RNA–Protein interactions for RNA: ENST00000613942.2

CRNDE-212, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 2,601 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-212ENST00000613942 AEBP2Q6ZN18 517 aaPredicted RBP15.25■□□□□ 0.03
CRNDE-212ENST00000613942 CHIC1Q5VXU3 224 aa14.22□□□□□ -0.13
CRNDE-212ENST00000613942 NISCHQ9Y2I1 1504 aa13.46□□□□□ -0.25
CRNDE-212ENST00000613942 SENP3Q9H4L4 574 aaPredicted RBP12.81□□□□□ -0.36
CRNDE-212ENST00000613942 PHF23Q9BUL5 403 aaPredicted RBP12.74□□□□□ -0.37
CRNDE-212ENST00000613942 FOXD1Q16676 465 aa12.1□□□□□ -0.47
CRNDE-212ENST00000613942 CCDC180Q9P1Z9 1646 aa11.67□□□□□ -0.54
CRNDE-212ENST00000613942 PPP6R1Q9UPN7 881 aa11.34□□□□□ -0.59
CRNDE-212ENST00000613942 ZCCHC6Q5VYS8 1495 aaKnown RBP11.3□□□□□ -0.6
CRNDE-212ENST00000613942 PLPPR3Q6T4P5 718 aa11.27□□□□□ -0.61
CRNDE-212ENST00000613942 ADRA2BP18089 450 aa11.26□□□□□ -0.61
CRNDE-212ENST00000613942 PIAS4Q8N2W9 510 aaPredicted RBP11.26□□□□□ -0.61
CRNDE-212ENST00000613942 DCAF8L2P0C7V8 631 aa11.25□□□□□ -0.61
CRNDE-212ENST00000613942 POTEDQ86YR6 584 aa11.25□□□□□ -0.61
CRNDE-212ENST00000613942 ABCC9O60706 1549 aa11.2□□□□□ -0.62
CRNDE-212ENST00000613942 MSH5O43196 834 aa11.18□□□□□ -0.62
CRNDE-212ENST00000613942 SHROOM4Q9ULL8 1493 aa11.09□□□□□ -0.63
CRNDE-212ENST00000613942 DCAF1Q9Y4B6 1507 aa11.07□□□□□ -0.64
CRNDE-212ENST00000613942 MYO15BQ96JP2 1530 aa10.93□□□□□ -0.66
CRNDE-212ENST00000613942 NACADO15069 1562 aa10.9□□□□□ -0.66
CRNDE-212ENST00000613942 SCRIBQ14160 1630 aa10.84□□□□□ -0.67
CRNDE-212ENST00000613942 RB1CC1Q8TDY2 1594 aa10.82□□□□□ -0.68
CRNDE-212ENST00000613942 SUPT5HO00267 1087 aaKnown RBP10.65□□□□□ -0.7
CRNDE-212ENST00000613942 UNC13AQ9UPW8 1703 aa10.63□□□□□ -0.71
CRNDE-212ENST00000613942 PABPN1Q86U42 306 aaKnown RBP eCLIP10.6□□□□□ -0.71
CRNDE-212ENST00000613942 BICRAQ9NZM4 1560 aa10.55□□□□□ -0.72
CRNDE-212ENST00000613942 CECR2Q9BXF3 1484 aa10.53□□□□□ -0.72
CRNDE-212ENST00000613942 RSF1Q96T23 1441 aaPredicted RBP10.47□□□□□ -0.73
CRNDE-212ENST00000613942 MROH2BQ7Z745 1585 aa10.44□□□□□ -0.74
CRNDE-212ENST00000613942 MAPK8IP2Q13387 824 aaPredicted RBP10.41□□□□□ -0.74
CRNDE-212ENST00000613942 BAZ1AQ9NRL2 1556 aaPredicted RBP10.38□□□□□ -0.75
CRNDE-212ENST00000613942 SMARCA4P51532 1647 aa10.35□□□□□ -0.75
CRNDE-212ENST00000613942 WIZO95785 1651 aa10.34□□□□□ -0.75
CRNDE-212ENST00000613942 EIF4G1Q04637 1599 aaKnown RBP10.22□□□□□ -0.77
CRNDE-212ENST00000613942 ATAD2BQ9ULI0 1458 aa10.2□□□□□ -0.78
CRNDE-212ENST00000613942 TOP2AP11388 1531 aaKnown RBP10.19□□□□□ -0.78
CRNDE-212ENST00000613942 PEG3Q9GZU2 1588 aa10.18□□□□□ -0.78
CRNDE-212ENST00000613942 DMRT2Q9Y5R5 561 aa10.17□□□□□ -0.78
CRNDE-212ENST00000613942 SMARCA2P51531 1590 aa10.15□□□□□ -0.78
CRNDE-212ENST00000613942 BAZ1BQ9UIG0 1483 aaKnown RBP10.14□□□□□ -0.79
CRNDE-212ENST00000613942 CCDC88BA6NC98 1476 aa10.14□□□□□ -0.79
CRNDE-212ENST00000613942 NCAPD3P42695 1498 aa10.09□□□□□ -0.79
CRNDE-212ENST00000613942 CC2D2AQ9P2K1 1620 aa10.09□□□□□ -0.79
CRNDE-212ENST00000613942 HMGXB3Q12766 1538 aa10.05□□□□□ -0.8
CRNDE-212ENST00000613942 SCAF1Q9H7N4 1312 aaKnown RBP10.03□□□□□ -0.8
CRNDE-212ENST00000613942 DNAJC5BQ9UF47 199 aa9.98□□□□□ -0.81
CRNDE-212ENST00000613942 TRIM41Q8WV44 630 aa9.97□□□□□ -0.81
CRNDE-212ENST00000613942 ABCC8Q09428 1581 aa9.94□□□□□ -0.82
CRNDE-212ENST00000613942 PPP4R3CPQ6ZMV5 832 aa9.93□□□□□ -0.82
CRNDE-212ENST00000613942 MYT1Q01538 1121 aa9.92□□□□□ -0.82
CRNDE-212ENST00000613942 LOC105371045A0A1W2PR82 267 aa9.9□□□□□ -0.82
CRNDE-212ENST00000613942 PELP1Q8IZL8 1130 aaKnown RBP9.9□□□□□ -0.82
CRNDE-212ENST00000613942 DCAF8L1A6NGE4 600 aa9.88□□□□□ -0.83
CRNDE-212ENST00000613942 CFTRP13569 1480 aa9.87□□□□□ -0.83
CRNDE-212ENST00000613942 CADPSQ9ULU8 1353 aa9.86□□□□□ -0.83
CRNDE-212ENST00000613942 FAM9AQ8IZU1 332 aaPredicted RBP9.86□□□□□ -0.83
CRNDE-212ENST00000613942 WRNQ14191 1432 aaPredicted RBP eCLIP9.84□□□□□ -0.83
CRNDE-212ENST00000613942 NESP48681 1621 aa9.83□□□□□ -0.84
CRNDE-212ENST00000613942 SYNJ1O43426 1573 aa9.81□□□□□ -0.84
CRNDE-212ENST00000613942 EHMT2Q96KQ7 1210 aa9.78□□□□□ -0.84
CRNDE-212ENST00000613942 PCGF6Q9BYE7 350 aa9.77□□□□□ -0.85
CRNDE-212ENST00000613942 CACNB1Q02641 598 aaPredicted RBP9.76□□□□□ -0.85
CRNDE-212ENST00000613942 SOGA1O94964 1423 aa9.76□□□□□ -0.85
CRNDE-212ENST00000613942 FANCD2Q9BXW9 1451 aa9.75□□□□□ -0.85
CRNDE-212ENST00000613942 CUX1P39880 1505 aa9.75□□□□□ -0.85
CRNDE-212ENST00000613942 PRDM2Q13029 1718 aa9.75□□□□□ -0.85
CRNDE-212ENST00000613942 HOXD11P31277 338 aaPredicted RBP9.74□□□□□ -0.85
CRNDE-212ENST00000613942 RUSC2Q8N2Y8 1516 aa9.74□□□□□ -0.85
CRNDE-212ENST00000613942 TOP2BQ02880 1626 aa9.73□□□□□ -0.85
CRNDE-212ENST00000613942 LAMC3Q9Y6N6 1575 aa9.73□□□□□ -0.85
CRNDE-212ENST00000613942 BIVM-ERCC5R4GMW8 1640 aa9.7□□□□□ -0.86
CRNDE-212ENST00000613942 CNKSR2Q8WXI2 1034 aa9.69□□□□□ -0.86
CRNDE-212ENST00000613942 PDS5BQ9NTI5 1447 aa9.69□□□□□ -0.86
CRNDE-212ENST00000613942 CEP164Q9UPV0 1460 aa9.68□□□□□ -0.86
CRNDE-212ENST00000613942 CSRNP3Q8WYN3 585 aa9.66□□□□□ -0.86
CRNDE-212ENST00000613942 KIF21AQ7Z4S6 1674 aa9.65□□□□□ -0.86
CRNDE-212ENST00000613942 URB2Q14146 1524 aaKnown RBP9.64□□□□□ -0.87
CRNDE-212ENST00000613942 FGD5Q6ZNL6 1462 aa9.64□□□□□ -0.87
CRNDE-212ENST00000613942 TOPBP1Q92547 1522 aa9.64□□□□□ -0.87
CRNDE-212ENST00000613942 RNF39Q9H2S5 420 aa9.63□□□□□ -0.87
CRNDE-212ENST00000613942 EEA1Q15075 1411 aa9.63□□□□□ -0.87
CRNDE-212ENST00000613942 DNMBPQ6XZF7 1577 aa9.63□□□□□ -0.87
CRNDE-212ENST00000613942 RNF216Q9NWF9 866 aaPredicted RBP9.63□□□□□ -0.87
CRNDE-212ENST00000613942 TTBK1Q5TCY1 1321 aaPredicted RBP9.62□□□□□ -0.87
CRNDE-212ENST00000613942 HRCP23327 699 aa9.61□□□□□ -0.87
CRNDE-212ENST00000613942 RAD54L2Q9Y4B4 1467 aa9.61□□□□□ -0.87
CRNDE-212ENST00000613942 POLA1P09884 1462 aaPredicted RBP9.6□□□□□ -0.87
CRNDE-212ENST00000613942 PPARGC1BQ86YN6 1023 aaKnown RBP9.6□□□□□ -0.87
CRNDE-212ENST00000613942 CUX2O14529 1486 aa9.59□□□□□ -0.87
CRNDE-212ENST00000613942 KIF27Q86VH2 1401 aa9.58□□□□□ -0.88
CRNDE-212ENST00000613942 ERCC6Q03468 1493 aa9.57□□□□□ -0.88
CRNDE-212ENST00000613942 MRC2Q9UBG0 1479 aa9.56□□□□□ -0.88
CRNDE-212ENST00000613942 UBTFP17480 764 aaKnown RBP9.56□□□□□ -0.88
CRNDE-212ENST00000613942 RAPGEF2Q9Y4G8 1499 aa9.54□□□□□ -0.88
CRNDE-212ENST00000613942 GOLGA3Q08378 1498 aa9.53□□□□□ -0.88
CRNDE-212ENST00000613942 ABCA10Q8WWZ4 1543 aa9.53□□□□□ -0.88
CRNDE-212ENST00000613942 IGF1RP08069 1367 aa9.53□□□□□ -0.88
CRNDE-212ENST00000613942 TDRD9Q8NDG6 1382 aaKnown RBP9.53□□□□□ -0.88
CRNDE-212ENST00000613942 PRXQ9BXM0 1461 aa9.52□□□□□ -0.89
CRNDE-212ENST00000613942 KIF21BO75037 1637 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms