RNA–Protein interactions for RNA: ENST00000606570.1

SNX5-218, Transcript of sorting nexin 5, humanhuman

Gene SNX5, Length 3,931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-218ENST00000606570 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
SNX5-218ENST00000606570 MYT1Q01538 1121 aa12.52□□□□□ -0.41
SNX5-218ENST00000606570 SLC24A1O60721 1099 aa12.16□□□□□ -0.46
SNX5-218ENST00000606570 TTBK1Q5TCY1 1321 aaPredicted RBP12.08□□□□□ -0.48
SNX5-218ENST00000606570 PRKCSHP14314 528 aaPredicted RBP12□□□□□ -0.49
SNX5-218ENST00000606570 NISCHQ9Y2I1 1504 aa11.88□□□□□ -0.51
SNX5-218ENST00000606570 ERICH6Q7L0X2 663 aa11.8□□□□□ -0.52
SNX5-218ENST00000606570 APLP2Q06481 763 aa11.64□□□□□ -0.55
SNX5-218ENST00000606570 CHIC1Q5VXU3 224 aa11.62□□□□□ -0.55
SNX5-218ENST00000606570 EHMT2Q96KQ7 1210 aa11.53□□□□□ -0.56
SNX5-218ENST00000606570 BCL11AQ9H165 835 aa11.47□□□□□ -0.57
SNX5-218ENST00000606570 DAXXQ9UER7 740 aaPredicted RBP11.42□□□□□ -0.58
SNX5-218ENST00000606570 FAM9AQ8IZU1 332 aaPredicted RBP11.27□□□□□ -0.61
SNX5-218ENST00000606570 EIF5BO60841 1220 aaKnown RBP11.18□□□□□ -0.62
SNX5-218ENST00000606570 SCAF1Q9H7N4 1312 aaKnown RBP11.12□□□□□ -0.63
SNX5-218ENST00000606570 PLPPR3Q6T4P5 718 aa11.07□□□□□ -0.64
SNX5-218ENST00000606570 HRCP23327 699 aa11.06□□□□□ -0.64
SNX5-218ENST00000606570 AEBP2Q6ZN18 517 aaPredicted RBP11.05□□□□□ -0.64
SNX5-218ENST00000606570 SUPT5HO00267 1087 aaKnown RBP10.96□□□□□ -0.65
SNX5-218ENST00000606570 CENPBP07199 599 aaPredicted RBP10.96□□□□□ -0.65
SNX5-218ENST00000606570 PLEKHG5O94827 1062 aa10.94□□□□□ -0.66
SNX5-218ENST00000606570 SHROOM4Q9ULL8 1493 aa10.91□□□□□ -0.66
SNX5-218ENST00000606570 RTN4Q9NQC3 1192 aaKnown RBP10.88□□□□□ -0.67
SNX5-218ENST00000606570 PCGF6Q9BYE7 350 aa10.82□□□□□ -0.68
SNX5-218ENST00000606570 PPARGC1BQ86YN6 1023 aaKnown RBP10.81□□□□□ -0.68
SNX5-218ENST00000606570 PODXL2Q9NZ53 605 aa10.74□□□□□ -0.69
SNX5-218ENST00000606570 NCBP3Q53F19 620 aaKnown RBP10.66□□□□□ -0.7
SNX5-218ENST00000606570 ANP32EQ9BTT0 268 aa10.64□□□□□ -0.71
SNX5-218ENST00000606570 ANO8Q9HCE9 1232 aaPredicted RBP10.62□□□□□ -0.71
SNX5-218ENST00000606570 UBE2Q2Q8WVN8 375 aa10.62□□□□□ -0.71
SNX5-218ENST00000606570 RANGAP1P46060 587 aaPredicted RBP10.6□□□□□ -0.71
SNX5-218ENST00000606570 PHF23Q9BUL5 403 aaPredicted RBP10.59□□□□□ -0.71
SNX5-218ENST00000606570 DCAF8L2P0C7V8 631 aa10.56□□□□□ -0.72
SNX5-218ENST00000606570 KLHL34Q8N239 644 aa10.55□□□□□ -0.72
SNX5-218ENST00000606570 GTF3C3Q9Y5Q9 886 aa10.55□□□□□ -0.72
SNX5-218ENST00000606570 CSRNP3Q8WYN3 585 aa10.55□□□□□ -0.72
SNX5-218ENST00000606570 ACIN1Q9UKV3 1341 aaKnown RBP10.52□□□□□ -0.72
SNX5-218ENST00000606570 PKNOX2Q96KN3 472 aa10.52□□□□□ -0.73
SNX5-218ENST00000606570 KCNA4P22459 653 aa10.51□□□□□ -0.73
SNX5-218ENST00000606570 ARXQ96QS3 562 aa10.42□□□□□ -0.74
SNX5-218ENST00000606570 TIMELESSQ9UNS1 1208 aa10.42□□□□□ -0.74
SNX5-218ENST00000606570 NEUROD1Q13562 356 aa10.42□□□□□ -0.74
SNX5-218ENST00000606570 AMER1Q5JTC6 1135 aaPredicted RBP10.39□□□□□ -0.75
SNX5-218ENST00000606570 LOC105371045A0A1W2PR82 267 aa10.38□□□□□ -0.75
SNX5-218ENST00000606570 CCDC136Q96JN2 1154 aa10.37□□□□□ -0.75
SNX5-218ENST00000606570 PDIA4P13667 645 aaKnown RBP10.34□□□□□ -0.75
SNX5-218ENST00000606570 TRIM26Q12899 539 aaPredicted RBP10.34□□□□□ -0.75
SNX5-218ENST00000606570 MYO15BQ96JP2 1530 aa10.33□□□□□ -0.76
SNX5-218ENST00000606570 NEFLP07196 543 aa10.33□□□□□ -0.76
SNX5-218ENST00000606570 PDE4CQ08493 712 aa10.32□□□□□ -0.76
SNX5-218ENST00000606570 ZEB1P37275 1124 aaPredicted RBP10.31□□□□□ -0.76
SNX5-218ENST00000606570 SALL2Q9Y467 1007 aaPredicted RBP10.3□□□□□ -0.76
SNX5-218ENST00000606570 TULP1O00294 542 aaPredicted RBP10.27□□□□□ -0.77
SNX5-218ENST00000606570 CCDC180Q9P1Z9 1646 aa10.18□□□□□ -0.78
SNX5-218ENST00000606570 A0A0U1RQG5 324 aaPredicted RBP10.17□□□□□ -0.78
SNX5-218ENST00000606570 BCL11BQ9C0K0 894 aaPredicted RBP10.15□□□□□ -0.78
SNX5-218ENST00000606570 HOMEZQ8IX15 550 aa10.15□□□□□ -0.78
SNX5-218ENST00000606570 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.14□□□□□ -0.79
SNX5-218ENST00000606570 DCAF1Q9Y4B6 1507 aa10.14□□□□□ -0.79
SNX5-218ENST00000606570 CCER1Q8TC90 406 aaPredicted RBP10.1□□□□□ -0.79
SNX5-218ENST00000606570 FGD1P98174 961 aa10.07□□□□□ -0.8
SNX5-218ENST00000606570 ERICH6BQ5W0A0 696 aa10.07□□□□□ -0.8
SNX5-218ENST00000606570 TRIM41Q8WV44 630 aa10.07□□□□□ -0.8
SNX5-218ENST00000606570 HAP1P54257 671 aaPredicted RBP10.04□□□□□ -0.8
SNX5-218ENST00000606570 TAF7LQ5H9L4 462 aa10.03□□□□□ -0.8
SNX5-218ENST00000606570 DHX37Q8IY37 1157 aaKnown RBP10.02□□□□□ -0.8
SNX5-218ENST00000606570 ZCCHC6Q5VYS8 1495 aaKnown RBP10.02□□□□□ -0.81
SNX5-218ENST00000606570 YTHDC1Q96MU7 727 aaKnown RBP10.01□□□□□ -0.81
SNX5-218ENST00000606570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.01□□□□□ -0.81
SNX5-218ENST00000606570 DEKP35659 375 aaKnown RBP10.01□□□□□ -0.81
SNX5-218ENST00000606570 NPM2Q86SE8 214 aaKnown RBP10.01□□□□□ -0.81
SNX5-218ENST00000606570 CLSPNQ9HAW4 1339 aa10.01□□□□□ -0.81
SNX5-218ENST00000606570 GLIPR1L2Q4G1C9 344 aa10□□□□□ -0.81
SNX5-218ENST00000606570 SLC4A1APQ9BWU0 796 aaKnown RBP9.99□□□□□ -0.81
SNX5-218ENST00000606570 C14orf37Q86TY3 774 aa9.98□□□□□ -0.81
SNX5-218ENST00000606570 DIEXFQ68CQ4 756 aaKnown RBP9.98□□□□□ -0.81
SNX5-218ENST00000606570 CHMP4AQ9BY43 222 aa9.98□□□□□ -0.81
SNX5-218ENST00000606570 TSHZ2Q9NRE2 1034 aa9.96□□□□□ -0.81
SNX5-218ENST00000606570 TAOK2Q9UL54 1235 aa9.95□□□□□ -0.82
SNX5-218ENST00000606570 MYT1LQ9UL68 1186 aa9.93□□□□□ -0.82
SNX5-218ENST00000606570 TPRNQ4KMQ1 711 aa9.93□□□□□ -0.82
SNX5-218ENST00000606570 AAMPQ13685 434 aa9.93□□□□□ -0.82
SNX5-218ENST00000606570 ZMYND15Q9H091 742 aa9.93□□□□□ -0.82
SNX5-218ENST00000606570 RBM10P98175 930 aaKnown RBP9.92□□□□□ -0.82
SNX5-218ENST00000606570 PAXIP1Q6ZW49 1069 aaPredicted RBP9.91□□□□□ -0.82
SNX5-218ENST00000606570 VSIG10Q8N0Z9 540 aa9.9□□□□□ -0.82
SNX5-218ENST00000606570 BRD2P25440 801 aaKnown RBP9.88□□□□□ -0.83
SNX5-218ENST00000606570 SAMD1Q6SPF0 538 aaPredicted RBP9.81□□□□□ -0.84
SNX5-218ENST00000606570 NAP1L5Q96NT1 182 aaPredicted RBP9.81□□□□□ -0.84
SNX5-218ENST00000606570 BCANQ96GW7 911 aa9.78□□□□□ -0.84
SNX5-218ENST00000606570 RSPH6AQ9H0K4 717 aa9.76□□□□□ -0.85
SNX5-218ENST00000606570 ADRA2BP18089 450 aa9.76□□□□□ -0.85
SNX5-218ENST00000606570 IL27Q8NEV9 243 aa9.75□□□□□ -0.85
SNX5-218ENST00000606570 ZNF326Q5BKZ1 582 aaKnown RBP9.75□□□□□ -0.85
SNX5-218ENST00000606570 IRX6P78412 446 aaPredicted RBP9.74□□□□□ -0.85
SNX5-218ENST00000606570 ZNF316A6NFI3 1004 aaPredicted RBP9.73□□□□□ -0.85
SNX5-218ENST00000606570 CDK11BP21127 795 aaKnown RBP9.7□□□□□ -0.86
SNX5-218ENST00000606570 CDK11AQ9UQ88 783 aaPredicted RBP9.7□□□□□ -0.86
SNX5-218ENST00000606570 SUPT16HQ9Y5B9 1047 aaKnown RBP9.69□□□□□ -0.86
SNX5-218ENST00000606570 RSPH4AQ5TD94 716 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms