RNA–Protein interactions for RNA: ENST00000620438.1

HIST3H2BB-201, Transcript of histone cluster 3 H2B family member b, humanhuman

APPRIS P1 BASIC

Gene HIST3H2BB, Length 2,364 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BB-201ENST00000620438 NISCHQ9Y2I1 1504 aa30.23■■■□□ 2.43
HIST3H2BB-201ENST00000620438 CCDC180Q9P1Z9 1646 aa26.24■■□□□ 1.79
HIST3H2BB-201ENST00000620438 ZCCHC6Q5VYS8 1495 aaKnown RBP25.41■■□□□ 1.66
HIST3H2BB-201ENST00000620438 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
HIST3H2BB-201ENST00000620438 DCAF1Q9Y4B6 1507 aa24.95■■□□□ 1.58
HIST3H2BB-201ENST00000620438 ABCC9O60706 1549 aa24.83■■□□□ 1.56
HIST3H2BB-201ENST00000620438 SHROOM4Q9ULL8 1493 aa24.8■■□□□ 1.56
HIST3H2BB-201ENST00000620438 MYO15BQ96JP2 1530 aa24.6■■□□□ 1.53
HIST3H2BB-201ENST00000620438 NACADO15069 1562 aa24.44■■□□□ 1.5
HIST3H2BB-201ENST00000620438 SUPT5HO00267 1087 aaKnown RBP24.27■■□□□ 1.48
HIST3H2BB-201ENST00000620438 SCRIBQ14160 1630 aa24.23■■□□□ 1.47
HIST3H2BB-201ENST00000620438 RB1CC1Q8TDY2 1594 aa24.2■■□□□ 1.46
HIST3H2BB-201ENST00000620438 HRCP23327 699 aa23.98■■□□□ 1.43
HIST3H2BB-201ENST00000620438 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
HIST3H2BB-201ENST00000620438 UNC13AQ9UPW8 1703 aa23.76■■□□□ 1.39
HIST3H2BB-201ENST00000620438 PCGF6Q9BYE7 350 aa23.58■■□□□ 1.37
HIST3H2BB-201ENST00000620438 BICRAQ9NZM4 1560 aa23.55■■□□□ 1.36
HIST3H2BB-201ENST00000620438 CECR2Q9BXF3 1484 aa23.54■■□□□ 1.36
HIST3H2BB-201ENST00000620438 RSF1Q96T23 1441 aaPredicted RBP23.52■■□□□ 1.36
HIST3H2BB-201ENST00000620438 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.35
HIST3H2BB-201ENST00000620438 MROH2BQ7Z745 1585 aa23.39■■□□□ 1.34
HIST3H2BB-201ENST00000620438 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
HIST3H2BB-201ENST00000620438 PPARGC1BQ86YN6 1023 aaKnown RBP23.23■■□□□ 1.31
HIST3H2BB-201ENST00000620438 SMARCA4P51532 1647 aa23.2■■□□□ 1.31
HIST3H2BB-201ENST00000620438 WIZO95785 1651 aa23.2■■□□□ 1.3
HIST3H2BB-201ENST00000620438 TRIM26Q12899 539 aaPredicted RBP23.14■■□□□ 1.29
HIST3H2BB-201ENST00000620438 LOC105371045A0A1W2PR82 267 aa23.12■■□□□ 1.29
HIST3H2BB-201ENST00000620438 ZEB1P37275 1124 aaPredicted RBP22.94■■□□□ 1.26
HIST3H2BB-201ENST00000620438 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
HIST3H2BB-201ENST00000620438 PEG3Q9GZU2 1588 aa22.9■■□□□ 1.26
HIST3H2BB-201ENST00000620438 ATAD2BQ9ULI0 1458 aa22.82■■□□□ 1.24
HIST3H2BB-201ENST00000620438 EIF4G1Q04637 1599 aaKnown RBP22.79■■□□□ 1.24
HIST3H2BB-201ENST00000620438 SMARCA2P51531 1590 aa22.75■■□□□ 1.23
HIST3H2BB-201ENST00000620438 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
HIST3H2BB-201ENST00000620438 BAZ1BQ9UIG0 1483 aaKnown RBP22.67■■□□□ 1.22
HIST3H2BB-201ENST00000620438 PELP1Q8IZL8 1130 aaKnown RBP22.67■■□□□ 1.22
HIST3H2BB-201ENST00000620438 TRIM41Q8WV44 630 aa22.67■■□□□ 1.22
HIST3H2BB-201ENST00000620438 NCAPD3P42695 1498 aa22.59■■□□□ 1.21
HIST3H2BB-201ENST00000620438 HMGXB3Q12766 1538 aa22.54■■□□□ 1.2
HIST3H2BB-201ENST00000620438 CC2D2AQ9P2K1 1620 aa22.44■■□□□ 1.18
HIST3H2BB-201ENST00000620438 FAM9AQ8IZU1 332 aaPredicted RBP22.38■■□□□ 1.17
HIST3H2BB-201ENST00000620438 SCAF1Q9H7N4 1312 aaKnown RBP22.3■■□□□ 1.16
HIST3H2BB-201ENST00000620438 ABCC8Q09428 1581 aa22.3■■□□□ 1.16
HIST3H2BB-201ENST00000620438 CFTRP13569 1480 aa22.12■■□□□ 1.13
HIST3H2BB-201ENST00000620438 WRNQ14191 1432 aaPredicted RBP eCLIP22.1■■□□□ 1.13
HIST3H2BB-201ENST00000620438 EHMT2Q96KQ7 1210 aa22.09■■□□□ 1.13
HIST3H2BB-201ENST00000620438 CCER1Q8TC90 406 aaPredicted RBP22.05■■□□□ 1.12
HIST3H2BB-201ENST00000620438 SYNJ1O43426 1573 aa22.03■■□□□ 1.12
HIST3H2BB-201ENST00000620438 ACIN1Q9UKV3 1341 aaKnown RBP22.03■■□□□ 1.12
HIST3H2BB-201ENST00000620438 CADPSQ9ULU8 1353 aa22.02■■□□□ 1.12
HIST3H2BB-201ENST00000620438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.99■■□□□ 1.11
HIST3H2BB-201ENST00000620438 DNAJC5BQ9UF47 199 aa21.97■■□□□ 1.11
HIST3H2BB-201ENST00000620438 PRDM2Q13029 1718 aa21.95■■□□□ 1.1
HIST3H2BB-201ENST00000620438 SOGA1O94964 1423 aa21.91■■□□□ 1.1
HIST3H2BB-201ENST00000620438 CENPBP07199 599 aaPredicted RBP21.91■■□□□ 1.1
HIST3H2BB-201ENST00000620438 TOP2BQ02880 1626 aa21.9■■□□□ 1.1
HIST3H2BB-201ENST00000620438 DIEXFQ68CQ4 756 aaKnown RBP21.88■■□□□ 1.09
HIST3H2BB-201ENST00000620438 NEUROD1Q13562 356 aa21.87■■□□□ 1.09
HIST3H2BB-201ENST00000620438 BIVM-ERCC5R4GMW8 1640 aa21.87■■□□□ 1.09
HIST3H2BB-201ENST00000620438 CUX1P39880 1505 aa21.86■■□□□ 1.09
HIST3H2BB-201ENST00000620438 NESP48681 1621 aa21.85■■□□□ 1.09
HIST3H2BB-201ENST00000620438 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
HIST3H2BB-201ENST00000620438 EEA1Q15075 1411 aa21.79■■□□□ 1.08
HIST3H2BB-201ENST00000620438 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
HIST3H2BB-201ENST00000620438 LAMC3Q9Y6N6 1575 aa21.76■■□□□ 1.07
HIST3H2BB-201ENST00000620438 MYT1Q01538 1121 aa21.74■■□□□ 1.07
HIST3H2BB-201ENST00000620438 CEP162Q5TB80 1403 aa21.74■■□□□ 1.07
HIST3H2BB-201ENST00000620438 TNIKQ9UKE5 1360 aa21.73■■□□□ 1.07
HIST3H2BB-201ENST00000620438 GTF3C3Q9Y5Q9 886 aa21.73■■□□□ 1.07
HIST3H2BB-201ENST00000620438 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
HIST3H2BB-201ENST00000620438 ZNF316A6NFI3 1004 aaPredicted RBP21.63■■□□□ 1.05
HIST3H2BB-201ENST00000620438 CEP164Q9UPV0 1460 aa21.61■■□□□ 1.05
HIST3H2BB-201ENST00000620438 PDS5BQ9NTI5 1447 aa21.61■■□□□ 1.05
HIST3H2BB-201ENST00000620438 FGD5Q6ZNL6 1462 aa21.59■■□□□ 1.05
HIST3H2BB-201ENST00000620438 DNMBPQ6XZF7 1577 aa21.58■■□□□ 1.05
HIST3H2BB-201ENST00000620438 TOPBP1Q92547 1522 aa21.57■■□□□ 1.04
HIST3H2BB-201ENST00000620438 KIF21AQ7Z4S6 1674 aa21.54■■□□□ 1.04
HIST3H2BB-201ENST00000620438 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
HIST3H2BB-201ENST00000620438 KIF21BO75037 1637 aa21.53■■□□□ 1.04
HIST3H2BB-201ENST00000620438 GOLGA3Q08378 1498 aa21.53■■□□□ 1.04
HIST3H2BB-201ENST00000620438 TTBK1Q5TCY1 1321 aaPredicted RBP21.52■■□□□ 1.04
HIST3H2BB-201ENST00000620438 KIF27Q86VH2 1401 aa21.52■■□□□ 1.04
HIST3H2BB-201ENST00000620438 UBTFP17480 764 aaKnown RBP21.51■■□□□ 1.03
HIST3H2BB-201ENST00000620438 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
HIST3H2BB-201ENST00000620438 CUX2O14529 1486 aa21.47■■□□□ 1.03
HIST3H2BB-201ENST00000620438 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.02
HIST3H2BB-201ENST00000620438 RAD54L2Q9Y4B4 1467 aa21.44■■□□□ 1.02
HIST3H2BB-201ENST00000620438 PRXQ9BXM0 1461 aa21.43■■□□□ 1.02
HIST3H2BB-201ENST00000620438 ABCA10Q8WWZ4 1543 aa21.38■■□□□ 1.01
HIST3H2BB-201ENST00000620438 IGF1RP08069 1367 aa21.37■■□□□ 1.01
HIST3H2BB-201ENST00000620438 ERICH3Q5RHP9 1530 aa21.36■■□□□ 1.01
HIST3H2BB-201ENST00000620438 MRC2Q9UBG0 1479 aa21.34■■□□□ 1.01
HIST3H2BB-201ENST00000620438 WDR97A6NE52 1622 aa21.3■■□□□ 1
HIST3H2BB-201ENST00000620438 MIER1Q8N108 512 aa21.29■■□□□ 1
HIST3H2BB-201ENST00000620438 YTHDC1Q96MU7 727 aaKnown RBP21.28■■□□□ 1
HIST3H2BB-201ENST00000620438 CLIP1P30622 1438 aa21.25■□□□□ 0.99
HIST3H2BB-201ENST00000620438 HNRNPUL2Q1KMD3 747 aaKnown RBP21.25■□□□□ 0.99
HIST3H2BB-201ENST00000620438 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
HIST3H2BB-201ENST00000620438 VPS8Q8N3P4 1428 aa21.24■□□□□ 0.99
HIST3H2BB-201ENST00000620438 TARBP1Q13395 1621 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms