RNA–Protein interactions for RNA: ENST00000617575.4

NR2E3-202, Transcript of nuclear receptor subfamily 2 group E member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR2E3, Length 1,998 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3-202ENST00000617575 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.2
NR2E3-202ENST00000617575 CCDC180Q9P1Z9 1646 aa30.58■■■□□ 2.49
NR2E3-202ENST00000617575 ZCCHC6Q5VYS8 1495 aaKnown RBP29.44■■■□□ 2.3
NR2E3-202ENST00000617575 ABCC9O60706 1549 aa29.05■■■□□ 2.24
NR2E3-202ENST00000617575 DCAF1Q9Y4B6 1507 aa29.01■■■□□ 2.23
NR2E3-202ENST00000617575 DCAF8L2P0C7V8 631 aa28.9■■■□□ 2.22
NR2E3-202ENST00000617575 MYO15BQ96JP2 1530 aa28.64■■■□□ 2.18
NR2E3-202ENST00000617575 SHROOM4Q9ULL8 1493 aa28.58■■■□□ 2.17
NR2E3-202ENST00000617575 NACADO15069 1562 aa28.43■■■□□ 2.14
NR2E3-202ENST00000617575 RB1CC1Q8TDY2 1594 aa28.17■■■□□ 2.1
NR2E3-202ENST00000617575 SCRIBQ14160 1630 aa28.05■■■□□ 2.08
NR2E3-202ENST00000617575 UNC13AQ9UPW8 1703 aa27.6■■■□□ 2.01
NR2E3-202ENST00000617575 SUPT5HO00267 1087 aaKnown RBP27.59■■■□□ 2.01
NR2E3-202ENST00000617575 PABPN1Q86U42 306 aaKnown RBP eCLIP27.42■■□□□ 1.98
NR2E3-202ENST00000617575 BICRAQ9NZM4 1560 aa27.41■■□□□ 1.98
NR2E3-202ENST00000617575 RSF1Q96T23 1441 aaPredicted RBP27.17■■□□□ 1.94
NR2E3-202ENST00000617575 CECR2Q9BXF3 1484 aa27.14■■□□□ 1.94
NR2E3-202ENST00000617575 BAZ1AQ9NRL2 1556 aaPredicted RBP27.09■■□□□ 1.93
NR2E3-202ENST00000617575 MROH2BQ7Z745 1585 aa27■■□□□ 1.91
NR2E3-202ENST00000617575 SMARCA4P51532 1647 aa26.92■■□□□ 1.9
NR2E3-202ENST00000617575 WIZO95785 1651 aa26.82■■□□□ 1.88
NR2E3-202ENST00000617575 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
NR2E3-202ENST00000617575 PEG3Q9GZU2 1588 aa26.59■■□□□ 1.85
NR2E3-202ENST00000617575 EIF4G1Q04637 1599 aaKnown RBP26.56■■□□□ 1.84
NR2E3-202ENST00000617575 SMARCA2P51531 1590 aa26.49■■□□□ 1.83
NR2E3-202ENST00000617575 CHIC1Q5VXU3 224 aa26.44■■□□□ 1.82
NR2E3-202ENST00000617575 ATAD2BQ9ULI0 1458 aa26.43■■□□□ 1.82
NR2E3-202ENST00000617575 BAZ1BQ9UIG0 1483 aaKnown RBP26.33■■□□□ 1.81
NR2E3-202ENST00000617575 CCDC88BA6NC98 1476 aa26.27■■□□□ 1.8
NR2E3-202ENST00000617575 CC2D2AQ9P2K1 1620 aa26.23■■□□□ 1.79
NR2E3-202ENST00000617575 NCAPD3P42695 1498 aa26.22■■□□□ 1.79
NR2E3-202ENST00000617575 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
NR2E3-202ENST00000617575 TRIM41Q8WV44 630 aa26■■□□□ 1.75
NR2E3-202ENST00000617575 DNAJC5BQ9UF47 199 aa25.97■■□□□ 1.75
NR2E3-202ENST00000617575 ABCC8Q09428 1581 aa25.75■■□□□ 1.71
NR2E3-202ENST00000617575 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
NR2E3-202ENST00000617575 CFTRP13569 1480 aa25.63■■□□□ 1.69
NR2E3-202ENST00000617575 PRDM2Q13029 1718 aa25.62■■□□□ 1.69
NR2E3-202ENST00000617575 CADPSQ9ULU8 1353 aa25.55■■□□□ 1.68
NR2E3-202ENST00000617575 SYNJ1O43426 1573 aa25.47■■□□□ 1.67
NR2E3-202ENST00000617575 NESP48681 1621 aa25.47■■□□□ 1.67
NR2E3-202ENST00000617575 FAM9AQ8IZU1 332 aaPredicted RBP25.44■■□□□ 1.66
NR2E3-202ENST00000617575 HRCP23327 699 aa25.44■■□□□ 1.66
NR2E3-202ENST00000617575 TOP2BQ02880 1626 aa25.42■■□□□ 1.66
NR2E3-202ENST00000617575 EEA1Q15075 1411 aa25.42■■□□□ 1.66
NR2E3-202ENST00000617575 BIVM-ERCC5R4GMW8 1640 aa25.4■■□□□ 1.66
NR2E3-202ENST00000617575 LOC105371045A0A1W2PR82 267 aa25.38■■□□□ 1.65
NR2E3-202ENST00000617575 LAMC3Q9Y6N6 1575 aa25.34■■□□□ 1.65
NR2E3-202ENST00000617575 SOGA1O94964 1423 aa25.26■■□□□ 1.64
NR2E3-202ENST00000617575 CUX1P39880 1505 aa25.26■■□□□ 1.63
NR2E3-202ENST00000617575 FANCD2Q9BXW9 1451 aa25.26■■□□□ 1.63
NR2E3-202ENST00000617575 CSRNP3Q8WYN3 585 aa25.16■■□□□ 1.62
NR2E3-202ENST00000617575 PDS5BQ9NTI5 1447 aa25.14■■□□□ 1.61
NR2E3-202ENST00000617575 CEP164Q9UPV0 1460 aa25.12■■□□□ 1.61
NR2E3-202ENST00000617575 RUSC2Q8N2Y8 1516 aa25.11■■□□□ 1.61
NR2E3-202ENST00000617575 DNMBPQ6XZF7 1577 aa25.08■■□□□ 1.61
NR2E3-202ENST00000617575 KIF21AQ7Z4S6 1674 aa25.05■■□□□ 1.6
NR2E3-202ENST00000617575 EHMT2Q96KQ7 1210 aa25.04■■□□□ 1.6
NR2E3-202ENST00000617575 GOLGA3Q08378 1498 aa25.03■■□□□ 1.6
NR2E3-202ENST00000617575 KIF21BO75037 1637 aa25.03■■□□□ 1.6
NR2E3-202ENST00000617575 KIF27Q86VH2 1401 aa25.01■■□□□ 1.59
NR2E3-202ENST00000617575 FGD5Q6ZNL6 1462 aa25■■□□□ 1.59
NR2E3-202ENST00000617575 URB2Q14146 1524 aaKnown RBP24.99■■□□□ 1.59
NR2E3-202ENST00000617575 TOPBP1Q92547 1522 aa24.98■■□□□ 1.59
NR2E3-202ENST00000617575 TNIKQ9UKE5 1360 aa24.93■■□□□ 1.58
NR2E3-202ENST00000617575 UBTFP17480 764 aaKnown RBP24.89■■□□□ 1.57
NR2E3-202ENST00000617575 CUX2O14529 1486 aa24.88■■□□□ 1.57
NR2E3-202ENST00000617575 ERICH3Q5RHP9 1530 aa24.86■■□□□ 1.57
NR2E3-202ENST00000617575 POLA1P09884 1462 aaPredicted RBP24.85■■□□□ 1.57
NR2E3-202ENST00000617575 ERCC6Q03468 1493 aa24.85■■□□□ 1.57
NR2E3-202ENST00000617575 MRC2Q9UBG0 1479 aa24.84■■□□□ 1.57
NR2E3-202ENST00000617575 ABCA10Q8WWZ4 1543 aa24.81■■□□□ 1.56
NR2E3-202ENST00000617575 PRXQ9BXM0 1461 aa24.8■■□□□ 1.56
NR2E3-202ENST00000617575 RAD54L2Q9Y4B4 1467 aa24.8■■□□□ 1.56
NR2E3-202ENST00000617575 CEP162Q5TB80 1403 aa24.8■■□□□ 1.56
NR2E3-202ENST00000617575 RAPGEF2Q9Y4G8 1499 aa24.78■■□□□ 1.56
NR2E3-202ENST00000617575 WDR62O43379 1518 aa24.72■■□□□ 1.55
NR2E3-202ENST00000617575 WDR97A6NE52 1622 aa24.71■■□□□ 1.55
NR2E3-202ENST00000617575 THOC2Q8NI27 1593 aaKnown RBP24.71■■□□□ 1.55
NR2E3-202ENST00000617575 PCGF6Q9BYE7 350 aa24.69■■□□□ 1.54
NR2E3-202ENST00000617575 PELP1Q8IZL8 1130 aaKnown RBP24.69■■□□□ 1.54
NR2E3-202ENST00000617575 IGF1RP08069 1367 aa24.68■■□□□ 1.54
NR2E3-202ENST00000617575 CUL7Q14999 1698 aa24.62■■□□□ 1.53
NR2E3-202ENST00000617575 CARMIL1Q5VZK9 1371 aa24.61■■□□□ 1.53
NR2E3-202ENST00000617575 CLIP1P30622 1438 aa24.6■■□□□ 1.53
NR2E3-202ENST00000617575 TARBP1Q13395 1621 aaKnown RBP24.6■■□□□ 1.53
NR2E3-202ENST00000617575 ABCA5Q8WWZ7 1642 aa24.59■■□□□ 1.53
NR2E3-202ENST00000617575 TDRD9Q8NDG6 1382 aaKnown RBP24.59■■□□□ 1.53
NR2E3-202ENST00000617575 GAPVD1Q14C86 1478 aa24.54■■□□□ 1.52
NR2E3-202ENST00000617575 IFT140Q96RY7 1462 aa24.51■■□□□ 1.51
NR2E3-202ENST00000617575 ZNF608Q9ULD9 1512 aaPredicted RBP24.48■■□□□ 1.51
NR2E3-202ENST00000617575 TRIM26Q12899 539 aaPredicted RBP24.47■■□□□ 1.51
NR2E3-202ENST00000617575 AQRO60306 1485 aaKnown RBP eCLIP24.46■■□□□ 1.51
NR2E3-202ENST00000617575 PBRM1Q86U86 1689 aa24.43■■□□□ 1.5
NR2E3-202ENST00000617575 VPS8Q8N3P4 1428 aa24.4■■□□□ 1.5
NR2E3-202ENST00000617575 PPARGC1BQ86YN6 1023 aaKnown RBP24.39■■□□□ 1.49
NR2E3-202ENST00000617575 RANGAP1P46060 587 aaPredicted RBP24.37■■□□□ 1.49
NR2E3-202ENST00000617575 CTTNBP2Q8WZ74 1663 aa24.35■■□□□ 1.49
NR2E3-202ENST00000617575 GRIN2BQ13224 1484 aa24.35■■□□□ 1.49
NR2E3-202ENST00000617575 ZEB1P37275 1124 aaPredicted RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms