RNA–Protein interactions for RNA: ENST00000614357.4

PDK2-216, Transcript of pyruvate dehydrogenase kinase 2, humanhuman

TSL 5 BASIC

Gene PDK2, Length 2,493 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK2-216ENST00000614357 NISCHQ9Y2I1 1504 aa23.87■■□□□ 1.41
PDK2-216ENST00000614357 CCDC180Q9P1Z9 1646 aa20.5■□□□□ 0.87
PDK2-216ENST00000614357 PELP1Q8IZL8 1130 aaKnown RBP20.24■□□□□ 0.83
PDK2-216ENST00000614357 ZCCHC6Q5VYS8 1495 aaKnown RBP20.1■□□□□ 0.81
PDK2-216ENST00000614357 SHROOM4Q9ULL8 1493 aa20.02■□□□□ 0.8
PDK2-216ENST00000614357 HRCP23327 699 aa19.98■□□□□ 0.79
PDK2-216ENST00000614357 DCAF8L2P0C7V8 631 aa19.93■□□□□ 0.78
PDK2-216ENST00000614357 MYT1Q01538 1121 aa19.66■□□□□ 0.74
PDK2-216ENST00000614357 SUPT5HO00267 1087 aaKnown RBP19.64■□□□□ 0.74
PDK2-216ENST00000614357 DCAF1Q9Y4B6 1507 aa19.61■□□□□ 0.73
PDK2-216ENST00000614357 PPARGC1BQ86YN6 1023 aaKnown RBP19.42■□□□□ 0.7
PDK2-216ENST00000614357 CHIC1Q5VXU3 224 aa19.4■□□□□ 0.7
PDK2-216ENST00000614357 ABCC9O60706 1549 aa19.39■□□□□ 0.69
PDK2-216ENST00000614357 MYO15BQ96JP2 1530 aa19.31■□□□□ 0.68
PDK2-216ENST00000614357 SCAF1Q9H7N4 1312 aaKnown RBP19.2■□□□□ 0.66
PDK2-216ENST00000614357 PCGF6Q9BYE7 350 aa19.16■□□□□ 0.66
PDK2-216ENST00000614357 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
PDK2-216ENST00000614357 NACADO15069 1562 aa19.09■□□□□ 0.65
PDK2-216ENST00000614357 RB1CC1Q8TDY2 1594 aa18.87■□□□□ 0.61
PDK2-216ENST00000614357 TRIM26Q12899 539 aaPredicted RBP18.75■□□□□ 0.59
PDK2-216ENST00000614357 RSF1Q96T23 1441 aaPredicted RBP18.71■□□□□ 0.59
PDK2-216ENST00000614357 LOC105371045A0A1W2PR82 267 aa18.66■□□□□ 0.58
PDK2-216ENST00000614357 TTBK1Q5TCY1 1321 aaPredicted RBP18.66■□□□□ 0.58
PDK2-216ENST00000614357 CECR2Q9BXF3 1484 aa18.64■□□□□ 0.57
PDK2-216ENST00000614357 ZEB1P37275 1124 aaPredicted RBP18.61■□□□□ 0.57
PDK2-216ENST00000614357 ACIN1Q9UKV3 1341 aaKnown RBP18.57■□□□□ 0.56
PDK2-216ENST00000614357 MROH2BQ7Z745 1585 aa18.52■□□□□ 0.56
PDK2-216ENST00000614357 UNC13AQ9UPW8 1703 aa18.48■□□□□ 0.55
PDK2-216ENST00000614357 PABPN1Q86U42 306 aaKnown RBP eCLIP18.45■□□□□ 0.54
PDK2-216ENST00000614357 NEUROD1Q13562 356 aa18.44■□□□□ 0.54
PDK2-216ENST00000614357 TRIM41Q8WV44 630 aa18.42■□□□□ 0.54
PDK2-216ENST00000614357 GTF3C3Q9Y5Q9 886 aa18.39■□□□□ 0.53
PDK2-216ENST00000614357 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
PDK2-216ENST00000614357 WIZO95785 1651 aa18.37■□□□□ 0.53
PDK2-216ENST00000614357 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
PDK2-216ENST00000614357 SMARCA4P51532 1647 aa18.26■□□□□ 0.51
PDK2-216ENST00000614357 CENPBP07199 599 aaPredicted RBP18.23■□□□□ 0.51
PDK2-216ENST00000614357 BCL11AQ9H165 835 aa18.2■□□□□ 0.5
PDK2-216ENST00000614357 FAM9AQ8IZU1 332 aaPredicted RBP18.15■□□□□ 0.5
PDK2-216ENST00000614357 TOP2AP11388 1531 aaKnown RBP18.11■□□□□ 0.49
PDK2-216ENST00000614357 EHMT2Q96KQ7 1210 aa18.09■□□□□ 0.49
PDK2-216ENST00000614357 EIF4G1Q04637 1599 aaKnown RBP18.05■□□□□ 0.48
PDK2-216ENST00000614357 CCDC88BA6NC98 1476 aa18.03■□□□□ 0.48
PDK2-216ENST00000614357 SMARCA2P51531 1590 aa17.98■□□□□ 0.47
PDK2-216ENST00000614357 WRNQ14191 1432 aaPredicted RBP eCLIP17.95■□□□□ 0.46
PDK2-216ENST00000614357 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
PDK2-216ENST00000614357 PRKCSHP14314 528 aaPredicted RBP17.94■□□□□ 0.46
PDK2-216ENST00000614357 ATAD2BQ9ULI0 1458 aa17.93■□□□□ 0.46
PDK2-216ENST00000614357 DIEXFQ68CQ4 756 aaKnown RBP17.89■□□□□ 0.45
PDK2-216ENST00000614357 BAZ1BQ9UIG0 1483 aaKnown RBP17.86■□□□□ 0.45
PDK2-216ENST00000614357 ANP32EQ9BTT0 268 aa17.85■□□□□ 0.45
PDK2-216ENST00000614357 EEA1Q15075 1411 aa17.85■□□□□ 0.45
PDK2-216ENST00000614357 CCER1Q8TC90 406 aaPredicted RBP17.81■□□□□ 0.44
PDK2-216ENST00000614357 ABCC8Q09428 1581 aa17.8■□□□□ 0.44
PDK2-216ENST00000614357 TNIKQ9UKE5 1360 aa17.78■□□□□ 0.44
PDK2-216ENST00000614357 CEP162Q5TB80 1403 aa17.75■□□□□ 0.43
PDK2-216ENST00000614357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
PDK2-216ENST00000614357 NCAPD3P42695 1498 aa17.68■□□□□ 0.42
PDK2-216ENST00000614357 CSRNP3Q8WYN3 585 aa17.63■□□□□ 0.41
PDK2-216ENST00000614357 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
PDK2-216ENST00000614357 GOLGA3Q08378 1498 aa17.61■□□□□ 0.41
PDK2-216ENST00000614357 SOGA1O94964 1423 aa17.59■□□□□ 0.41
PDK2-216ENST00000614357 ERICH6Q7L0X2 663 aa17.58■□□□□ 0.41
PDK2-216ENST00000614357 YTHDC1Q96MU7 727 aaKnown RBP17.56■□□□□ 0.4
PDK2-216ENST00000614357 KIF21BO75037 1637 aa17.51■□□□□ 0.39
PDK2-216ENST00000614357 CEP164Q9UPV0 1460 aa17.5■□□□□ 0.39
PDK2-216ENST00000614357 ZNF316A6NFI3 1004 aaPredicted RBP17.5■□□□□ 0.39
PDK2-216ENST00000614357 TSHZ2Q9NRE2 1034 aa17.5■□□□□ 0.39
PDK2-216ENST00000614357 SYNJ1O43426 1573 aa17.49■□□□□ 0.39
PDK2-216ENST00000614357 RUSC2Q8N2Y8 1516 aa17.48■□□□□ 0.39
PDK2-216ENST00000614357 UBTFP17480 764 aaKnown RBP17.46■□□□□ 0.39
PDK2-216ENST00000614357 CLSPNQ9HAW4 1339 aa17.45■□□□□ 0.38
PDK2-216ENST00000614357 CC2D2AQ9P2K1 1620 aa17.45■□□□□ 0.38
PDK2-216ENST00000614357 APLP2Q06481 763 aa17.44■□□□□ 0.38
PDK2-216ENST00000614357 SUPT16HQ9Y5B9 1047 aaKnown RBP17.4■□□□□ 0.38
PDK2-216ENST00000614357 CFTRP13569 1480 aa17.4■□□□□ 0.38
PDK2-216ENST00000614357 VPS8Q8N3P4 1428 aa17.38■□□□□ 0.37
PDK2-216ENST00000614357 MIER1Q8N108 512 aa17.37■□□□□ 0.37
PDK2-216ENST00000614357 CLIP1P30622 1438 aa17.36■□□□□ 0.37
PDK2-216ENST00000614357 TOP2BQ02880 1626 aa17.33■□□□□ 0.37
PDK2-216ENST00000614357 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
PDK2-216ENST00000614357 CUX1P39880 1505 aa17.27■□□□□ 0.36
PDK2-216ENST00000614357 BIVM-ERCC5R4GMW8 1640 aa17.26■□□□□ 0.35
PDK2-216ENST00000614357 ERICH3Q5RHP9 1530 aa17.21■□□□□ 0.35
PDK2-216ENST00000614357 RAPGEF2Q9Y4G8 1499 aa17.19■□□□□ 0.34
PDK2-216ENST00000614357 RANGAP1P46060 587 aaPredicted RBP17.19■□□□□ 0.34
PDK2-216ENST00000614357 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
PDK2-216ENST00000614357 PRDM2Q13029 1718 aa17.15■□□□□ 0.34
PDK2-216ENST00000614357 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.34
PDK2-216ENST00000614357 NESP48681 1621 aa17.13■□□□□ 0.33
PDK2-216ENST00000614357 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
PDK2-216ENST00000614357 PRXQ9BXM0 1461 aa17.11■□□□□ 0.33
PDK2-216ENST00000614357 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
PDK2-216ENST00000614357 CUX2O14529 1486 aa17.06■□□□□ 0.32
PDK2-216ENST00000614357 DHX57Q6P158 1386 aaKnown RBP17.06■□□□□ 0.32
PDK2-216ENST00000614357 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
PDK2-216ENST00000614357 RRBP1Q9P2E9 1410 aaKnown RBP17.05■□□□□ 0.32
PDK2-216ENST00000614357 ARAP1Q96P48 1450 aa17.03■□□□□ 0.32
PDK2-216ENST00000614357 RBM19Q9Y4C8 960 aaKnown RBP17.02■□□□□ 0.31
PDK2-216ENST00000614357 ANO8Q9HCE9 1232 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms