISCHQ9Y2I1 1504 aa42.61■■■■■ 4.41
TARDBP-225ENST00000621715 ABCC9O60706 1549 aa38.55■■■■□ 3.76
TARDBP-225ENST00000621715 CCDC180Q9P1Z9 1646 aa38.27■■■■□ 3.72
TARDBP-225ENST00000621715 RB1CC1Q8TDY2 1594 aa36.5■■■■□ 3.43
TARDBP-225ENST00000621715 DNAJC5BQ9UF47 199 aa36.46■■■■□ 3.43
TARDBP-225ENST00000621715 NACADO15069 1562 aa36.2■■■■□ 3.39
TARDBP-225ENST00000621715 DCAF8L2P0C7V8 631 aa35.98■■■■□ 3.35
TARDBP-225ENST00000621715 PABPN1Q86U42 306 aaKnown RBP eCLIP35.87■■■■□ 3.33
TARDBP-225ENST00000621715 UNC13AQ9UPW8 1703 aa35.86■■■■□ 3.33
TARDBP-225ENST00000621715 MYO15BQ96JP2 1530 aa35.62■■■■□ 3.29
TARDBP-225ENST00000621715 BICRAQ9NZM4 1560 aa35.61■■■■□ 3.29
TARDBP-225ENST00000621715 ZCCHC6Q5VYS8 1495 aaKnown RBP35.28■■■■□ 3.24
TARDBP-225ENST00000621715 DCAF1Q9Y4B6 1507 aa35.11■■■■□ 3.21
TARDBP-225ENST00000621715 SCRIBQ14160 1630 aa34.95■■■■□ 3.18
TARDBP-225ENST00000621715 SHROOM4Q9ULL8 1493 aa34.88■■■■□ 3.17
TARDBP-225ENST00000621715 CC2D2AQ9P2K1 1620 aa34.81■■■■□ 3.16
TARDBP-225ENST00000621715 CECR2Q9BXF3 1484 aa34.7■■■■□ 3.15
TARDBP-225ENST00000621715 EIF4G1Q04637 1599 aaKnown RBP34.67■■■■□ 3.14
TARDBP-225ENST00000621715 NCAPD3P42695 1498 aa33.46■■■□□ 2.95
TARDBP-225ENST00000621715 DNAJC5Q9H3Z4 198 aa33.46■■■□□ 2.95
TARDBP-225ENST00000621715 ATAD2BQ9ULI0 1458 aa33.37■■■□□ 2.93
TARDBP-225ENST00000621715 SMARCA4P51532 1647 aa33.29■■■□□ 2.92
TARDBP-225ENST00000621715 CUX2O14529 1486 aa33.2■■■□□ 2.91
TARDBP-225ENST00000621715 ERCC6Q03468 1493 aa33.19■■■□□ 2.9
TARDBP-225ENST00000621715 HMGXB3Q12766 1538 aa33.18■■■□□ 2.9
TARDBP-225ENST00000621715 SMARCA2P51531 1590 aa33.18■■■□□ 2.9
TARDBP-225ENST00000621715 NESP48681 1621 aa33.12■■■□□ 2.89
TARDBP-225ENST00000621715 BAZ1AQ9NRL2 1556 aaPredicted RBP33.02■■■□□ 2.88
TARDBP-225ENST00000621715 BAZ1BQ9UIG0 1483 aaKnown RBP32.99■■■□□ 2.87
TARDBP-225ENST00000621715 PEG3Q9GZU2 1588 aa32.95■■■□□ 2.86
TARDBP-225ENST00000621715 MROH2BQ7Z745 1585 aa32.89■■■□□ 2.86
TARDBP-225ENST00000621715 THOC2Q8NI27 1593 aaKnown RBP32.79■■■□□ 2.84
TARDBP-225ENST00000621715 LAMC3Q9Y6N6 1575 aa32.71■■■□□ 2.83
TARDBP-225ENST00000621715 KIF21AQ7Z4S6 1674 aa32.66■■■□□ 2.82
TARDBP-225ENST00000621715 WIZO95785 1651 aa32.5■■■□□ 2.79
TARDBP-225ENST00000621715 PDS5BQ9NTI5 1447 aa32.48■■■□□ 2.79
TARDBP-225ENST00000621715 CADPSQ9ULU8 1353 aa32.42■■■□□ 2.78
TARDBP-225ENST00000621715 MRC2Q9UBG0 1479 aa32.29■■■□□ 2.76
TARDBP-225ENST00000621715 WDR62O43379 1518 aa32.25■■■□□ 2.75
TARDBP-225ENST00000621715 CEP164Q9UPV0 1460 aa32.1■■■□□ 2.73
TARDBP-225ENST00000621715 RSF1Q96T23 1441 aaPredicted RBP32.09■■■□□ 2.73
TARDBP-225ENST00000621715 FANCD2Q9BXW9 1451 aa32.08■■■□□ 2.73
TARDBP-225ENST00000621715 CFTRP13569 1480 aa32.03■■■□□ 2.72
TARDBP-225ENST00000621715 TOP2AP11388 1531 aaKnown RBP31.99■■■□□ 2.71
TARDBP-225ENST00000621715 TRIM41Q8WV44 630 aa31.92■■■□□ 2.7
TARDBP-225ENST00000621715 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
TARDBP-225ENST00000621715 PRDM2Q13029 1718 aa31.72■■■□□ 2.67
TARDBP-225ENST00000621715 CCDC88BA6NC98 1476 aa31.66■■■□□ 2.66
TARDBP-225ENST00000621715 OSCARQ8IYS5 282 aa31.62■■■□□ 2.65
TARDBP-225ENST00000621715 ZNF608Q9ULD9 1512 aaPredicted RBP31.56■■■□□ 2.64
TARDBP-225ENST00000621715 TOPBP1Q92547 1522 aa31.48■■■□□ 2.63
TARDBP-225ENST00000621715 IFT140Q96RY7 1462 aa31.45■■■□□ 2.62
TARDBP-225ENST00000621715 RIMBP3CA6NJZ7 1639 aa31.38■■■□□ 2.61
TARDBP-225ENST00000621715 RIMBP3BA6NNM3 1639 aa31.38■■■□□ 2.61
TARDBP-225ENST00000621715 RIMBP3Q9UFD9 1639 aa31.38■■■□□ 2.61
TARDBP-225ENST00000621715 EIF4G3O43432 1585 aaKnown RBP31.33■■■□□ 2.61
TARDBP-225ENST00000621715 DNMBPQ6XZF7 1577 aa31.31■■■□□ 2.6
TARDBP-225ENST00000621715 TARBP1Q13395 1621 aaKnown RBP31.25■■■□□ 2.59
TARDBP-225ENST00000621715 ABCC8Q09428 1581 aa31.24■■■□□ 2.59
TARDBP-225ENST00000621715 ARHGEF11O15085 1522 aa31.23■■■□□ 2.59
TARDBP-225ENST00000621715 AQRO60306 1485 aaKnown RBP eCLIP31.21■■■□□ 2.592e-7■■□□□ 14.3
TARDBP-225ENST00000621715 CHD1O14646 1710 aa31.16■■■□□ 2.58
TARDBP-225ENST00000621715 POLA1P09884 1462 aaPredicted RBP31.14■■■□□ 2.58
TARDBP-225ENST00000621715 RAD54L2Q9Y4B4 1467 aa31.08■■■□□ 2.57
TARDBP-225ENST00000621715 CYB5RLQ6IPT4 315 aa30.97■■■□□ 2.55
TARDBP-225ENST00000621715 TDRD9Q8NDG6 1382 aaKnown RBP30.96■■■□□ 2.55
TARDBP-225ENST00000621715 SOGA1O94964 1423 aa30.95■■■□□ 2.54
TARDBP-225ENST00000621715 FBLN2P98095 1184 aa30.94■■■□□ 2.54
TARDBP-225ENST00000621715 ARAP1Q96P48 1450 aa30.94■■■□□ 2.54
TARDBP-225ENST00000621715 FGD5Q6ZNL6 1462 aa30.92■■■□□ 2.54
TARDBP-225ENST00000621715 CUX1P39880 1505 aa30.91■■■□□ 2.54
TARDBP-225ENST00000621715 SNAPC4Q5SXM2 1469 aa30.86■■■□□ 2.53
TARDBP-225ENST00000621715 CLASP1Q7Z460 1538 aa30.78■■■□□ 2.52
TARDBP-225ENST00000621715 WDR97A6NE52 1622 aa30.76■■■□□ 2.52
TARDBP-225ENST00000621715 MAGI1Q96QZ7 1491 aaPredicted RBP30.7■■■□□ 2.5
TARDBP-225ENST00000621715 GRIN2BQ13224 1484 aa30.68■■■□□ 2.5
TARDBP-225ENST00000621715 CHMP7Q8WUX9 453 aaPredicted RBP30.65■■■□□ 2.5
TARDBP-225ENST00000621715 SYNJ1O43426 1573 aa30.64■■■□□ 2.5
TARDBP-225ENST00000621715 PBRM1Q86U86 1689 aa30.63■■■□□ 2.49
TARDBP-225ENST00000621715 TRHP20396 242 aaPredicted RBP30.62■■■□□ 2.49
TARDBP-225ENST00000621715 SYNJ2O15056 1496 aa30.62■■■□□ 2.49
TARDBP-225ENST00000621715 GAPVD1Q14C86 1478 aa30.57■■■□□ 2.48
TARDBP-225ENST00000621715 ABCA5Q8WWZ7 1642 aa30.55■■■□□ 2.48
TARDBP-225ENST00000621715 ABCA10Q8WWZ4 1543 aa30.52■■■□□ 2.48
TARDBP-225ENST00000621715 SUPT5HO00267 1087 aaKnown RBP30.48■■■□□ 2.47
TARDBP-225ENST00000621715 ERCC6L2Q5T890 1561 aa30.38■■■□□ 2.45
TARDBP-225ENST00000621715 GRIN2AQ12879 1464 aa30.33■■■□□ 2.45
TARDBP-225ENST00000621715 ADAMTS12P58397 1594 aa30.32■■■□□ 2.45
TARDBP-225ENST00000621715 BIVM-ERCC5R4GMW8 1640 aa30.32■■■□□ 2.44
TARDBP-225ENST00000621715 WRNQ14191 1432 aaPredicted RBP eCLIP30.3■■■□□ 2.446e-7■□□□□ 11.3
TARDBP-225ENST00000621715 CEP170Q5SW79 1584 aa30.3■■■□□ 2.44
TARDBP-225ENST00000621715 TOP2BQ02880 1626 aa30.29■■■□□ 2.44
TARDBP-225ENST00000621715 NUP160Q12769 1436 aa30.25■■■□□ 2.43
TARDBP-225ENST00000621715 SHROOM2Q13796 1616 aa30.17■■■□□ 2.42
TARDBP-225ENST00000621715 FHAD1B1AJZ9 1412 aa30.15■■■□□ 2.42
TARDBP-225ENST00000621715 ERICH3Q5RHP9 1530 aa30.11■■■□□ 2.41
TARDBP-225ENST00000621715 PRG4Q92954 1404 aaPredicted RBP29.95■■■□□ 2.38
TARDBP-225ENST00000621715 RUSC2Q8N2Y8 1516 aa29.91■■■□□ 2.38
TARDBP-225ENST00000621715 KIF13AQ9H1H9 1805 aa29.91■■■□□ 2.38
TARDBP-225ENST00000621715 JPH4Q96JJ6 628 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms