RNA–Protein interactions for RNA: ENST00000617887.4

TMEM200A-204, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM200A, Length 2,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-204ENST00000617887 NISCHQ9Y2I1 1504 aa31.32■■■□□ 2.6
TMEM200A-204ENST00000617887 CCDC180Q9P1Z9 1646 aa26.95■■□□□ 1.9
TMEM200A-204ENST00000617887 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
TMEM200A-204ENST00000617887 SHROOM4Q9ULL8 1493 aa26.32■■□□□ 1.8
TMEM200A-204ENST00000617887 ZCCHC6Q5VYS8 1495 aaKnown RBP26.26■■□□□ 1.79
TMEM200A-204ENST00000617887 ABCC9O60706 1549 aa26.12■■□□□ 1.77
TMEM200A-204ENST00000617887 DCAF1Q9Y4B6 1507 aa25.55■■□□□ 1.68
TMEM200A-204ENST00000617887 SUPT5HO00267 1087 aaKnown RBP25.34■■□□□ 1.65
TMEM200A-204ENST00000617887 SCRIBQ14160 1630 aa25.33■■□□□ 1.65
TMEM200A-204ENST00000617887 NACADO15069 1562 aa25.21■■□□□ 1.63
TMEM200A-204ENST00000617887 MYO15BQ96JP2 1530 aa25.14■■□□□ 1.62
TMEM200A-204ENST00000617887 RB1CC1Q8TDY2 1594 aa25.06■■□□□ 1.6
TMEM200A-204ENST00000617887 PABPN1Q86U42 306 aaKnown RBP eCLIP24.87■■□□□ 1.57
TMEM200A-204ENST00000617887 UNC13AQ9UPW8 1703 aa24.65■■□□□ 1.54
TMEM200A-204ENST00000617887 CECR2Q9BXF3 1484 aa24.62■■□□□ 1.53
TMEM200A-204ENST00000617887 RSF1Q96T23 1441 aaPredicted RBP24.47■■□□□ 1.51
TMEM200A-204ENST00000617887 BICRAQ9NZM4 1560 aa24.42■■□□□ 1.5
TMEM200A-204ENST00000617887 MROH2BQ7Z745 1585 aa24.38■■□□□ 1.49
TMEM200A-204ENST00000617887 PELP1Q8IZL8 1130 aaKnown RBP24.23■■□□□ 1.47
TMEM200A-204ENST00000617887 WIZO95785 1651 aa24.19■■□□□ 1.46
TMEM200A-204ENST00000617887 BAZ1AQ9NRL2 1556 aaPredicted RBP24.11■■□□□ 1.45
TMEM200A-204ENST00000617887 SMARCA4P51532 1647 aa24.04■■□□□ 1.44
TMEM200A-204ENST00000617887 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
TMEM200A-204ENST00000617887 HRCP23327 699 aa23.89■■□□□ 1.41
TMEM200A-204ENST00000617887 ATAD2BQ9ULI0 1458 aa23.72■■□□□ 1.39
TMEM200A-204ENST00000617887 EIF4G1Q04637 1599 aaKnown RBP23.7■■□□□ 1.38
TMEM200A-204ENST00000617887 TOP2AP11388 1531 aaKnown RBP23.7■■□□□ 1.38
TMEM200A-204ENST00000617887 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
TMEM200A-204ENST00000617887 BAZ1BQ9UIG0 1483 aaKnown RBP23.62■■□□□ 1.37
TMEM200A-204ENST00000617887 TRIM41Q8WV44 630 aa23.58■■□□□ 1.37
TMEM200A-204ENST00000617887 SMARCA2P51531 1590 aa23.58■■□□□ 1.36
TMEM200A-204ENST00000617887 MYT1Q01538 1121 aa23.53■■□□□ 1.36
TMEM200A-204ENST00000617887 PEG3Q9GZU2 1588 aa23.52■■□□□ 1.36
TMEM200A-204ENST00000617887 FAM9AQ8IZU1 332 aaPredicted RBP23.51■■□□□ 1.35
TMEM200A-204ENST00000617887 EHMT2Q96KQ7 1210 aa23.47■■□□□ 1.35
TMEM200A-204ENST00000617887 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
TMEM200A-204ENST00000617887 CC2D2AQ9P2K1 1620 aa23.4■■□□□ 1.34
TMEM200A-204ENST00000617887 NCAPD3P42695 1498 aa23.37■■□□□ 1.33
TMEM200A-204ENST00000617887 ABCC8Q09428 1581 aa23.36■■□□□ 1.33
TMEM200A-204ENST00000617887 DNAJC5BQ9UF47 199 aa23.35■■□□□ 1.33
TMEM200A-204ENST00000617887 PPARGC1BQ86YN6 1023 aaKnown RBP23.34■■□□□ 1.33
TMEM200A-204ENST00000617887 HMGXB3Q12766 1538 aa23.23■■□□□ 1.31
TMEM200A-204ENST00000617887 SCAF1Q9H7N4 1312 aaKnown RBP23.04■■□□□ 1.28
TMEM200A-204ENST00000617887 WRNQ14191 1432 aaPredicted RBP eCLIP23.03■■□□□ 1.28
TMEM200A-204ENST00000617887 PCGF6Q9BYE7 350 aa23■■□□□ 1.27
TMEM200A-204ENST00000617887 SOGA1O94964 1423 aa22.96■■□□□ 1.27
TMEM200A-204ENST00000617887 NESP48681 1621 aa22.96■■□□□ 1.27
TMEM200A-204ENST00000617887 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
TMEM200A-204ENST00000617887 CFTRP13569 1480 aa22.93■■□□□ 1.26
TMEM200A-204ENST00000617887 CADPSQ9ULU8 1353 aa22.93■■□□□ 1.26
TMEM200A-204ENST00000617887 RUSC2Q8N2Y8 1516 aa22.92■■□□□ 1.26
TMEM200A-204ENST00000617887 CUX1P39880 1505 aa22.74■■□□□ 1.23
TMEM200A-204ENST00000617887 CSRNP3Q8WYN3 585 aa22.72■■□□□ 1.23
TMEM200A-204ENST00000617887 FANCD2Q9BXW9 1451 aa22.71■■□□□ 1.23
TMEM200A-204ENST00000617887 RANGAP1P46060 587 aaPredicted RBP22.66■■□□□ 1.22
TMEM200A-204ENST00000617887 UBTFP17480 764 aaKnown RBP22.65■■□□□ 1.22
TMEM200A-204ENST00000617887 TOP2BQ02880 1626 aa22.65■■□□□ 1.22
TMEM200A-204ENST00000617887 PRDM2Q13029 1718 aa22.55■■□□□ 1.2
TMEM200A-204ENST00000617887 BIVM-ERCC5R4GMW8 1640 aa22.54■■□□□ 1.2
TMEM200A-204ENST00000617887 FGD5Q6ZNL6 1462 aa22.51■■□□□ 1.19
TMEM200A-204ENST00000617887 LAMC3Q9Y6N6 1575 aa22.5■■□□□ 1.19
TMEM200A-204ENST00000617887 CEP164Q9UPV0 1460 aa22.5■■□□□ 1.19
TMEM200A-204ENST00000617887 RAD54L2Q9Y4B4 1467 aa22.48■■□□□ 1.19
TMEM200A-204ENST00000617887 PDS5BQ9NTI5 1447 aa22.47■■□□□ 1.19
TMEM200A-204ENST00000617887 EEA1Q15075 1411 aa22.45■■□□□ 1.18
TMEM200A-204ENST00000617887 CUX2O14529 1486 aa22.44■■□□□ 1.18
TMEM200A-204ENST00000617887 KIF21AQ7Z4S6 1674 aa22.44■■□□□ 1.18
TMEM200A-204ENST00000617887 URB2Q14146 1524 aaKnown RBP22.43■■□□□ 1.18
TMEM200A-204ENST00000617887 TOPBP1Q92547 1522 aa22.43■■□□□ 1.18
TMEM200A-204ENST00000617887 TTBK1Q5TCY1 1321 aaPredicted RBP22.41■■□□□ 1.18
TMEM200A-204ENST00000617887 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
TMEM200A-204ENST00000617887 KIF27Q86VH2 1401 aa22.38■■□□□ 1.17
TMEM200A-204ENST00000617887 POLA1P09884 1462 aaPredicted RBP22.37■■□□□ 1.17
TMEM200A-204ENST00000617887 GOLGA3Q08378 1498 aa22.35■■□□□ 1.17
TMEM200A-204ENST00000617887 DNMBPQ6XZF7 1577 aa22.34■■□□□ 1.17
TMEM200A-204ENST00000617887 TDRD9Q8NDG6 1382 aaKnown RBP22.33■■□□□ 1.17
TMEM200A-204ENST00000617887 CEP162Q5TB80 1403 aa22.32■■□□□ 1.16
TMEM200A-204ENST00000617887 TNIKQ9UKE5 1360 aa22.29■■□□□ 1.16
TMEM200A-204ENST00000617887 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
TMEM200A-204ENST00000617887 IGF1RP08069 1367 aa22.27■■□□□ 1.16
TMEM200A-204ENST00000617887 ACIN1Q9UKV3 1341 aaKnown RBP22.23■■□□□ 1.15
TMEM200A-204ENST00000617887 KIF21BO75037 1637 aa22.2■■□□□ 1.14
TMEM200A-204ENST00000617887 PRXQ9BXM0 1461 aa22.2■■□□□ 1.14
TMEM200A-204ENST00000617887 CARMIL1Q5VZK9 1371 aa22.17■■□□□ 1.14
TMEM200A-204ENST00000617887 MRC2Q9UBG0 1479 aa22.17■■□□□ 1.14
TMEM200A-204ENST00000617887 ZEB1P37275 1124 aaPredicted RBP22.16■■□□□ 1.14
TMEM200A-204ENST00000617887 ABCA10Q8WWZ4 1543 aa22.14■■□□□ 1.13
TMEM200A-204ENST00000617887 CLIP1P30622 1438 aa22.13■■□□□ 1.13
TMEM200A-204ENST00000617887 NEUROD1Q13562 356 aa22.13■■□□□ 1.13
TMEM200A-204ENST00000617887 AQRO60306 1485 aaKnown RBP eCLIP22.12■■□□□ 1.13
TMEM200A-204ENST00000617887 P3H3Q8IVL6 736 aa22.09■■□□□ 1.13
TMEM200A-204ENST00000617887 GTF3C3Q9Y5Q9 886 aa22.09■■□□□ 1.13
TMEM200A-204ENST00000617887 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
TMEM200A-204ENST00000617887 ZNF608Q9ULD9 1512 aaPredicted RBP22.05■■□□□ 1.12
TMEM200A-204ENST00000617887 GAPVD1Q14C86 1478 aa22.05■■□□□ 1.12
TMEM200A-204ENST00000617887 ERICH3Q5RHP9 1530 aa22.01■■□□□ 1.11
TMEM200A-204ENST00000617887 TARBP1Q13395 1621 aaKnown RBP21.99■■□□□ 1.11
TMEM200A-204ENST00000617887 WDR62O43379 1518 aa21.96■■□□□ 1.11
TMEM200A-204ENST00000617887 WDR97A6NE52 1622 aa21.95■■□□□ 1.1
TMEM200A-204ENST00000617887 FBLN2P98095 1184 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms