RNA–Protein interactions for RNA: ENST00000606999.5

ATRAID-207, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATRAID, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-207ENST00000606999 NISCHQ9Y2I1 1504 aa34.45■■■■□ 3.11
ATRAID-207ENST00000606999 CCDC180Q9P1Z9 1646 aa30.49■■■□□ 2.47
ATRAID-207ENST00000606999 ABCC9O60706 1549 aa29.74■■■□□ 2.35
ATRAID-207ENST00000606999 NACADO15069 1562 aa28.73■■■□□ 2.19
ATRAID-207ENST00000606999 DCAF8L2P0C7V8 631 aa28.73■■■□□ 2.19
ATRAID-207ENST00000606999 ZCCHC6Q5VYS8 1495 aaKnown RBP28.72■■■□□ 2.19
ATRAID-207ENST00000606999 RB1CC1Q8TDY2 1594 aa28.7■■■□□ 2.18
ATRAID-207ENST00000606999 MYO15BQ96JP2 1530 aa28.69■■■□□ 2.18
ATRAID-207ENST00000606999 DCAF1Q9Y4B6 1507 aa28.58■■■□□ 2.17
ATRAID-207ENST00000606999 PABPN1Q86U42 306 aaKnown RBP eCLIP27.86■■■□□ 2.05
ATRAID-207ENST00000606999 UNC13AQ9UPW8 1703 aa27.8■■■□□ 2.04
ATRAID-207ENST00000606999 SCRIBQ14160 1630 aa27.78■■■□□ 2.04
ATRAID-207ENST00000606999 BICRAQ9NZM4 1560 aa27.77■■■□□ 2.04
ATRAID-207ENST00000606999 SHROOM4Q9ULL8 1493 aa27.66■■■□□ 2.02
ATRAID-207ENST00000606999 DNAJC5BQ9UF47 199 aa27.24■■□□□ 1.95
ATRAID-207ENST00000606999 EIF4G1Q04637 1599 aaKnown RBP27.06■■□□□ 1.92
ATRAID-207ENST00000606999 CC2D2AQ9P2K1 1620 aa26.88■■□□□ 1.89
ATRAID-207ENST00000606999 CECR2Q9BXF3 1484 aa26.79■■□□□ 1.88
ATRAID-207ENST00000606999 BAZ1AQ9NRL2 1556 aaPredicted RBP26.7■■□□□ 1.86
ATRAID-207ENST00000606999 SMARCA4P51532 1647 aa26.63■■□□□ 1.85
ATRAID-207ENST00000606999 NCAPD3P42695 1498 aa26.57■■□□□ 1.84
ATRAID-207ENST00000606999 ATAD2BQ9ULI0 1458 aa26.55■■□□□ 1.84
ATRAID-207ENST00000606999 SMARCA2P51531 1590 aa26.51■■□□□ 1.83
ATRAID-207ENST00000606999 MROH2BQ7Z745 1585 aa26.51■■□□□ 1.83
ATRAID-207ENST00000606999 PEG3Q9GZU2 1588 aa26.45■■□□□ 1.82
ATRAID-207ENST00000606999 HMGXB3Q12766 1538 aa26.38■■□□□ 1.81
ATRAID-207ENST00000606999 RSF1Q96T23 1441 aaPredicted RBP26.32■■□□□ 1.8
ATRAID-207ENST00000606999 BAZ1BQ9UIG0 1483 aaKnown RBP26.31■■□□□ 1.8
ATRAID-207ENST00000606999 WIZO95785 1651 aa26.13■■□□□ 1.77
ATRAID-207ENST00000606999 TOP2AP11388 1531 aaKnown RBP25.98■■□□□ 1.75
ATRAID-207ENST00000606999 CADPSQ9ULU8 1353 aa25.81■■□□□ 1.72
ATRAID-207ENST00000606999 LAMC3Q9Y6N6 1575 aa25.77■■□□□ 1.72
ATRAID-207ENST00000606999 NESP48681 1621 aa25.75■■□□□ 1.71
ATRAID-207ENST00000606999 SUPT5HO00267 1087 aaKnown RBP25.7■■□□□ 1.7
ATRAID-207ENST00000606999 CCDC88BA6NC98 1476 aa25.69■■□□□ 1.7
ATRAID-207ENST00000606999 PDS5BQ9NTI5 1447 aa25.67■■□□□ 1.7
ATRAID-207ENST00000606999 ERCC6Q03468 1493 aa25.66■■□□□ 1.7
ATRAID-207ENST00000606999 CFTRP13569 1480 aa25.66■■□□□ 1.7
ATRAID-207ENST00000606999 FANCD2Q9BXW9 1451 aa25.44■■□□□ 1.66
ATRAID-207ENST00000606999 CUX2O14529 1486 aa25.4■■□□□ 1.66
ATRAID-207ENST00000606999 CEP164Q9UPV0 1460 aa25.39■■□□□ 1.65
ATRAID-207ENST00000606999 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
ATRAID-207ENST00000606999 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
ATRAID-207ENST00000606999 THOC2Q8NI27 1593 aaKnown RBP25.31■■□□□ 1.64
ATRAID-207ENST00000606999 WDR62O43379 1518 aa25.23■■□□□ 1.63
ATRAID-207ENST00000606999 PRDM2Q13029 1718 aa25.19■■□□□ 1.62
ATRAID-207ENST00000606999 URB2Q14146 1524 aaKnown RBP25.15■■□□□ 1.62
ATRAID-207ENST00000606999 ABCC8Q09428 1581 aa25.13■■□□□ 1.61
ATRAID-207ENST00000606999 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
ATRAID-207ENST00000606999 DNMBPQ6XZF7 1577 aa24.99■■□□□ 1.59
ATRAID-207ENST00000606999 IFT140Q96RY7 1462 aa24.9■■□□□ 1.58
ATRAID-207ENST00000606999 CUX1P39880 1505 aa24.86■■□□□ 1.57
ATRAID-207ENST00000606999 POLA1P09884 1462 aaPredicted RBP24.83■■□□□ 1.57
ATRAID-207ENST00000606999 WRNQ14191 1432 aaPredicted RBP eCLIP24.81■■□□□ 1.56
ATRAID-207ENST00000606999 SOGA1O94964 1423 aa24.78■■□□□ 1.56
ATRAID-207ENST00000606999 FGD5Q6ZNL6 1462 aa24.77■■□□□ 1.56
ATRAID-207ENST00000606999 TARBP1Q13395 1621 aaKnown RBP24.7■■□□□ 1.54
ATRAID-207ENST00000606999 ZNF608Q9ULD9 1512 aaPredicted RBP24.7■■□□□ 1.54
ATRAID-207ENST00000606999 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.54
ATRAID-207ENST00000606999 TOP2BQ02880 1626 aa24.68■■□□□ 1.54
ATRAID-207ENST00000606999 SYNJ1O43426 1573 aa24.63■■□□□ 1.53
ATRAID-207ENST00000606999 BIVM-ERCC5R4GMW8 1640 aa24.63■■□□□ 1.53
ATRAID-207ENST00000606999 AQRO60306 1485 aaKnown RBP eCLIP24.6■■□□□ 1.532e-7■■■□□ 15.2
ATRAID-207ENST00000606999 TDRD9Q8NDG6 1382 aaKnown RBP24.6■■□□□ 1.53
ATRAID-207ENST00000606999 WDR97A6NE52 1622 aa24.59■■□□□ 1.53
ATRAID-207ENST00000606999 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
ATRAID-207ENST00000606999 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
ATRAID-207ENST00000606999 DNAJC5Q9H3Z4 198 aa24.52■■□□□ 1.52
ATRAID-207ENST00000606999 GRIN2BQ13224 1484 aa24.47■■□□□ 1.51
ATRAID-207ENST00000606999 GAPVD1Q14C86 1478 aa24.47■■□□□ 1.51
ATRAID-207ENST00000606999 OSCARQ8IYS5 282 aa24.42■■□□□ 1.5
ATRAID-207ENST00000606999 MAGI1Q96QZ7 1491 aaPredicted RBP24.39■■□□□ 1.5
ATRAID-207ENST00000606999 ABCA5Q8WWZ7 1642 aa24.39■■□□□ 1.49
ATRAID-207ENST00000606999 SNAPC4Q5SXM2 1469 aa24.36■■□□□ 1.49
ATRAID-207ENST00000606999 TRIM41Q8WV44 630 aa24.34■■□□□ 1.49
ATRAID-207ENST00000606999 KIF27Q86VH2 1401 aa24.32■■□□□ 1.48
ATRAID-207ENST00000606999 CHMP7Q8WUX9 453 aaPredicted RBP24.31■■□□□ 1.48
ATRAID-207ENST00000606999 FBLN2P98095 1184 aa24.3■■□□□ 1.48
ATRAID-207ENST00000606999 SYNJ2O15056 1496 aa24.29■■□□□ 1.48
ATRAID-207ENST00000606999 ERICH3Q5RHP9 1530 aa24.29■■□□□ 1.48
ATRAID-207ENST00000606999 FHAD1B1AJZ9 1412 aa24.23■■□□□ 1.47
ATRAID-207ENST00000606999 IGF1RP08069 1367 aa24.22■■□□□ 1.47
ATRAID-207ENST00000606999 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
ATRAID-207ENST00000606999 ADAMTS12P58397 1594 aa24.15■■□□□ 1.46
ATRAID-207ENST00000606999 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
ATRAID-207ENST00000606999 CHD1O14646 1710 aa24.11■■□□□ 1.45
ATRAID-207ENST00000606999 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
ATRAID-207ENST00000606999 CARMIL1Q5VZK9 1371 aa24.05■■□□□ 1.44
ATRAID-207ENST00000606999 NUP160Q12769 1436 aa24.05■■□□□ 1.44
ATRAID-207ENST00000606999 CLASP1Q7Z460 1538 aa24.02■■□□□ 1.44
ATRAID-207ENST00000606999 CUL7Q14999 1698 aa24.02■■□□□ 1.44
ATRAID-207ENST00000606999 RUSC2Q8N2Y8 1516 aa24.01■■□□□ 1.43
ATRAID-207ENST00000606999 EEA1Q15075 1411 aa23.96■■□□□ 1.43
ATRAID-207ENST00000606999 CEP170Q5SW79 1584 aa23.93■■□□□ 1.42
ATRAID-207ENST00000606999 ARHGEF11O15085 1522 aa23.91■■□□□ 1.42
ATRAID-207ENST00000606999 CSRNP3Q8WYN3 585 aa23.91■■□□□ 1.42
ATRAID-207ENST00000606999 RAPGEF2Q9Y4G8 1499 aa23.9■■□□□ 1.42
ATRAID-207ENST00000606999 PRXQ9BXM0 1461 aa23.87■■□□□ 1.41
ATRAID-207ENST00000606999 KIAA0586Q9BVV6 1533 aa23.86■■□□□ 1.41
ATRAID-207ENST00000606999 JPH4Q96JJ6 628 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms