RNA–Protein interactions for RNA: ENST00000618462.4

PDE4DIP-246, Transcript of phosphodiesterase 4D interacting protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-246ENST00000618462 DCAF8L2P0C7V8 631 aa13.4□□□□□ -0.26
PDE4DIP-246ENST00000618462 MYT1Q01538 1121 aa13.35□□□□□ -0.27
PDE4DIP-246ENST00000618462 PELP1Q8IZL8 1130 aaKnown RBP13.16□□□□□ -0.3
PDE4DIP-246ENST00000618462 SUPT5HO00267 1087 aaKnown RBP13.02□□□□□ -0.32
PDE4DIP-246ENST00000618462 EHMT2Q96KQ7 1210 aa12.78□□□□□ -0.36
PDE4DIP-246ENST00000618462 SHROOM4Q9ULL8 1493 aa12.66□□□□□ -0.38
PDE4DIP-246ENST00000618462 ERICH6Q7L0X2 663 aa12.62□□□□□ -0.39
PDE4DIP-246ENST00000618462 PCGF6Q9BYE7 350 aa12.62□□□□□ -0.39
PDE4DIP-246ENST00000618462 CENPBP07199 599 aaPredicted RBP12.58□□□□□ -0.4
PDE4DIP-246ENST00000618462 CCER1Q8TC90 406 aaPredicted RBP12.49□□□□□ -0.41
PDE4DIP-246ENST00000618462 TTBK1Q5TCY1 1321 aaPredicted RBP12.48□□□□□ -0.41
PDE4DIP-246ENST00000618462 APLP2Q06481 763 aa12.46□□□□□ -0.41
PDE4DIP-246ENST00000618462 NISCHQ9Y2I1 1504 aa12.42□□□□□ -0.42
PDE4DIP-246ENST00000618462 ZEB1P37275 1124 aaPredicted RBP12.39□□□□□ -0.43
PDE4DIP-246ENST00000618462 YTHDC1Q96MU7 727 aaKnown RBP12.36□□□□□ -0.43
PDE4DIP-246ENST00000618462 FAM9AQ8IZU1 332 aaPredicted RBP12.33□□□□□ -0.44
PDE4DIP-246ENST00000618462 NEFLP07196 543 aa12.24□□□□□ -0.45
PDE4DIP-246ENST00000618462 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
PDE4DIP-246ENST00000618462 TRIM41Q8WV44 630 aa11.99□□□□□ -0.49
PDE4DIP-246ENST00000618462 HRCP23327 699 aa11.99□□□□□ -0.49
PDE4DIP-246ENST00000618462 DAXXQ9UER7 740 aaPredicted RBP11.96□□□□□ -0.49
PDE4DIP-246ENST00000618462 ATP1B4Q9UN42 357 aaPredicted RBP11.95□□□□□ -0.5
PDE4DIP-246ENST00000618462 PPARGC1BQ86YN6 1023 aaKnown RBP11.94□□□□□ -0.5
PDE4DIP-246ENST00000618462 TRIM26Q12899 539 aaPredicted RBP11.93□□□□□ -0.5
PDE4DIP-246ENST00000618462 UBTFP17480 764 aaKnown RBP11.91□□□□□ -0.5
PDE4DIP-246ENST00000618462 RTL5Q5HYW3 569 aaPredicted RBP11.78□□□□□ -0.52
PDE4DIP-246ENST00000618462 DIEXFQ68CQ4 756 aaKnown RBP11.72□□□□□ -0.53
PDE4DIP-246ENST00000618462 POLR3GLQ9BT43 218 aa11.69□□□□□ -0.54
PDE4DIP-246ENST00000618462 ZNF316A6NFI3 1004 aaPredicted RBP11.68□□□□□ -0.54
PDE4DIP-246ENST00000618462 CNGB1Q14028 1251 aaPredicted RBP11.66□□□□□ -0.54
PDE4DIP-246ENST00000618462 LOC105371045A0A1W2PR82 267 aa11.65□□□□□ -0.54
PDE4DIP-246ENST00000618462 ITGAEP38570 1179 aa11.65□□□□□ -0.54
PDE4DIP-246ENST00000618462 GTF3C3Q9Y5Q9 886 aa11.65□□□□□ -0.54
PDE4DIP-246ENST00000618462 GLIPR1L2Q4G1C9 344 aa11.64□□□□□ -0.55
PDE4DIP-246ENST00000618462 HNRNPUL2Q1KMD3 747 aaKnown RBP11.6□□□□□ -0.55
PDE4DIP-246ENST00000618462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.59□□□□□ -0.55
PDE4DIP-246ENST00000618462 CLSPNQ9HAW4 1339 aa11.59□□□□□ -0.55
PDE4DIP-246ENST00000618462 BCANQ96GW7 911 aa11.55□□□□□ -0.56
PDE4DIP-246ENST00000618462 CDK11AQ9UQ88 783 aaPredicted RBP11.49□□□□□ -0.57
PDE4DIP-246ENST00000618462 CHIC1Q5VXU3 224 aa11.45□□□□□ -0.58
PDE4DIP-246ENST00000618462 EIF5BO60841 1220 aaKnown RBP11.41□□□□□ -0.58
PDE4DIP-246ENST00000618462 ACIN1Q9UKV3 1341 aaKnown RBP11.4□□□□□ -0.59
PDE4DIP-246ENST00000618462 SLC4A1APQ9BWU0 796 aaKnown RBP11.39□□□□□ -0.59
PDE4DIP-246ENST00000618462 MYT1LQ9UL68 1186 aa11.37□□□□□ -0.59
PDE4DIP-246ENST00000618462 ANP32CO43423 234 aa11.33□□□□□ -0.6
PDE4DIP-246ENST00000618462 ANP32AP39687 249 aaKnown RBP11.32□□□□□ -0.6
PDE4DIP-246ENST00000618462 NEUROD1Q13562 356 aa11.31□□□□□ -0.6
PDE4DIP-246ENST00000618462 DCAF1Q9Y4B6 1507 aa11.28□□□□□ -0.6
PDE4DIP-246ENST00000618462 FAM50AQ14320 339 aaKnown RBP11.27□□□□□ -0.61
PDE4DIP-246ENST00000618462 CCDC180Q9P1Z9 1646 aa11.26□□□□□ -0.61
PDE4DIP-246ENST00000618462 NPM2Q86SE8 214 aaKnown RBP11.24□□□□□ -0.61
PDE4DIP-246ENST00000618462 ZBTB47Q9UFB7 747 aaPredicted RBP11.22□□□□□ -0.61
PDE4DIP-246ENST00000618462 BCL11AQ9H165 835 aa11.21□□□□□ -0.62
PDE4DIP-246ENST00000618462 TRIM52Q96A61 297 aa11.19□□□□□ -0.62
PDE4DIP-246ENST00000618462 FKBP8Q14318 412 aa11.19□□□□□ -0.62
PDE4DIP-246ENST00000618462 NBR1Q14596 966 aa11.17□□□□□ -0.62
PDE4DIP-246ENST00000618462 CANXP27824 592 aaKnown RBP11.16□□□□□ -0.62
PDE4DIP-246ENST00000618462 ANP32BQ92688 251 aaKnown RBP11.16□□□□□ -0.62
PDE4DIP-246ENST00000618462 ZNF326Q5BKZ1 582 aaKnown RBP11.13□□□□□ -0.63
PDE4DIP-246ENST00000618462 SCAF1Q9H7N4 1312 aaKnown RBP11.11□□□□□ -0.63
PDE4DIP-246ENST00000618462 HSP90AA1P07900 732 aaKnown RBP11.08□□□□□ -0.64
PDE4DIP-246ENST00000618462 ARXQ96QS3 562 aa11.05□□□□□ -0.64
PDE4DIP-246ENST00000618462 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
PDE4DIP-246ENST00000618462 TNNT2P45379 298 aaPredicted RBP11.03□□□□□ -0.64
PDE4DIP-246ENST00000618462 HNRNPUQ00839 825 aaKnown RBP eCLIP11.02□□□□□ -0.64
PDE4DIP-246ENST00000618462 UPF2Q9HAU5 1272 aaKnown RBP11.02□□□□□ -0.65
PDE4DIP-246ENST00000618462 ANP32EQ9BTT0 268 aa10.98□□□□□ -0.65
PDE4DIP-246ENST00000618462 CCDC136Q96JN2 1154 aa10.98□□□□□ -0.65
PDE4DIP-246ENST00000618462 NEFMP07197 916 aa10.96□□□□□ -0.65
PDE4DIP-246ENST00000618462 DDX10Q13206 875 aaKnown RBP10.96□□□□□ -0.66
PDE4DIP-246ENST00000618462 FAM9BQ8IZU0 186 aa10.96□□□□□ -0.66
PDE4DIP-246ENST00000618462 SALL2Q9Y467 1007 aaPredicted RBP10.93□□□□□ -0.66
PDE4DIP-246ENST00000618462 NCLP19338 710 aaKnown RBP10.92□□□□□ -0.66
PDE4DIP-246ENST00000618462 IRX6P78412 446 aaPredicted RBP10.91□□□□□ -0.66
PDE4DIP-246ENST00000618462 MIER1Q8N108 512 aa10.88□□□□□ -0.67
PDE4DIP-246ENST00000618462 TRIM44Q96DX7 344 aaPredicted RBP10.86□□□□□ -0.67
PDE4DIP-246ENST00000618462 TONSLQ96HA7 1378 aa10.86□□□□□ -0.67
PDE4DIP-246ENST00000618462 TMC1Q8TDI8 760 aa10.85□□□□□ -0.67
PDE4DIP-246ENST00000618462 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.84□□□□□ -0.67
PDE4DIP-246ENST00000618462 RTN4Q9NQC3 1192 aaKnown RBP10.84□□□□□ -0.67
PDE4DIP-246ENST00000618462 CDK11BP21127 795 aaKnown RBP10.83□□□□□ -0.68
PDE4DIP-246ENST00000618462 P3H3Q8IVL6 736 aa10.8□□□□□ -0.68
PDE4DIP-246ENST00000618462 DDRGK1Q96HY6 314 aa10.79□□□□□ -0.68
PDE4DIP-246ENST00000618462 MRS2Q9HD23 443 aa10.78□□□□□ -0.68
PDE4DIP-246ENST00000618462 BECN1Q14457 450 aa10.77□□□□□ -0.69
PDE4DIP-246ENST00000618462 ERICH6BQ5W0A0 696 aa10.76□□□□□ -0.69
PDE4DIP-246ENST00000618462 NAP1L5Q96NT1 182 aaPredicted RBP10.76□□□□□ -0.69
PDE4DIP-246ENST00000618462 ARID3CA6NKF2 412 aa10.74□□□□□ -0.69
PDE4DIP-246ENST00000618462 CSRNP3Q8WYN3 585 aa10.74□□□□□ -0.69
PDE4DIP-246ENST00000618462 HIRIP3Q9BW71 556 aaPredicted RBP10.74□□□□□ -0.69
PDE4DIP-246ENST00000618462 DNTTIP2Q5QJE6 756 aaKnown RBP10.72□□□□□ -0.69
PDE4DIP-246ENST00000618462 WDR43Q15061 677 aaKnown RBP eCLIP10.72□□□□□ -0.69
PDE4DIP-246ENST00000618462 ZNF777Q9ULD5 760 aaPredicted RBP10.71□□□□□ -0.69
PDE4DIP-246ENST00000618462 SUPT16HQ9Y5B9 1047 aaKnown RBP10.71□□□□□ -0.7
PDE4DIP-246ENST00000618462 GOLGA6L22H0YM25 854 aa10.7□□□□□ -0.7
PDE4DIP-246ENST00000618462 LAS1LQ9Y4W2 734 aaKnown RBP10.69□□□□□ -0.7
PDE4DIP-246ENST00000618462 PTMAP06454 111 aaKnown RBP10.69□□□□□ -0.7
PDE4DIP-246ENST00000618462 PPM1GO15355 546 aaPredicted RBP10.68□□□□□ -0.7
PDE4DIP-246ENST00000618462 NOP58Q9Y2X3 529 aaKnown RBP10.68□□□□□ -0.7
PDE4DIP-246ENST00000618462 FBLN2P98095 1184 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms