RNA–Protein interactions for RNA: ENST00000618334.1

C18orf21-208, Transcript of chromosome 18 open reading frame 21, humanhuman

TSL 3 BASIC

Gene C18orf21, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C18orf21-208ENST00000618334 NISCHQ9Y2I1 1504 aa36.69■■■■□ 3.46
C18orf21-208ENST00000618334 CCDC180Q9P1Z9 1646 aa32.05■■■□□ 2.72
C18orf21-208ENST00000618334 ZCCHC6Q5VYS8 1495 aaKnown RBP30.87■■■□□ 2.53
C18orf21-208ENST00000618334 ABCC9O60706 1549 aa30.56■■■□□ 2.48
C18orf21-208ENST00000618334 DCAF1Q9Y4B6 1507 aa30.47■■■□□ 2.47
C18orf21-208ENST00000618334 DCAF8L2P0C7V8 631 aa30.13■■■□□ 2.41
C18orf21-208ENST00000618334 MYO15BQ96JP2 1530 aa30.06■■■□□ 2.4
C18orf21-208ENST00000618334 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
C18orf21-208ENST00000618334 NACADO15069 1562 aa29.8■■■□□ 2.36
C18orf21-208ENST00000618334 RB1CC1Q8TDY2 1594 aa29.5■■■□□ 2.31
C18orf21-208ENST00000618334 SCRIBQ14160 1630 aa29.32■■■□□ 2.28
C18orf21-208ENST00000618334 DNAJC5BQ9UF47 199 aa29.23■■■□□ 2.27
C18orf21-208ENST00000618334 SUPT5HO00267 1087 aaKnown RBP28.89■■■□□ 2.22
C18orf21-208ENST00000618334 UNC13AQ9UPW8 1703 aa28.73■■■□□ 2.19
C18orf21-208ENST00000618334 RSF1Q96T23 1441 aaPredicted RBP28.47■■■□□ 2.15
C18orf21-208ENST00000618334 BAZ1AQ9NRL2 1556 aaPredicted RBP28.41■■■□□ 2.14
C18orf21-208ENST00000618334 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
C18orf21-208ENST00000618334 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
C18orf21-208ENST00000618334 PABPN1Q86U42 306 aaKnown RBP eCLIP28.34■■■□□ 2.13
C18orf21-208ENST00000618334 MROH2BQ7Z745 1585 aa28.25■■■□□ 2.11
C18orf21-208ENST00000618334 SMARCA4P51532 1647 aa28.18■■■□□ 2.1
C18orf21-208ENST00000618334 WIZO95785 1651 aa28.04■■■□□ 2.08
C18orf21-208ENST00000618334 TOP2AP11388 1531 aaKnown RBP27.89■■■□□ 2.06
C18orf21-208ENST00000618334 PEG3Q9GZU2 1588 aa27.87■■■□□ 2.05
C18orf21-208ENST00000618334 SMARCA2P51531 1590 aa27.77■■■□□ 2.04
C18orf21-208ENST00000618334 CHIC1Q5VXU3 224 aa27.76■■■□□ 2.03
C18orf21-208ENST00000618334 ATAD2BQ9ULI0 1458 aa27.64■■■□□ 2.02
C18orf21-208ENST00000618334 EIF4G1Q04637 1599 aaKnown RBP27.61■■■□□ 2.01
C18orf21-208ENST00000618334 CC2D2AQ9P2K1 1620 aa27.57■■■□□ 2
C18orf21-208ENST00000618334 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
C18orf21-208ENST00000618334 CCDC88BA6NC98 1476 aa27.51■■□□□ 1.99
C18orf21-208ENST00000618334 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
C18orf21-208ENST00000618334 NCAPD3P42695 1498 aa27.42■■□□□ 1.98
C18orf21-208ENST00000618334 DNAJC5Q9H3Z4 198 aa27.35■■□□□ 1.97
C18orf21-208ENST00000618334 TRIM41Q8WV44 630 aa27.27■■□□□ 1.96
C18orf21-208ENST00000618334 ABCC8Q09428 1581 aa26.92■■□□□ 1.9
C18orf21-208ENST00000618334 WRNQ14191 1432 aaPredicted RBP eCLIP26.88■■□□□ 1.89
C18orf21-208ENST00000618334 CFTRP13569 1480 aa26.84■■□□□ 1.89
C18orf21-208ENST00000618334 PRDM2Q13029 1718 aa26.82■■□□□ 1.88
C18orf21-208ENST00000618334 EEA1Q15075 1411 aa26.75■■□□□ 1.87
C18orf21-208ENST00000618334 CADPSQ9ULU8 1353 aa26.71■■□□□ 1.87
C18orf21-208ENST00000618334 SYNJ1O43426 1573 aa26.67■■□□□ 1.86
C18orf21-208ENST00000618334 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
C18orf21-208ENST00000618334 BIVM-ERCC5R4GMW8 1640 aa26.62■■□□□ 1.85
C18orf21-208ENST00000618334 FAM9AQ8IZU1 332 aaPredicted RBP26.62■■□□□ 1.85
C18orf21-208ENST00000618334 CUX2O14529 1486 aa26.62■■□□□ 1.85
C18orf21-208ENST00000618334 LOC105371045A0A1W2PR82 267 aa26.58■■□□□ 1.85
C18orf21-208ENST00000618334 LAMC3Q9Y6N6 1575 aa26.53■■□□□ 1.84
C18orf21-208ENST00000618334 SOGA1O94964 1423 aa26.45■■□□□ 1.82
C18orf21-208ENST00000618334 CUX1P39880 1505 aa26.44■■□□□ 1.82
C18orf21-208ENST00000618334 ERCC6Q03468 1493 aa26.44■■□□□ 1.82
C18orf21-208ENST00000618334 FANCD2Q9BXW9 1451 aa26.42■■□□□ 1.82
C18orf21-208ENST00000618334 CSRNP3Q8WYN3 585 aa26.4■■□□□ 1.82
C18orf21-208ENST00000618334 PDS5BQ9NTI5 1447 aa26.32■■□□□ 1.8
C18orf21-208ENST00000618334 CEP164Q9UPV0 1460 aa26.3■■□□□ 1.8
C18orf21-208ENST00000618334 KIF21BO75037 1637 aa26.29■■□□□ 1.8
C18orf21-208ENST00000618334 GOLGA3Q08378 1498 aa26.29■■□□□ 1.8
C18orf21-208ENST00000618334 RUSC2Q8N2Y8 1516 aa26.27■■□□□ 1.8
C18orf21-208ENST00000618334 DNMBPQ6XZF7 1577 aa26.27■■□□□ 1.8
C18orf21-208ENST00000618334 NESP48681 1621 aa26.26■■□□□ 1.79
C18orf21-208ENST00000618334 AEBP2Q6ZN18 517 aaPredicted RBP26.26■■□□□ 1.79
C18orf21-208ENST00000618334 KIF27Q86VH2 1401 aa26.24■■□□□ 1.79
C18orf21-208ENST00000618334 TNIKQ9UKE5 1360 aa26.2■■□□□ 1.79
C18orf21-208ENST00000618334 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
C18orf21-208ENST00000618334 TOPBP1Q92547 1522 aa26.14■■□□□ 1.78
C18orf21-208ENST00000618334 EHMT2Q96KQ7 1210 aa26.13■■□□□ 1.77
C18orf21-208ENST00000618334 ERICH3Q5RHP9 1530 aa26.11■■□□□ 1.77
C18orf21-208ENST00000618334 UBTFP17480 764 aaKnown RBP26.09■■□□□ 1.77
C18orf21-208ENST00000618334 KIF21AQ7Z4S6 1674 aa26.05■■□□□ 1.76
C18orf21-208ENST00000618334 CEP162Q5TB80 1403 aa26.04■■□□□ 1.76
C18orf21-208ENST00000618334 PRXQ9BXM0 1461 aa26.02■■□□□ 1.76
C18orf21-208ENST00000618334 URB2Q14146 1524 aaKnown RBP26.01■■□□□ 1.75
C18orf21-208ENST00000618334 POLA1P09884 1462 aaPredicted RBP26■■□□□ 1.75
C18orf21-208ENST00000618334 ABCA10Q8WWZ4 1543 aa25.99■■□□□ 1.75
C18orf21-208ENST00000618334 RAPGEF2Q9Y4G8 1499 aa25.95■■□□□ 1.74
C18orf21-208ENST00000618334 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
C18orf21-208ENST00000618334 THOC2Q8NI27 1593 aaKnown RBP25.93■■□□□ 1.74
C18orf21-208ENST00000618334 WDR97A6NE52 1622 aa25.86■■□□□ 1.73
C18orf21-208ENST00000618334 IGF1RP08069 1367 aa25.85■■□□□ 1.73
C18orf21-208ENST00000618334 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
C18orf21-208ENST00000618334 CLIP1P30622 1438 aa25.82■■□□□ 1.72
C18orf21-208ENST00000618334 CUL7Q14999 1698 aa25.82■■□□□ 1.72
C18orf21-208ENST00000618334 CARMIL1Q5VZK9 1371 aa25.79■■□□□ 1.72
C18orf21-208ENST00000618334 TRIM26Q12899 539 aaPredicted RBP25.77■■□□□ 1.72
C18orf21-208ENST00000618334 WDR62O43379 1518 aa25.77■■□□□ 1.72
C18orf21-208ENST00000618334 ABCA5Q8WWZ7 1642 aa25.74■■□□□ 1.71
C18orf21-208ENST00000618334 TARBP1Q13395 1621 aaKnown RBP25.71■■□□□ 1.71
C18orf21-208ENST00000618334 GAPVD1Q14C86 1478 aa25.69■■□□□ 1.7
C18orf21-208ENST00000618334 IFT140Q96RY7 1462 aa25.67■■□□□ 1.7
C18orf21-208ENST00000618334 PCGF6Q9BYE7 350 aa25.66■■□□□ 1.7
C18orf21-208ENST00000618334 VPS8Q8N3P4 1428 aa25.64■■□□□ 1.7
C18orf21-208ENST00000618334 TDRD9Q8NDG6 1382 aaKnown RBP25.59■■□□□ 1.69
C18orf21-208ENST00000618334 PBRM1Q86U86 1689 aa25.55■■□□□ 1.68
C18orf21-208ENST00000618334 APLP2Q06481 763 aa25.52■■□□□ 1.68
C18orf21-208ENST00000618334 GRIN2BQ13224 1484 aa25.51■■□□□ 1.67
C18orf21-208ENST00000618334 CTTNBP2Q8WZ74 1663 aa25.51■■□□□ 1.67
C18orf21-208ENST00000618334 ARAP1Q96P48 1450 aa25.47■■□□□ 1.67
C18orf21-208ENST00000618334 FHAD1B1AJZ9 1412 aa25.46■■□□□ 1.67
C18orf21-208ENST00000618334 RANGAP1P46060 587 aaPredicted RBP25.45■■□□□ 1.66
C18orf21-208ENST00000618334 EFCAB5A4FU69 1503 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms