RNA–Protein interactions for RNA: ENST00000615206.4

RNF41-212, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF41, Length 5,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-212ENST00000615206 DCAF8L2P0C7V8 631 aa15.44■□□□□ 0.06
RNF41-212ENST00000615206 NISCHQ9Y2I1 1504 aa14.92□□□□□ -0.02
RNF41-212ENST00000615206 FAM9AQ8IZU1 332 aaPredicted RBP14.36□□□□□ -0.11
RNF41-212ENST00000615206 AEBP2Q6ZN18 517 aaPredicted RBP13.8□□□□□ -0.2
RNF41-212ENST00000615206 ABCC9O60706 1549 aa13.51□□□□□ -0.25
RNF41-212ENST00000615206 MYT1LQ9UL68 1186 aa13.4□□□□□ -0.26
RNF41-212ENST00000615206 TRHP20396 242 aaPredicted RBP13.31□□□□□ -0.28
RNF41-212ENST00000615206 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
RNF41-212ENST00000615206 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
RNF41-212ENST00000615206 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
RNF41-212ENST00000615206 FBLN2P98095 1184 aa13.12□□□□□ -0.31
RNF41-212ENST00000615206 TTBK1Q5TCY1 1321 aaPredicted RBP13.03□□□□□ -0.32
RNF41-212ENST00000615206 ESF1Q9H501 851 aaKnown RBP12.99□□□□□ -0.33
RNF41-212ENST00000615206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
RNF41-212ENST00000615206 HNRNPUL2Q1KMD3 747 aaKnown RBP12.97□□□□□ -0.33
RNF41-212ENST00000615206 ATP1B4Q9UN42 357 aaPredicted RBP12.89□□□□□ -0.35
RNF41-212ENST00000615206 PLPPR3Q6T4P5 718 aa12.81□□□□□ -0.36
RNF41-212ENST00000615206 APLP2Q06481 763 aa12.81□□□□□ -0.36
RNF41-212ENST00000615206 ERCC6Q03468 1493 aa12.8□□□□□ -0.36
RNF41-212ENST00000615206 HRCP23327 699 aa12.79□□□□□ -0.36
RNF41-212ENST00000615206 SHROOM4Q9ULL8 1493 aa12.78□□□□□ -0.36
RNF41-212ENST00000615206 CHIC1Q5VXU3 224 aa12.74□□□□□ -0.37
RNF41-212ENST00000615206 SUPT5HO00267 1087 aaKnown RBP12.73□□□□□ -0.37
RNF41-212ENST00000615206 ZCCHC6Q5VYS8 1495 aaKnown RBP12.7□□□□□ -0.38
RNF41-212ENST00000615206 CCDC180Q9P1Z9 1646 aa12.69□□□□□ -0.38
RNF41-212ENST00000615206 FOXD1Q16676 465 aa12.69□□□□□ -0.38
RNF41-212ENST00000615206 DCAF8L1A6NGE4 600 aa12.67□□□□□ -0.38
RNF41-212ENST00000615206 BCANQ96GW7 911 aa12.63□□□□□ -0.39
RNF41-212ENST00000615206 SCAF1Q9H7N4 1312 aaKnown RBP12.6□□□□□ -0.39
RNF41-212ENST00000615206 CHMP7Q8WUX9 453 aaPredicted RBP12.58□□□□□ -0.4
RNF41-212ENST00000615206 ARID4BQ4LE39 1312 aaPredicted RBP12.55□□□□□ -0.4
RNF41-212ENST00000615206 DCAF1Q9Y4B6 1507 aa12.54□□□□□ -0.4
RNF41-212ENST00000615206 RANGAP1P46060 587 aaPredicted RBP12.52□□□□□ -0.41
RNF41-212ENST00000615206 PELP1Q8IZL8 1130 aaKnown RBP12.5□□□□□ -0.41
RNF41-212ENST00000615206 MYO15BQ96JP2 1530 aa12.48□□□□□ -0.41
RNF41-212ENST00000615206 PCGF6Q9BYE7 350 aa12.47□□□□□ -0.41
RNF41-212ENST00000615206 EHMT2Q96KQ7 1210 aa12.47□□□□□ -0.41
RNF41-212ENST00000615206 PHF23Q9BUL5 403 aaPredicted RBP12.43□□□□□ -0.42
RNF41-212ENST00000615206 ZEB1P37275 1124 aaPredicted RBP12.41□□□□□ -0.42
RNF41-212ENST00000615206 STAG3Q9UJ98 1225 aa12.34□□□□□ -0.43
RNF41-212ENST00000615206 OSCARQ8IYS5 282 aa12.33□□□□□ -0.44
RNF41-212ENST00000615206 TRIM26Q12899 539 aaPredicted RBP12.33□□□□□ -0.44
RNF41-212ENST00000615206 RB1CC1Q8TDY2 1594 aa12.32□□□□□ -0.44
RNF41-212ENST00000615206 C14orf37Q86TY3 774 aa12.25□□□□□ -0.45
RNF41-212ENST00000615206 PPARGC1BQ86YN6 1023 aaKnown RBP12.23□□□□□ -0.45
RNF41-212ENST00000615206 CYB5RLQ6IPT4 315 aa12.22□□□□□ -0.45
RNF41-212ENST00000615206 HAP1P54257 671 aaPredicted RBP12.21□□□□□ -0.46
RNF41-212ENST00000615206 A0A0G2JS52 829 aa12.17□□□□□ -0.46
RNF41-212ENST00000615206 MYT1Q01538 1121 aa12.17□□□□□ -0.46
RNF41-212ENST00000615206 SENP3Q9H4L4 574 aaPredicted RBP12.16□□□□□ -0.46
RNF41-212ENST00000615206 UBTFP17480 764 aaKnown RBP12.14□□□□□ -0.47
RNF41-212ENST00000615206 CECR2Q9BXF3 1484 aa12.13□□□□□ -0.47
RNF41-212ENST00000615206 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.09□□□□□ -0.47
RNF41-212ENST00000615206 CDK11AQ9UQ88 783 aaPredicted RBP12.08□□□□□ -0.48
RNF41-212ENST00000615206 LOC105371045A0A1W2PR82 267 aa12.06□□□□□ -0.48
RNF41-212ENST00000615206 MEX3CQ5U5Q3 659 aaKnown RBP12.05□□□□□ -0.48
RNF41-212ENST00000615206 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
RNF41-212ENST00000615206 SCRIBQ14160 1630 aa11.98□□□□□ -0.49
RNF41-212ENST00000615206 SF3B2Q13435 895 aaKnown RBP11.94□□□□□ -0.5
RNF41-212ENST00000615206 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
RNF41-212ENST00000615206 PDS5BQ9NTI5 1447 aa11.94□□□□□ -0.5
RNF41-212ENST00000615206 KCNH8Q96L42 1107 aa11.94□□□□□ -0.5
RNF41-212ENST00000615206 PPP1R15AO75807 674 aaPredicted RBP11.93□□□□□ -0.5
RNF41-212ENST00000615206 MLECQ14165 292 aa11.9□□□□□ -0.51
RNF41-212ENST00000615206 CENPBP07199 599 aaPredicted RBP11.89□□□□□ -0.51
RNF41-212ENST00000615206 ARID3CA6NKF2 412 aa11.87□□□□□ -0.51
RNF41-212ENST00000615206 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
RNF41-212ENST00000615206 CHGAP10645 457 aaKnown RBP11.86□□□□□ -0.51
RNF41-212ENST00000615206 NPM2Q86SE8 214 aaKnown RBP11.85□□□□□ -0.51
RNF41-212ENST00000615206 NACADO15069 1562 aa11.83□□□□□ -0.52
RNF41-212ENST00000615206 ZNF777Q9ULD5 760 aaPredicted RBP11.82□□□□□ -0.52
RNF41-212ENST00000615206 CCDC9Q9Y3X0 531 aaKnown RBP11.81□□□□□ -0.52
RNF41-212ENST00000615206 ACIN1Q9UKV3 1341 aaKnown RBP11.8□□□□□ -0.52
RNF41-212ENST00000615206 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
RNF41-212ENST00000615206 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
RNF41-212ENST00000615206 FAM69CQ0P6D2 419 aa11.77□□□□□ -0.53
RNF41-212ENST00000615206 SLC24A1O60721 1099 aa11.75□□□□□ -0.53
RNF41-212ENST00000615206 CCER1Q8TC90 406 aaPredicted RBP11.75□□□□□ -0.53
RNF41-212ENST00000615206 PLEKHG5O94827 1062 aa11.69□□□□□ -0.54
RNF41-212ENST00000615206 PLEKHD1A6NEE1 506 aa11.68□□□□□ -0.54
RNF41-212ENST00000615206 DNAJC5BQ9UF47 199 aa11.68□□□□□ -0.54
RNF41-212ENST00000615206 DIEXFQ68CQ4 756 aaKnown RBP11.67□□□□□ -0.54
RNF41-212ENST00000615206 LMOD2Q6P5Q4 547 aa11.66□□□□□ -0.54
RNF41-212ENST00000615206 PPP1R1BQ9UD71 204 aaPredicted RBP11.64□□□□□ -0.55
RNF41-212ENST00000615206 BAZ1BQ9UIG0 1483 aaKnown RBP11.63□□□□□ -0.55
RNF41-212ENST00000615206 NPHP1O15259 732 aa11.63□□□□□ -0.55
RNF41-212ENST00000615206 ZBTB7CA1YPR0 619 aa11.63□□□□□ -0.55
RNF41-212ENST00000615206 WRNQ14191 1432 aaPredicted RBP eCLIP11.62□□□□□ -0.55
RNF41-212ENST00000615206 GTF3C3Q9Y5Q9 886 aa11.61□□□□□ -0.55
RNF41-212ENST00000615206 NEUROD1Q13562 356 aa11.61□□□□□ -0.55
RNF41-212ENST00000615206 PIP4K2BP78356 416 aa11.6□□□□□ -0.55
RNF41-212ENST00000615206 BAZ1AQ9NRL2 1556 aaPredicted RBP11.6□□□□□ -0.55
RNF41-212ENST00000615206 EID1Q9Y6B2 187 aa11.58□□□□□ -0.56
RNF41-212ENST00000615206 KLHL34Q8N239 644 aa11.58□□□□□ -0.56
RNF41-212ENST00000615206 P3H3Q8IVL6 736 aa11.57□□□□□ -0.56
RNF41-212ENST00000615206 DISP3Q9P2K9 1392 aa11.57□□□□□ -0.56
RNF41-212ENST00000615206 EEA1Q15075 1411 aa11.55□□□□□ -0.56
RNF41-212ENST00000615206 TSPY4P0CV99 314 aa11.55□□□□□ -0.56
RNF41-212ENST00000615206 TSPY10P0CW01 314 aa11.55□□□□□ -0.56
RNF41-212ENST00000615206 ZNF316A6NFI3 1004 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms