RNA–Protein interactions for RNA: ENST00000619874.4

SMIM11B-202, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-202ENST00000619874 AEBP2Q6ZN18 517 aaPredicted RBP38.67■■■■□ 3.78
SMIM11B-202ENST00000619874 CHIC1Q5VXU3 224 aa36.65■■■■□ 3.46
SMIM11B-202ENST00000619874 SENP3Q9H4L4 574 aaPredicted RBP32.78■■■□□ 2.84
SMIM11B-202ENST00000619874 PHF23Q9BUL5 403 aaPredicted RBP32.44■■■□□ 2.78
SMIM11B-202ENST00000619874 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.58
SMIM11B-202ENST00000619874 FOXD1Q16676 465 aa30.68■■■□□ 2.5
SMIM11B-202ENST00000619874 PLPPR3Q6T4P5 718 aa29.19■■■□□ 2.26
SMIM11B-202ENST00000619874 PPP6R1Q9UPN7 881 aa28.78■■■□□ 2.2
SMIM11B-202ENST00000619874 ADRA2BP18089 450 aa28.61■■■□□ 2.17
SMIM11B-202ENST00000619874 PIAS4Q8N2W9 510 aaPredicted RBP28.55■■■□□ 2.16
SMIM11B-202ENST00000619874 MSH5O43196 834 aa28.54■■■□□ 2.16
SMIM11B-202ENST00000619874 POTEDQ86YR6 584 aa27.94■■■□□ 2.06
SMIM11B-202ENST00000619874 CCDC180Q9P1Z9 1646 aa27.31■■□□□ 1.96
SMIM11B-202ENST00000619874 MAPK8IP2Q13387 824 aaPredicted RBP26.3■■□□□ 1.8
SMIM11B-202ENST00000619874 ZCCHC6Q5VYS8 1495 aaKnown RBP26.2■■□□□ 1.78
SMIM11B-202ENST00000619874 DMRT2Q9Y5R5 561 aa26.07■■□□□ 1.76
SMIM11B-202ENST00000619874 SCAF1Q9H7N4 1312 aaKnown RBP25.97■■□□□ 1.75
SMIM11B-202ENST00000619874 DCAF1Q9Y4B6 1507 aa25.88■■□□□ 1.73
SMIM11B-202ENST00000619874 PPP4R3CPQ6ZMV5 832 aa25.64■■□□□ 1.7
SMIM11B-202ENST00000619874 MYO15BQ96JP2 1530 aa25.63■■□□□ 1.69
SMIM11B-202ENST00000619874 ABCC9O60706 1549 aa25.62■■□□□ 1.69
SMIM11B-202ENST00000619874 DCAF8L2P0C7V8 631 aa25.52■■□□□ 1.68
SMIM11B-202ENST00000619874 NACADO15069 1562 aa25.41■■□□□ 1.66
SMIM11B-202ENST00000619874 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
SMIM11B-202ENST00000619874 SHROOM4Q9ULL8 1493 aa25.16■■□□□ 1.62
SMIM11B-202ENST00000619874 HOXD11P31277 338 aaPredicted RBP25.15■■□□□ 1.62
SMIM11B-202ENST00000619874 CNKSR2Q8WXI2 1034 aa25.12■■□□□ 1.61
SMIM11B-202ENST00000619874 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
SMIM11B-202ENST00000619874 RNF216Q9NWF9 866 aaPredicted RBP24.91■■□□□ 1.58
SMIM11B-202ENST00000619874 DCAF8L1A6NGE4 600 aa24.82■■□□□ 1.56
SMIM11B-202ENST00000619874 UNC13AQ9UPW8 1703 aa24.55■■□□□ 1.52
SMIM11B-202ENST00000619874 NCBP3Q53F19 620 aaKnown RBP24.53■■□□□ 1.52
SMIM11B-202ENST00000619874 RNF39Q9H2S5 420 aa24.48■■□□□ 1.51
SMIM11B-202ENST00000619874 CACNB1Q02641 598 aaPredicted RBP24.46■■□□□ 1.51
SMIM11B-202ENST00000619874 NPM3O75607 178 aaKnown RBP24.35■■□□□ 1.49
SMIM11B-202ENST00000619874 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
SMIM11B-202ENST00000619874 DNAJC5BQ9UF47 199 aa24.26■■□□□ 1.47
SMIM11B-202ENST00000619874 SUPT5HO00267 1087 aaKnown RBP24.23■■□□□ 1.47
SMIM11B-202ENST00000619874 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
SMIM11B-202ENST00000619874 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
SMIM11B-202ENST00000619874 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
SMIM11B-202ENST00000619874 C1QBPQ07021 282 aaKnown RBP24.04■■□□□ 1.44
SMIM11B-202ENST00000619874 PABPN1Q86U42 306 aaKnown RBP eCLIP24.04■■□□□ 1.44
SMIM11B-202ENST00000619874 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
SMIM11B-202ENST00000619874 SMARCA4P51532 1647 aa23.97■■□□□ 1.43
SMIM11B-202ENST00000619874 KCNA4P22459 653 aa23.92■■□□□ 1.42
SMIM11B-202ENST00000619874 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.8■■□□□ 1.4
SMIM11B-202ENST00000619874 WIZO95785 1651 aa23.77■■□□□ 1.4
SMIM11B-202ENST00000619874 PEG3Q9GZU2 1588 aa23.74■■□□□ 1.39
SMIM11B-202ENST00000619874 TOP2AP11388 1531 aaKnown RBP23.67■■□□□ 1.38
SMIM11B-202ENST00000619874 SMARCA2P51531 1590 aa23.65■■□□□ 1.38
SMIM11B-202ENST00000619874 EIF4G1Q04637 1599 aaKnown RBP23.61■■□□□ 1.37
SMIM11B-202ENST00000619874 ATAD2BQ9ULI0 1458 aa23.55■■□□□ 1.36
SMIM11B-202ENST00000619874 U3KPZ7 1027 aaPredicted RBP23.46■■□□□ 1.35
SMIM11B-202ENST00000619874 BAZ1BQ9UIG0 1483 aaKnown RBP23.45■■□□□ 1.34
SMIM11B-202ENST00000619874 HMGXB3Q12766 1538 aa23.43■■□□□ 1.34
SMIM11B-202ENST00000619874 NCAPD3P42695 1498 aa23.39■■□□□ 1.34
SMIM11B-202ENST00000619874 SLC4A2P04920 1241 aa23.32■■□□□ 1.32
SMIM11B-202ENST00000619874 CCDC88BA6NC98 1476 aa23.31■■□□□ 1.32
SMIM11B-202ENST00000619874 CC2D2AQ9P2K1 1620 aa23.24■■□□□ 1.31
SMIM11B-202ENST00000619874 SPINK5Q9NQ38 1064 aaPredicted RBP23.12■■□□□ 1.29
SMIM11B-202ENST00000619874 DSG3P32926 999 aa22.93■■□□□ 1.26
SMIM11B-202ENST00000619874 CAPN15O75808 1086 aa22.92■■□□□ 1.26
SMIM11B-202ENST00000619874 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
SMIM11B-202ENST00000619874 CFTRP13569 1480 aa22.85■■□□□ 1.25
SMIM11B-202ENST00000619874 PRDM2Q13029 1718 aa22.83■■□□□ 1.25
SMIM11B-202ENST00000619874 ABCC8Q09428 1581 aa22.76■■□□□ 1.23
SMIM11B-202ENST00000619874 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
SMIM11B-202ENST00000619874 DNAJC5Q9H3Z4 198 aa22.74■■□□□ 1.23
SMIM11B-202ENST00000619874 WRNQ14191 1432 aaPredicted RBP eCLIP22.74■■□□□ 1.23
SMIM11B-202ENST00000619874 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
SMIM11B-202ENST00000619874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.6■■□□□ 1.21
SMIM11B-202ENST00000619874 HNRNPUL2Q1KMD3 747 aaKnown RBP22.6■■□□□ 1.21
SMIM11B-202ENST00000619874 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
SMIM11B-202ENST00000619874 TOP2BQ02880 1626 aa22.58■■□□□ 1.21
SMIM11B-202ENST00000619874 BIVM-ERCC5R4GMW8 1640 aa22.58■■□□□ 1.21
SMIM11B-202ENST00000619874 TRHP20396 242 aaPredicted RBP22.58■■□□□ 1.21
SMIM11B-202ENST00000619874 APLP2Q06481 763 aa22.55■■□□□ 1.2
SMIM11B-202ENST00000619874 EEA1Q15075 1411 aa22.53■■□□□ 1.2
SMIM11B-202ENST00000619874 SAMD1Q6SPF0 538 aaPredicted RBP22.52■■□□□ 1.2
SMIM11B-202ENST00000619874 ZNF219Q9P2Y4 722 aaPredicted RBP22.52■■□□□ 1.2
SMIM11B-202ENST00000619874 FANCD2Q9BXW9 1451 aa22.51■■□□□ 1.19
SMIM11B-202ENST00000619874 SLC4A1APQ9BWU0 796 aaKnown RBP22.48■■□□□ 1.19
SMIM11B-202ENST00000619874 ABCB7O75027 752 aa22.46■■□□□ 1.19
SMIM11B-202ENST00000619874 PDS5BQ9NTI5 1447 aa22.46■■□□□ 1.19
SMIM11B-202ENST00000619874 CUX1P39880 1505 aa22.46■■□□□ 1.19
SMIM11B-202ENST00000619874 NESP48681 1621 aa22.44■■□□□ 1.18
SMIM11B-202ENST00000619874 MYCNP04198 464 aaPredicted RBP22.43■■□□□ 1.18
SMIM11B-202ENST00000619874 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
SMIM11B-202ENST00000619874 DNMBPQ6XZF7 1577 aa22.36■■□□□ 1.17
SMIM11B-202ENST00000619874 FAM9AQ8IZU1 332 aaPredicted RBP22.32■■□□□ 1.16
SMIM11B-202ENST00000619874 SOGA1O94964 1423 aa22.31■■□□□ 1.16
SMIM11B-202ENST00000619874 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
SMIM11B-202ENST00000619874 KIF21AQ7Z4S6 1674 aa22.26■■□□□ 1.15
SMIM11B-202ENST00000619874 FGD5Q6ZNL6 1462 aa22.24■■□□□ 1.15
SMIM11B-202ENST00000619874 FOXD4L1Q9NU39 408 aa22.23■■□□□ 1.15
SMIM11B-202ENST00000619874 CSRNP3Q8WYN3 585 aa22.22■■□□□ 1.15
SMIM11B-202ENST00000619874 KIF27Q86VH2 1401 aa22.21■■□□□ 1.15
SMIM11B-202ENST00000619874 LOC105371045A0A1W2PR82 267 aa22.2■■□□□ 1.14
SMIM11B-202ENST00000619874 URB2Q14146 1524 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms