RNA–Protein interactions for RNA: ENST00000609936.1

AC004471.2-201, humanhuman

TSL 3 BASIC

Gene AC004471.2, Length 1,514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004471.2-201ENST00000609936 NISCHQ9Y2I1 1504 aa30.39■■■□□ 2.46
AC004471.2-201ENST00000609936 CCDC180Q9P1Z9 1646 aa26.88■■□□□ 1.89
AC004471.2-201ENST00000609936 ABCC9O60706 1549 aa26.19■■□□□ 1.78
AC004471.2-201ENST00000609936 DCAF8L2P0C7V8 631 aa25.5■■□□□ 1.67
AC004471.2-201ENST00000609936 ZCCHC6Q5VYS8 1495 aaKnown RBP25.32■■□□□ 1.64
AC004471.2-201ENST00000609936 NACADO15069 1562 aa25.3■■□□□ 1.64
AC004471.2-201ENST00000609936 RB1CC1Q8TDY2 1594 aa25.28■■□□□ 1.64
AC004471.2-201ENST00000609936 MYO15BQ96JP2 1530 aa25.21■■□□□ 1.63
AC004471.2-201ENST00000609936 DCAF1Q9Y4B6 1507 aa25.16■■□□□ 1.62
AC004471.2-201ENST00000609936 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.52
AC004471.2-201ENST00000609936 PABPN1Q86U42 306 aaKnown RBP eCLIP24.57■■□□□ 1.52
AC004471.2-201ENST00000609936 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
AC004471.2-201ENST00000609936 BICRAQ9NZM4 1560 aa24.43■■□□□ 1.5
AC004471.2-201ENST00000609936 SHROOM4Q9ULL8 1493 aa24.26■■□□□ 1.47
AC004471.2-201ENST00000609936 DNAJC5BQ9UF47 199 aa23.9■■□□□ 1.42
AC004471.2-201ENST00000609936 EIF4G1Q04637 1599 aaKnown RBP23.81■■□□□ 1.4
AC004471.2-201ENST00000609936 CC2D2AQ9P2K1 1620 aa23.66■■□□□ 1.38
AC004471.2-201ENST00000609936 CECR2Q9BXF3 1484 aa23.65■■□□□ 1.38
AC004471.2-201ENST00000609936 BAZ1AQ9NRL2 1556 aaPredicted RBP23.55■■□□□ 1.36
AC004471.2-201ENST00000609936 SMARCA4P51532 1647 aa23.51■■□□□ 1.35
AC004471.2-201ENST00000609936 MROH2BQ7Z745 1585 aa23.41■■□□□ 1.34
AC004471.2-201ENST00000609936 ATAD2BQ9ULI0 1458 aa23.38■■□□□ 1.33
AC004471.2-201ENST00000609936 SMARCA2P51531 1590 aa23.37■■□□□ 1.33
AC004471.2-201ENST00000609936 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
AC004471.2-201ENST00000609936 PEG3Q9GZU2 1588 aa23.28■■□□□ 1.32
AC004471.2-201ENST00000609936 RSF1Q96T23 1441 aaPredicted RBP23.25■■□□□ 1.31
AC004471.2-201ENST00000609936 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
AC004471.2-201ENST00000609936 HMGXB3Q12766 1538 aa23.21■■□□□ 1.31
AC004471.2-201ENST00000609936 WIZO95785 1651 aa23.14■■□□□ 1.29
AC004471.2-201ENST00000609936 TOP2AP11388 1531 aaKnown RBP22.93■■□□□ 1.26
AC004471.2-201ENST00000609936 SUPT5HO00267 1087 aaKnown RBP22.91■■□□□ 1.26
AC004471.2-201ENST00000609936 CADPSQ9ULU8 1353 aa22.72■■□□□ 1.23
AC004471.2-201ENST00000609936 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
AC004471.2-201ENST00000609936 NESP48681 1621 aa22.69■■□□□ 1.22
AC004471.2-201ENST00000609936 LAMC3Q9Y6N6 1575 aa22.68■■□□□ 1.22
AC004471.2-201ENST00000609936 PDS5BQ9NTI5 1447 aa22.61■■□□□ 1.21
AC004471.2-201ENST00000609936 ERCC6Q03468 1493 aa22.61■■□□□ 1.21
AC004471.2-201ENST00000609936 CFTRP13569 1480 aa22.58■■□□□ 1.21
AC004471.2-201ENST00000609936 FANCD2Q9BXW9 1451 aa22.42■■□□□ 1.18
AC004471.2-201ENST00000609936 CEP164Q9UPV0 1460 aa22.37■■□□□ 1.17
AC004471.2-201ENST00000609936 KIF21AQ7Z4S6 1674 aa22.37■■□□□ 1.17
AC004471.2-201ENST00000609936 PRDM2Q13029 1718 aa22.31■■□□□ 1.16
AC004471.2-201ENST00000609936 MRC2Q9UBG0 1479 aa22.3■■□□□ 1.16
AC004471.2-201ENST00000609936 CUX2O14529 1486 aa22.27■■□□□ 1.16
AC004471.2-201ENST00000609936 THOC2Q8NI27 1593 aaKnown RBP22.25■■□□□ 1.15
AC004471.2-201ENST00000609936 WDR62O43379 1518 aa22.17■■□□□ 1.14
AC004471.2-201ENST00000609936 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
AC004471.2-201ENST00000609936 URB2Q14146 1524 aaKnown RBP22.14■■□□□ 1.14
AC004471.2-201ENST00000609936 TOPBP1Q92547 1522 aa22.06■■□□□ 1.12
AC004471.2-201ENST00000609936 DNMBPQ6XZF7 1577 aa22.04■■□□□ 1.12
AC004471.2-201ENST00000609936 CHIC1Q5VXU3 224 aa22.01■■□□□ 1.11
AC004471.2-201ENST00000609936 CUX1P39880 1505 aa21.94■■□□□ 1.1
AC004471.2-201ENST00000609936 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.1
AC004471.2-201ENST00000609936 IFT140Q96RY7 1462 aa21.92■■□□□ 1.1
AC004471.2-201ENST00000609936 POLA1P09884 1462 aaPredicted RBP21.88■■□□□ 1.09
AC004471.2-201ENST00000609936 SOGA1O94964 1423 aa21.87■■□□□ 1.09
AC004471.2-201ENST00000609936 FGD5Q6ZNL6 1462 aa21.87■■□□□ 1.09
AC004471.2-201ENST00000609936 TOP2BQ02880 1626 aa21.81■■□□□ 1.08
AC004471.2-201ENST00000609936 RAD54L2Q9Y4B4 1467 aa21.8■■□□□ 1.08
AC004471.2-201ENST00000609936 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
AC004471.2-201ENST00000609936 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.08
AC004471.2-201ENST00000609936 TARBP1Q13395 1621 aaKnown RBP21.77■■□□□ 1.07
AC004471.2-201ENST00000609936 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
AC004471.2-201ENST00000609936 TDRD9Q8NDG6 1382 aaKnown RBP21.72■■□□□ 1.07
AC004471.2-201ENST00000609936 AQRO60306 1485 aaKnown RBP eCLIP21.7■■□□□ 1.06
AC004471.2-201ENST00000609936 ABCA10Q8WWZ4 1543 aa21.67■■□□□ 1.06
AC004471.2-201ENST00000609936 TRIM41Q8WV44 630 aa21.65■■□□□ 1.06
AC004471.2-201ENST00000609936 WDR97A6NE52 1622 aa21.63■■□□□ 1.05
AC004471.2-201ENST00000609936 EIF4G3O43432 1585 aaKnown RBP21.63■■□□□ 1.05
AC004471.2-201ENST00000609936 GAPVD1Q14C86 1478 aa21.59■■□□□ 1.05
AC004471.2-201ENST00000609936 GRIN2BQ13224 1484 aa21.57■■□□□ 1.04
AC004471.2-201ENST00000609936 FBLN2P98095 1184 aa21.5■■□□□ 1.03
AC004471.2-201ENST00000609936 OSCARQ8IYS5 282 aa21.5■■□□□ 1.03
AC004471.2-201ENST00000609936 ABCA5Q8WWZ7 1642 aa21.5■■□□□ 1.03
AC004471.2-201ENST00000609936 KIF27Q86VH2 1401 aa21.49■■□□□ 1.03
AC004471.2-201ENST00000609936 MAGI1Q96QZ7 1491 aaPredicted RBP21.48■■□□□ 1.03
AC004471.2-201ENST00000609936 CHMP7Q8WUX9 453 aaPredicted RBP21.48■■□□□ 1.03
AC004471.2-201ENST00000609936 SNAPC4Q5SXM2 1469 aa21.47■■□□□ 1.03
AC004471.2-201ENST00000609936 DNAJC5Q9H3Z4 198 aa21.45■■□□□ 1.02
AC004471.2-201ENST00000609936 PBRM1Q86U86 1689 aa21.43■■□□□ 1.02
AC004471.2-201ENST00000609936 ERICH3Q5RHP9 1530 aa21.42■■□□□ 1.02
AC004471.2-201ENST00000609936 SYNJ2O15056 1496 aa21.39■■□□□ 1.02
AC004471.2-201ENST00000609936 IGF1RP08069 1367 aa21.38■■□□□ 1.01
AC004471.2-201ENST00000609936 FHAD1B1AJZ9 1412 aa21.36■■□□□ 1.01
AC004471.2-201ENST00000609936 CHD1O14646 1710 aa21.31■■□□□ 1
AC004471.2-201ENST00000609936 ADAMTS12P58397 1594 aa21.29■■□□□ 1
AC004471.2-201ENST00000609936 RUSC2Q8N2Y8 1516 aa21.28■■□□□ 1
AC004471.2-201ENST00000609936 CARMIL1Q5VZK9 1371 aa21.27■■□□□ 1
AC004471.2-201ENST00000609936 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
AC004471.2-201ENST00000609936 CUL7Q14999 1698 aa21.23■□□□□ 0.99
AC004471.2-201ENST00000609936 CSRNP3Q8WYN3 585 aa21.22■□□□□ 0.99
AC004471.2-201ENST00000609936 EEA1Q15075 1411 aa21.21■□□□□ 0.99
AC004471.2-201ENST00000609936 FAM9AQ8IZU1 332 aaPredicted RBP21.17■□□□□ 0.98
AC004471.2-201ENST00000609936 NUP160Q12769 1436 aa21.16■□□□□ 0.98
AC004471.2-201ENST00000609936 RAPGEF2Q9Y4G8 1499 aa21.14■□□□□ 0.97
AC004471.2-201ENST00000609936 CLASP1Q7Z460 1538 aa21.11■□□□□ 0.97
AC004471.2-201ENST00000609936 CEP170Q5SW79 1584 aa21.1■□□□□ 0.97
AC004471.2-201ENST00000609936 LOC105371045A0A1W2PR82 267 aa21.08■□□□□ 0.96
AC004471.2-201ENST00000609936 PRXQ9BXM0 1461 aa21.07■□□□□ 0.96
AC004471.2-201ENST00000609936 JPH4Q96JJ6 628 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms