RNA–Protein interactions for RNA: ENST00000613374.4

BARD1-210, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 1 (best) BASIC

Gene BARD1, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-210ENST00000613374 NISCHQ9Y2I1 1504 aa21.1■□□□□ 0.97
BARD1-210ENST00000613374 DCAF8L2P0C7V8 631 aa20.11■□□□□ 0.81
BARD1-210ENST00000613374 SHROOM4Q9ULL8 1493 aa19.24■□□□□ 0.67
BARD1-210ENST00000613374 SUPT5HO00267 1087 aaKnown RBP18.94■□□□□ 0.62
BARD1-210ENST00000613374 ABCC9O60706 1549 aa18.19■□□□□ 0.5
BARD1-210ENST00000613374 EHMT2Q96KQ7 1210 aa18.11■□□□□ 0.49
BARD1-210ENST00000613374 PABPN1Q86U42 306 aaKnown RBP eCLIP17.79■□□□□ 0.44
BARD1-210ENST00000613374 FAM9AQ8IZU1 332 aaPredicted RBP17.77■□□□□ 0.44
BARD1-210ENST00000613374 CCDC180Q9P1Z9 1646 aa17.65■□□□□ 0.42
BARD1-210ENST00000613374 ZCCHC6Q5VYS8 1495 aaKnown RBP17.53■□□□□ 0.4
BARD1-210ENST00000613374 TRIM41Q8WV44 630 aa17.44■□□□□ 0.38
BARD1-210ENST00000613374 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
BARD1-210ENST00000613374 RANGAP1P46060 587 aaPredicted RBP17.36■□□□□ 0.37
BARD1-210ENST00000613374 SCRIBQ14160 1630 aa17.35■□□□□ 0.37
BARD1-210ENST00000613374 TTBK1Q5TCY1 1321 aaPredicted RBP17.31■□□□□ 0.36
BARD1-210ENST00000613374 CHIC1Q5VXU3 224 aa17.24■□□□□ 0.35
BARD1-210ENST00000613374 HRCP23327 699 aa17.22■□□□□ 0.35
BARD1-210ENST00000613374 LOC105371045A0A1W2PR82 267 aa17.17■□□□□ 0.34
BARD1-210ENST00000613374 PPARGC1BQ86YN6 1023 aaKnown RBP17.11■□□□□ 0.33
BARD1-210ENST00000613374 UBTFP17480 764 aaKnown RBP17.03■□□□□ 0.32
BARD1-210ENST00000613374 PELP1Q8IZL8 1130 aaKnown RBP16.97■□□□□ 0.31
BARD1-210ENST00000613374 RB1CC1Q8TDY2 1594 aa16.89■□□□□ 0.3
BARD1-210ENST00000613374 ATP1B4Q9UN42 357 aaPredicted RBP16.86■□□□□ 0.29
BARD1-210ENST00000613374 APLP2Q06481 763 aa16.84■□□□□ 0.29
BARD1-210ENST00000613374 NACADO15069 1562 aa16.83■□□□□ 0.28
BARD1-210ENST00000613374 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
BARD1-210ENST00000613374 CECR2Q9BXF3 1484 aa16.79■□□□□ 0.28
BARD1-210ENST00000613374 RSF1Q96T23 1441 aaPredicted RBP16.75■□□□□ 0.27
BARD1-210ENST00000613374 MYO15BQ96JP2 1530 aa16.56■□□□□ 0.24
BARD1-210ENST00000613374 ZEB1P37275 1124 aaPredicted RBP16.51■□□□□ 0.23
BARD1-210ENST00000613374 MROH2BQ7Z745 1585 aa16.5■□□□□ 0.23
BARD1-210ENST00000613374 TRIM26Q12899 539 aaPredicted RBP16.5■□□□□ 0.23
BARD1-210ENST00000613374 ITGAEP38570 1179 aa16.43■□□□□ 0.22
BARD1-210ENST00000613374 FBLN2P98095 1184 aa16.4■□□□□ 0.22
BARD1-210ENST00000613374 MYT1Q01538 1121 aa16.4■□□□□ 0.22
BARD1-210ENST00000613374 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
BARD1-210ENST00000613374 CENPBP07199 599 aaPredicted RBP16.38■□□□□ 0.21
BARD1-210ENST00000613374 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
BARD1-210ENST00000613374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.37■□□□□ 0.21
BARD1-210ENST00000613374 HNRNPUL2Q1KMD3 747 aaKnown RBP16.37■□□□□ 0.21
BARD1-210ENST00000613374 P3H3Q8IVL6 736 aa16.36■□□□□ 0.21
BARD1-210ENST00000613374 BAZ1AQ9NRL2 1556 aaPredicted RBP16.35■□□□□ 0.21
BARD1-210ENST00000613374 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
BARD1-210ENST00000613374 WIZO95785 1651 aa16.29■□□□□ 0.2
BARD1-210ENST00000613374 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
BARD1-210ENST00000613374 ARID3CA6NKF2 412 aa16.28■□□□□ 0.2
BARD1-210ENST00000613374 YTHDC1Q96MU7 727 aaKnown RBP16.25■□□□□ 0.19
BARD1-210ENST00000613374 CCDC88BA6NC98 1476 aa16.19■□□□□ 0.18
BARD1-210ENST00000613374 GTF3C3Q9Y5Q9 886 aa16.16■□□□□ 0.18
BARD1-210ENST00000613374 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
BARD1-210ENST00000613374 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
BARD1-210ENST00000613374 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
BARD1-210ENST00000613374 ACIN1Q9UKV3 1341 aaKnown RBP16.05■□□□□ 0.16
BARD1-210ENST00000613374 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
BARD1-210ENST00000613374 FAM50AQ14320 339 aaKnown RBP16.04■□□□□ 0.16
BARD1-210ENST00000613374 SOGA1O94964 1423 aa16.04■□□□□ 0.16
BARD1-210ENST00000613374 DIEXFQ68CQ4 756 aaKnown RBP16■□□□□ 0.15
BARD1-210ENST00000613374 NEUROD1Q13562 356 aa15.99■□□□□ 0.15
BARD1-210ENST00000613374 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
BARD1-210ENST00000613374 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
BARD1-210ENST00000613374 MYT1LQ9UL68 1186 aa15.97■□□□□ 0.15
BARD1-210ENST00000613374 SMARCA2P51531 1590 aa15.95■□□□□ 0.14
BARD1-210ENST00000613374 TOP2AP11388 1531 aaKnown RBP15.95■□□□□ 0.14
BARD1-210ENST00000613374 CHMP7Q8WUX9 453 aaPredicted RBP15.86■□□□□ 0.13
BARD1-210ENST00000613374 BICRAQ9NZM4 1560 aa15.86■□□□□ 0.13
BARD1-210ENST00000613374 ERCC6Q03468 1493 aa15.84■□□□□ 0.13
BARD1-210ENST00000613374 EIF4G1Q04637 1599 aaKnown RBP15.84■□□□□ 0.13
BARD1-210ENST00000613374 RUSC2Q8N2Y8 1516 aa15.82■□□□□ 0.12
BARD1-210ENST00000613374 CADPSQ9ULU8 1353 aa15.81■□□□□ 0.12
BARD1-210ENST00000613374 CLIP1P30622 1438 aa15.81■□□□□ 0.12
BARD1-210ENST00000613374 TDRD9Q8NDG6 1382 aaKnown RBP15.81■□□□□ 0.12
BARD1-210ENST00000613374 CEP162Q5TB80 1403 aa15.81■□□□□ 0.12
BARD1-210ENST00000613374 CUX2O14529 1486 aa15.8■□□□□ 0.12
BARD1-210ENST00000613374 KIF27Q86VH2 1401 aa15.79■□□□□ 0.12
BARD1-210ENST00000613374 ZNF777Q9ULD5 760 aaPredicted RBP15.79■□□□□ 0.12
BARD1-210ENST00000613374 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
BARD1-210ENST00000613374 TRIM52Q96A61 297 aa15.73■□□□□ 0.11
BARD1-210ENST00000613374 CNGB1Q14028 1251 aaPredicted RBP15.72■□□□□ 0.11
BARD1-210ENST00000613374 NCAPD3P42695 1498 aa15.69■□□□□ 0.1
BARD1-210ENST00000613374 EEA1Q15075 1411 aa15.69■□□□□ 0.1
BARD1-210ENST00000613374 CARMIL1Q5VZK9 1371 aa15.68■□□□□ 0.1
BARD1-210ENST00000613374 NESP48681 1621 aa15.68■□□□□ 0.1
BARD1-210ENST00000613374 CHIC2Q9UKJ5 165 aa15.67■□□□□ 0.1
BARD1-210ENST00000613374 TNIKQ9UKE5 1360 aa15.66■□□□□ 0.1
BARD1-210ENST00000613374 PDS5BQ9NTI5 1447 aa15.66■□□□□ 0.1
BARD1-210ENST00000613374 POLR3GLQ9BT43 218 aa15.66■□□□□ 0.1
BARD1-210ENST00000613374 CEP164Q9UPV0 1460 aa15.65■□□□□ 0.1
BARD1-210ENST00000613374 CC2D2AQ9P2K1 1620 aa15.63■□□□□ 0.09
BARD1-210ENST00000613374 FANCD2Q9BXW9 1451 aa15.63■□□□□ 0.09
BARD1-210ENST00000613374 RAPGEF2Q9Y4G8 1499 aa15.57■□□□□ 0.08
BARD1-210ENST00000613374 KCNH8Q96L42 1107 aa15.57■□□□□ 0.08
BARD1-210ENST00000613374 RAD54L2Q9Y4B4 1467 aa15.56■□□□□ 0.08
BARD1-210ENST00000613374 ZNF316A6NFI3 1004 aaPredicted RBP15.56■□□□□ 0.08
BARD1-210ENST00000613374 MTUS2Q5JR59 1369 aa15.55■□□□□ 0.08
BARD1-210ENST00000613374 ZNF326Q5BKZ1 582 aaKnown RBP15.54■□□□□ 0.08
BARD1-210ENST00000613374 CDK11AQ9UQ88 783 aaPredicted RBP15.54■□□□□ 0.08
BARD1-210ENST00000613374 KANK4Q5T7N3 995 aaPredicted RBP15.53■□□□□ 0.08
BARD1-210ENST00000613374 ERICH6Q7L0X2 663 aa15.52■□□□□ 0.07
BARD1-210ENST00000613374 FGD5Q6ZNL6 1462 aa15.48■□□□□ 0.07
BARD1-210ENST00000613374 BCANQ96GW7 911 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms