RNA–Protein interactions for RNA: ENST00000613503.4

SPPL2B-209, Transcript of signal peptide peptidase like 2B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPPL2B, Length 3,456 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-209ENST00000613503 QKIQ96PU8 341 aaKnown RBP eCLIP14.02□□□□□ -0.173e-48■■■■■ 259.9
SPPL2B-209ENST00000613503 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.75□□□□□ -0.051e-6■■■■■ 81.8
SPPL2B-209ENST00000613503 EIF4G2P78344 907 aaKnown RBP eCLIP18.85■□□□□ 0.611e-7■■■■■ 66.5
SPPL2B-209ENST00000613503 DKC1O60832 514 aaKnown RBP eCLIP14.45□□□□□ -0.13e-10■■■■■ 66.2
SPPL2B-209ENST00000613503 SF3B1O75533 1304 aaKnown RBP eCLIP14.26□□□□□ -0.133e-7■■■■■ 65.1
SPPL2B-209ENST00000613503 TARDBPQ13148 414 aaKnown RBP eCLIP13.29□□□□□ -0.289e-9■■■■■ 57.2
SPPL2B-209ENST00000613503 AATFQ9NY61 560 aaKnown RBP eCLIP15.48■□□□□ 0.078e-7■■■■■ 55.8
SPPL2B-209ENST00000613503 PTBP1P26599 531 aaKnown RBP eCLIP13.03□□□□□ -0.322e-7■■■■■ 49.2
SPPL2B-209ENST00000613503 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.98□□□□□ -0.012e-6■■■■■ 46.6
SPPL2B-209ENST00000613503 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.75□□□□□ -0.212e-6■■■■■ 44
SPPL2B-209ENST00000613503 AQRO60306 1485 aaKnown RBP eCLIP18.43■□□□□ 0.544e-7■■■■■ 43.1
SPPL2B-209ENST00000613503 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.21□□□□□ -0.292e-6■■■■■ 39.7
SPPL2B-209ENST00000613503 SF3B4Q15427 424 aaKnown RBP eCLIP13.87□□□□□ -0.198e-7■■■■■ 37.2
SPPL2B-209ENST00000613503 DDX6P26196 483 aaKnown RBP eCLIP12.72□□□□□ -0.375e-6■■■■■ 34.8
SPPL2B-209ENST00000613503 TIAL1Q01085 375 aaKnown RBP eCLIP13.51□□□□□ -0.257e-8■■■■■ 34.7
SPPL2B-209ENST00000613503 FTOQ9C0B1 505 aaKnown RBP eCLIP16.21■□□□□ 0.185e-7■■■■■ 33.1
SPPL2B-209ENST00000613503 SRSF7Q16629 238 aaKnown RBP eCLIP11.63□□□□□ -0.556e-7■■■■■ 31.8
SPPL2B-209ENST00000613503 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.8□□□□□ -0.041e-6■■■■■ 29.8
SPPL2B-209ENST00000613503 UPF1Q92900 1129 aaKnown RBP eCLIP13.04□□□□□ -0.329e-7■■■■■ 29.7
SPPL2B-209ENST00000613503 SF3A3Q12874 501 aaKnown RBP eCLIP15.48■□□□□ 0.073e-7■■■■■ 29.1
SPPL2B-209ENST00000613503 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.66□□□□□ -0.221e-7■■■■■ 28.6
SPPL2B-209ENST00000613503 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.47□□□□□ -0.091e-6■■■■■ 28.3
SPPL2B-209ENST00000613503 AKAP1Q92667 903 aaKnown RBP eCLIP13.28□□□□□ -0.281e-7■■■■■ 28.2
SPPL2B-209ENST00000613503 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.07□□□□□ -0.322e-7■■■■■ 28.1
SPPL2B-209ENST00000613503 AARSP49588 968 aaKnown RBP eCLIP15.52■□□□□ 0.088e-7■■■■■ 26.8
SPPL2B-209ENST00000613503 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15□□□□□ -0.012e-6■■■■□ 26.7
SPPL2B-209ENST00000613503 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.06■□□□□ 01e-6■■■■□ 23.8
SPPL2B-209ENST00000613503 NKRFO15226 690 aaKnown RBP eCLIP15.24■□□□□ 0.034e-6■■■■□ 23
SPPL2B-209ENST00000613503 RBFOX2O43251 390 aaKnown RBP eCLIP11.71□□□□□ -0.532e-7■■■■□ 22.2
SPPL2B-209ENST00000613503 ZRANB2O95218 330 aaKnown RBP eCLIP15.97■□□□□ 0.151e-6■■■■□ 22.2
SPPL2B-209ENST00000613503 MATR3P43243 847 aaKnown RBP eCLIP15.7■□□□□ 0.13e-14■■■■□ 22.1
SPPL2B-209ENST00000613503 EWSR1Q01844 656 aaKnown RBP eCLIP12.16□□□□□ -0.461e-6■■■■□ 21.9
SPPL2B-209ENST00000613503 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.79□□□□□ -0.042e-6■■■■□ 21.6
SPPL2B-209ENST00000613503 U2AF2P26368 475 aaKnown RBP eCLIP16.72■□□□□ 0.275e-9■■■■□ 21.4
SPPL2B-209ENST00000613503 PABPN1Q86U42 306 aaKnown RBP eCLIP20.03■□□□□ 0.82e-6■■■■□ 21
SPPL2B-209ENST00000613503 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.64■□□□□ 0.12e-7■■■■□ 21
SPPL2B-209ENST00000613503 NIPBLQ6KC79 2804 aaeCLIP9.7□□□□□ -0.861e-7■■■■□ 20.2
SPPL2B-209ENST00000613503 FUSP35637 526 aaKnown RBP eCLIP9.41□□□□□ -0.92e-6■■■■□ 20.1
SPPL2B-209ENST00000613503 DDX3XO00571 662 aaKnown RBP eCLIP14.94□□□□□ -0.022e-12■■■■□ 19.6
SPPL2B-209ENST00000613503 SRSF1Q07955 248 aaKnown RBP eCLIP10.81□□□□□ -0.684e-6■■■■□ 19.6
SPPL2B-209ENST00000613503 PCBP1Q15365 356 aaKnown RBP eCLIP13.37□□□□□ -0.271e-6■■■■□ 19.5
SPPL2B-209ENST00000613503 HNRNPMP52272 730 aaKnown RBP eCLIP17.7■□□□□ 0.422e-7■■■■□ 19.5
SPPL2B-209ENST00000613503 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.96□□□□□ -0.179e-7■■■■□ 19.3
SPPL2B-209ENST00000613503 PCBP2Q15366 365 aaKnown RBP eCLIP13.4□□□□□ -0.262e-6■■■■□ 19.3
SPPL2B-209ENST00000613503 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.2□□□□□ -0.35e-7■■■□□ 19.2
SPPL2B-209ENST00000613503 AGGF1Q8N302 714 aaeCLIP14.83□□□□□ -0.036e-7■■■□□ 18.9
SPPL2B-209ENST00000613503 EFTUD2Q15029 972 aaKnown RBP eCLIP14.6□□□□□ -0.071e-6■■■□□ 18.6
SPPL2B-209ENST00000613503 NONOQ15233 471 aaKnown RBP eCLIP15.13■□□□□ 0.012e-6■■■□□ 17.9
SPPL2B-209ENST00000613503 HNRNPKP61978 463 aaKnown RBP eCLIP11.84□□□□□ -0.515e-7■■■□□ 17.9
SPPL2B-209ENST00000613503 GTF2F1P35269 517 aaKnown RBP eCLIP16.55■□□□□ 0.242e-6■■■□□ 17.9
SPPL2B-209ENST00000613503 PUM1Q14671 1186 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■■■□□ 17.6
SPPL2B-209ENST00000613503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.38■□□□□ 0.534e-7■■■□□ 16.7
SPPL2B-209ENST00000613503 SMNDC1O75940 238 aaKnown RBP eCLIP14.93□□□□□ -0.023e-6■■■□□ 16.5
SPPL2B-209ENST00000613503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.69■□□□□ 0.262e-6■■■□□ 16.4
SPPL2B-209ENST00000613503 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.4□□□□□ -0.12e-6■■■□□ 16.4
SPPL2B-209ENST00000613503 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.63□□□□□ -0.716e-7■■■□□ 16.4
SPPL2B-209ENST00000613503 PPIGQ13427 754 aaKnown RBP eCLIP13.41□□□□□ -0.267e-7■■■□□ 16.1
SPPL2B-209ENST00000613503 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.76□□□□□ -0.212e-6■■■□□ 15.3
SPPL2B-209ENST00000613503 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.08■□□□□ 0.014e-6■■■□□ 15
SPPL2B-209ENST00000613503 PRPF4O43172 522 aaKnown RBP eCLIP14.59□□□□□ -0.073e-6■■■□□ 15
SPPL2B-209ENST00000613503 NCBP2P52298 156 aaKnown RBP eCLIP12.98□□□□□ -0.332e-7■■■□□ 15
SPPL2B-209ENST00000613503 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.16■□□□□ 0.189e-7■■■□□ 14.8
SPPL2B-209ENST00000613503 WRNQ14191 1432 aaPredicted RBP eCLIP20.06■□□□□ 0.85e-6■■■□□ 14.6
SPPL2B-209ENST00000613503 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.11■□□□□ 0.013e-7■■□□□ 14.2
SPPL2B-209ENST00000613503 U2AF1Q01081 240 aaKnown RBP eCLIP17.36■□□□□ 0.371e-10■■□□□ 14.2
SPPL2B-209ENST00000613503 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.75■□□□□ 0.273e-6■■□□□ 14.2
SPPL2B-209ENST00000613503 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.79□□□□□ -0.22e-8■■□□□ 13.6
SPPL2B-209ENST00000613503 RBM5P52756 815 aaKnown RBP eCLIP14.69□□□□□ -0.069e-8■■□□□ 12.9
SPPL2B-209ENST00000613503 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.35□□□□□ -0.114e-7■■□□□ 12.8
SPPL2B-209ENST00000613503 ZNF622Q969S3 477 aaKnown RBP eCLIP15.31■□□□□ 0.041e-6■■□□□ 12.5
SPPL2B-209ENST00000613503 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.25□□□□□ -0.296e-6■■□□□ 12.4
SPPL2B-209ENST00000613503 RBM15Q96T37 977 aaKnown RBP eCLIP14.75□□□□□ -0.054e-7■■□□□ 12.1
SPPL2B-209ENST00000613503 XRCC6P12956 609 aaKnown RBP eCLIP17.68■□□□□ 0.426e-7■□□□□ 11.3
SPPL2B-209ENST00000613503 LSM11P83369 360 aaKnown RBP eCLIP13.12□□□□□ -0.315e-7■□□□□ 10.8
SPPL2B-209ENST00000613503 GPKOWQ92917 476 aaPredicted RBP eCLIP15.32■□□□□ 0.041e-6■□□□□ 10.4
SPPL2B-209ENST00000613503 HNRNPLP14866 589 aaKnown RBP eCLIP14.08□□□□□ -0.166e-8■□□□□ 10.4
SPPL2B-209ENST00000613503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.89■□□□□ 0.453e-6■□□□□ 10.2
SPPL2B-209ENST00000613503 TIA1P31483 386 aaKnown RBP eCLIP13.15□□□□□ -0.34e-8■□□□□ 10.1
SPPL2B-209ENST00000613503 ZC3H11AO75152 810 aaKnown RBP eCLIP14.34□□□□□ -0.115e-6■□□□□ 9.7
SPPL2B-209ENST00000613503 RBM22Q9NW64 420 aaKnown RBP eCLIP13.81□□□□□ -0.22e-7■□□□□ 9.4
SPPL2B-209ENST00000613503 ILF3Q12906 894 aaKnown RBP eCLIP12.7□□□□□ -0.382e-6■□□□□ 9
SPPL2B-209ENST00000613503 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.85□□□□□ -0.193e-6■□□□□ 8.8
SPPL2B-209ENST00000613503 WDR43Q15061 677 aaKnown RBP eCLIP18■□□□□ 0.478e-10■□□□□ 8.1
Retrieved 83 of 83 RNA–protein pairs in 97.9 ms