RNA–Protein interactions for RNA: ENST00000619828.4

RDM1-226, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best) BASIC

Gene RDM1, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-226ENST00000619828 NISCHQ9Y2I1 1504 aa12.57□□□□□ -0.4
RDM1-226ENST00000619828 CCDC180Q9P1Z9 1646 aa10.98□□□□□ -0.65
RDM1-226ENST00000619828 DCAF8L2P0C7V8 631 aa10.56□□□□□ -0.72
RDM1-226ENST00000619828 AEBP2Q6ZN18 517 aaPredicted RBP10.54□□□□□ -0.72
RDM1-226ENST00000619828 ZCCHC6Q5VYS8 1495 aaKnown RBP10.52□□□□□ -0.73
RDM1-226ENST00000619828 DCAF1Q9Y4B6 1507 aa10.44□□□□□ -0.74
RDM1-226ENST00000619828 MYO15BQ96JP2 1530 aa10.33□□□□□ -0.76
RDM1-226ENST00000619828 ABCC9O60706 1549 aa10.31□□□□□ -0.76
RDM1-226ENST00000619828 NACADO15069 1562 aa10.27□□□□□ -0.76
RDM1-226ENST00000619828 SHROOM4Q9ULL8 1493 aa10.27□□□□□ -0.77
RDM1-226ENST00000619828 RB1CC1Q8TDY2 1594 aa10.18□□□□□ -0.78
RDM1-226ENST00000619828 CHIC1Q5VXU3 224 aa10.13□□□□□ -0.79
RDM1-226ENST00000619828 SCRIBQ14160 1630 aa10.03□□□□□ -0.8
RDM1-226ENST00000619828 SUPT5HO00267 1087 aaKnown RBP10.02□□□□□ -0.81
RDM1-226ENST00000619828 UNC13AQ9UPW8 1703 aa9.77□□□□□ -0.85
RDM1-226ENST00000619828 PABPN1Q86U42 306 aaKnown RBP eCLIP9.77□□□□□ -0.85
RDM1-226ENST00000619828 BAZ1AQ9NRL2 1556 aaPredicted RBP9.76□□□□□ -0.85
RDM1-226ENST00000619828 RSF1Q96T23 1441 aaPredicted RBP9.75□□□□□ -0.85
RDM1-226ENST00000619828 BICRAQ9NZM4 1560 aa9.68□□□□□ -0.86
RDM1-226ENST00000619828 CECR2Q9BXF3 1484 aa9.68□□□□□ -0.86
RDM1-226ENST00000619828 MROH2BQ7Z745 1585 aa9.65□□□□□ -0.86
RDM1-226ENST00000619828 SMARCA4P51532 1647 aa9.64□□□□□ -0.87
RDM1-226ENST00000619828 SMARCA2P51531 1590 aa9.58□□□□□ -0.88
RDM1-226ENST00000619828 WIZO95785 1651 aa9.57□□□□□ -0.88
RDM1-226ENST00000619828 TOP2AP11388 1531 aaKnown RBP9.54□□□□□ -0.88
RDM1-226ENST00000619828 PEG3Q9GZU2 1588 aa9.52□□□□□ -0.89
RDM1-226ENST00000619828 TRIM41Q8WV44 630 aa9.5□□□□□ -0.89
RDM1-226ENST00000619828 BAZ1BQ9UIG0 1483 aaKnown RBP9.5□□□□□ -0.89
RDM1-226ENST00000619828 ATAD2BQ9ULI0 1458 aa9.49□□□□□ -0.89
RDM1-226ENST00000619828 EIF4G1Q04637 1599 aaKnown RBP9.47□□□□□ -0.89
RDM1-226ENST00000619828 NCAPD3P42695 1498 aa9.45□□□□□ -0.9
RDM1-226ENST00000619828 CCDC88BA6NC98 1476 aa9.44□□□□□ -0.9
RDM1-226ENST00000619828 HMGXB3Q12766 1538 aa9.41□□□□□ -0.9
RDM1-226ENST00000619828 CC2D2AQ9P2K1 1620 aa9.32□□□□□ -0.92
RDM1-226ENST00000619828 WRNQ14191 1432 aaPredicted RBP eCLIP9.25□□□□□ -0.93
RDM1-226ENST00000619828 EEA1Q15075 1411 aa9.25□□□□□ -0.93
RDM1-226ENST00000619828 CADPSQ9ULU8 1353 aa9.24□□□□□ -0.93
RDM1-226ENST00000619828 CFTRP13569 1480 aa9.22□□□□□ -0.93
RDM1-226ENST00000619828 FAM9AQ8IZU1 332 aaPredicted RBP9.22□□□□□ -0.93
RDM1-226ENST00000619828 ABCC8Q09428 1581 aa9.17□□□□□ -0.94
RDM1-226ENST00000619828 CSRNP3Q8WYN3 585 aa9.17□□□□□ -0.94
RDM1-226ENST00000619828 PDS5BQ9NTI5 1447 aa9.16□□□□□ -0.94
RDM1-226ENST00000619828 LOC105371045A0A1W2PR82 267 aa9.16□□□□□ -0.94
RDM1-226ENST00000619828 PRDM2Q13029 1718 aa9.16□□□□□ -0.94
RDM1-226ENST00000619828 LAMC3Q9Y6N6 1575 aa9.14□□□□□ -0.95
RDM1-226ENST00000619828 UBTFP17480 764 aaKnown RBP9.12□□□□□ -0.95
RDM1-226ENST00000619828 TOP2BQ02880 1626 aa9.12□□□□□ -0.95
RDM1-226ENST00000619828 FANCD2Q9BXW9 1451 aa9.1□□□□□ -0.95
RDM1-226ENST00000619828 KIF27Q86VH2 1401 aa9.08□□□□□ -0.96
RDM1-226ENST00000619828 BIVM-ERCC5R4GMW8 1640 aa9.08□□□□□ -0.96
RDM1-226ENST00000619828 CEP164Q9UPV0 1460 aa9.08□□□□□ -0.96
RDM1-226ENST00000619828 SYNJ1O43426 1573 aa9.07□□□□□ -0.96
RDM1-226ENST00000619828 SOGA1O94964 1423 aa9.05□□□□□ -0.96
RDM1-226ENST00000619828 EHMT2Q96KQ7 1210 aa9.05□□□□□ -0.96
RDM1-226ENST00000619828 GOLGA3Q08378 1498 aa9.03□□□□□ -0.96
RDM1-226ENST00000619828 TNIKQ9UKE5 1360 aa9.03□□□□□ -0.96
RDM1-226ENST00000619828 CUX1P39880 1505 aa9.03□□□□□ -0.96
RDM1-226ENST00000619828 DNMBPQ6XZF7 1577 aa9.01□□□□□ -0.97
RDM1-226ENST00000619828 APLP2Q06481 763 aa9□□□□□ -0.97
RDM1-226ENST00000619828 NESP48681 1621 aa8.99□□□□□ -0.97
RDM1-226ENST00000619828 DNAJC5BQ9UF47 199 aa8.98□□□□□ -0.97
RDM1-226ENST00000619828 KIF21BO75037 1637 aa8.98□□□□□ -0.97
RDM1-226ENST00000619828 CUX2O14529 1486 aa8.97□□□□□ -0.97
RDM1-226ENST00000619828 ERCC6Q03468 1493 aa8.97□□□□□ -0.97
RDM1-226ENST00000619828 FGD5Q6ZNL6 1462 aa8.97□□□□□ -0.97
RDM1-226ENST00000619828 TOPBP1Q92547 1522 aa8.97□□□□□ -0.97
RDM1-226ENST00000619828 PHF23Q9BUL5 403 aaPredicted RBP8.97□□□□□ -0.97
RDM1-226ENST00000619828 RUSC2Q8N2Y8 1516 aa8.95□□□□□ -0.98
RDM1-226ENST00000619828 TRIM26Q12899 539 aaPredicted RBP8.95□□□□□ -0.98
RDM1-226ENST00000619828 ERICH3Q5RHP9 1530 aa8.95□□□□□ -0.98
RDM1-226ENST00000619828 MRC2Q9UBG0 1479 aa8.94□□□□□ -0.98
RDM1-226ENST00000619828 CARMIL1Q5VZK9 1371 aa8.93□□□□□ -0.98
RDM1-226ENST00000619828 CEP162Q5TB80 1403 aa8.93□□□□□ -0.98
RDM1-226ENST00000619828 ABCA10Q8WWZ4 1543 aa8.92□□□□□ -0.98
RDM1-226ENST00000619828 IGF1RP08069 1367 aa8.92□□□□□ -0.98
RDM1-226ENST00000619828 POLA1P09884 1462 aaPredicted RBP8.91□□□□□ -0.98
RDM1-226ENST00000619828 RAPGEF2Q9Y4G8 1499 aa8.91□□□□□ -0.98
RDM1-226ENST00000619828 PRXQ9BXM0 1461 aa8.9□□□□□ -0.98
RDM1-226ENST00000619828 URB2Q14146 1524 aaKnown RBP8.9□□□□□ -0.99
RDM1-226ENST00000619828 CLIP1P30622 1438 aa8.89□□□□□ -0.99
RDM1-226ENST00000619828 KIF21AQ7Z4S6 1674 aa8.89□□□□□ -0.99
RDM1-226ENST00000619828 PCGF6Q9BYE7 350 aa8.87□□□□□ -0.99
RDM1-226ENST00000619828 SENP3Q9H4L4 574 aaPredicted RBP8.87□□□□□ -0.99
RDM1-226ENST00000619828 GAPVD1Q14C86 1478 aa8.87□□□□□ -0.99
RDM1-226ENST00000619828 IFT140Q96RY7 1462 aa8.87□□□□□ -0.99
RDM1-226ENST00000619828 CUL7Q14999 1698 aa8.87□□□□□ -0.99
RDM1-226ENST00000619828 RAD54L2Q9Y4B4 1467 aa8.86□□□□□ -0.99
RDM1-226ENST00000619828 RANGAP1P46060 587 aaPredicted RBP8.86□□□□□ -0.99
RDM1-226ENST00000619828 WDR97A6NE52 1622 aa8.85□□□□□ -0.99
RDM1-226ENST00000619828 TDRD9Q8NDG6 1382 aaKnown RBP8.85□□□□□ -0.99
RDM1-226ENST00000619828 WDR62O43379 1518 aa8.83□□□□□ -1
RDM1-226ENST00000619828 GRIN2BQ13224 1484 aa8.82□□□□□ -1
RDM1-226ENST00000619828 VPS8Q8N3P4 1428 aa8.8□□□□□ -1
RDM1-226ENST00000619828 FHAD1B1AJZ9 1412 aa8.8□□□□□ -1
RDM1-226ENST00000619828 CHMP7Q8WUX9 453 aaPredicted RBP8.78□□□□□ -1
RDM1-226ENST00000619828 TARBP1Q13395 1621 aaKnown RBP8.78□□□□□ -1
RDM1-226ENST00000619828 ABCA5Q8WWZ7 1642 aa8.77□□□□□ -1.01
RDM1-226ENST00000619828 ZEB1P37275 1124 aaPredicted RBP8.76□□□□□ -1.01
RDM1-226ENST00000619828 AQRO60306 1485 aaKnown RBP eCLIP8.75□□□□□ -1.01
RDM1-226ENST00000619828 EFCAB5A4FU69 1503 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms