RNA–Protein interactions for RNA: ENST00000604293.1

AC110048.1-201, humanhuman

BASIC

Gene AC110048.1, Length 2,157 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC110048.1-201ENST00000604293 NISCHQ9Y2I1 1504 aa27.1■■□□□ 1.93
AC110048.1-201ENST00000604293 CCDC180Q9P1Z9 1646 aa23.71■■□□□ 1.39
AC110048.1-201ENST00000604293 ABCC9O60706 1549 aa23.06■■□□□ 1.28
AC110048.1-201ENST00000604293 ZCCHC6Q5VYS8 1495 aaKnown RBP22.8■■□□□ 1.24
AC110048.1-201ENST00000604293 DCAF8L2P0C7V8 631 aa22.7■■□□□ 1.22
AC110048.1-201ENST00000604293 DCAF1Q9Y4B6 1507 aa22.48■■□□□ 1.19
AC110048.1-201ENST00000604293 SHROOM4Q9ULL8 1493 aa22.27■■□□□ 1.15
AC110048.1-201ENST00000604293 HRCP23327 699 aa22.24■■□□□ 1.15
AC110048.1-201ENST00000604293 NACADO15069 1562 aa22.23■■□□□ 1.15
AC110048.1-201ENST00000604293 RB1CC1Q8TDY2 1594 aa22.19■■□□□ 1.14
AC110048.1-201ENST00000604293 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
AC110048.1-201ENST00000604293 SUPT5HO00267 1087 aaKnown RBP22.11■■□□□ 1.13
AC110048.1-201ENST00000604293 SCRIBQ14160 1630 aa21.87■■□□□ 1.09
AC110048.1-201ENST00000604293 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
AC110048.1-201ENST00000604293 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
AC110048.1-201ENST00000604293 PCGF6Q9BYE7 350 aa21.72■■□□□ 1.07
AC110048.1-201ENST00000604293 PABPN1Q86U42 306 aaKnown RBP eCLIP21.71■■□□□ 1.07
AC110048.1-201ENST00000604293 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
AC110048.1-201ENST00000604293 PPARGC1BQ86YN6 1023 aaKnown RBP21.57■■□□□ 1.04
AC110048.1-201ENST00000604293 TRIM26Q12899 539 aaPredicted RBP21.25■□□□□ 0.99
AC110048.1-201ENST00000604293 PELP1Q8IZL8 1130 aaKnown RBP21.23■□□□□ 0.99
AC110048.1-201ENST00000604293 LOC105371045A0A1W2PR82 267 aa21.17■□□□□ 0.98
AC110048.1-201ENST00000604293 CECR2Q9BXF3 1484 aa21.1■□□□□ 0.97
AC110048.1-201ENST00000604293 ZEB1P37275 1124 aaPredicted RBP21.09■□□□□ 0.97
AC110048.1-201ENST00000604293 RSF1Q96T23 1441 aaPredicted RBP21.09■□□□□ 0.97
AC110048.1-201ENST00000604293 EIF4G1Q04637 1599 aaKnown RBP20.96■□□□□ 0.95
AC110048.1-201ENST00000604293 MROH2BQ7Z745 1585 aa20.91■□□□□ 0.94
AC110048.1-201ENST00000604293 BAZ1AQ9NRL2 1556 aaPredicted RBP20.9■□□□□ 0.94
AC110048.1-201ENST00000604293 DNAJC5BQ9UF47 199 aa20.9■□□□□ 0.94
AC110048.1-201ENST00000604293 SMARCA4P51532 1647 aa20.86■□□□□ 0.93
AC110048.1-201ENST00000604293 SCAF1Q9H7N4 1312 aaKnown RBP20.83■□□□□ 0.93
AC110048.1-201ENST00000604293 CC2D2AQ9P2K1 1620 aa20.81■□□□□ 0.92
AC110048.1-201ENST00000604293 WIZO95785 1651 aa20.72■□□□□ 0.91
AC110048.1-201ENST00000604293 ATAD2BQ9ULI0 1458 aa20.66■□□□□ 0.9
AC110048.1-201ENST00000604293 TRIM41Q8WV44 630 aa20.59■□□□□ 0.89
AC110048.1-201ENST00000604293 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
AC110048.1-201ENST00000604293 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
AC110048.1-201ENST00000604293 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
AC110048.1-201ENST00000604293 NCAPD3P42695 1498 aa20.54■□□□□ 0.88
AC110048.1-201ENST00000604293 BAZ1BQ9UIG0 1483 aaKnown RBP20.52■□□□□ 0.88
AC110048.1-201ENST00000604293 ACIN1Q9UKV3 1341 aaKnown RBP20.44■□□□□ 0.86
AC110048.1-201ENST00000604293 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
AC110048.1-201ENST00000604293 MYT1Q01538 1121 aa20.39■□□□□ 0.85
AC110048.1-201ENST00000604293 FAM9AQ8IZU1 332 aaPredicted RBP20.37■□□□□ 0.85
AC110048.1-201ENST00000604293 CCDC88BA6NC98 1476 aa20.34■□□□□ 0.85
AC110048.1-201ENST00000604293 NEUROD1Q13562 356 aa20.32■□□□□ 0.84
AC110048.1-201ENST00000604293 CENPBP07199 599 aaPredicted RBP20.23■□□□□ 0.83
AC110048.1-201ENST00000604293 CCER1Q8TC90 406 aaPredicted RBP20.21■□□□□ 0.83
AC110048.1-201ENST00000604293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.21■□□□□ 0.83
AC110048.1-201ENST00000604293 GTF3C3Q9Y5Q9 886 aa20.18■□□□□ 0.82
AC110048.1-201ENST00000604293 DIEXFQ68CQ4 756 aaKnown RBP20.18■□□□□ 0.82
AC110048.1-201ENST00000604293 EHMT2Q96KQ7 1210 aa20.11■□□□□ 0.81
AC110048.1-201ENST00000604293 WRNQ14191 1432 aaPredicted RBP eCLIP20.09■□□□□ 0.81
AC110048.1-201ENST00000604293 NESP48681 1621 aa20.09■□□□□ 0.81
AC110048.1-201ENST00000604293 CADPSQ9ULU8 1353 aa20.01■□□□□ 0.79
AC110048.1-201ENST00000604293 CFTRP13569 1480 aa19.95■□□□□ 0.78
AC110048.1-201ENST00000604293 ABCC8Q09428 1581 aa19.92■□□□□ 0.78
AC110048.1-201ENST00000604293 LAMC3Q9Y6N6 1575 aa19.92■□□□□ 0.78
AC110048.1-201ENST00000604293 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.77
AC110048.1-201ENST00000604293 CEP162Q5TB80 1403 aa19.88■□□□□ 0.77
AC110048.1-201ENST00000604293 TNIKQ9UKE5 1360 aa19.82■□□□□ 0.76
AC110048.1-201ENST00000604293 PDS5BQ9NTI5 1447 aa19.81■□□□□ 0.76
AC110048.1-201ENST00000604293 KIF21AQ7Z4S6 1674 aa19.8■□□□□ 0.76
AC110048.1-201ENST00000604293 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
AC110048.1-201ENST00000604293 ERCC6Q03468 1493 aa19.79■□□□□ 0.76
AC110048.1-201ENST00000604293 PRDM2Q13029 1718 aa19.79■□□□□ 0.76
AC110048.1-201ENST00000604293 EEA1Q15075 1411 aa19.74■□□□□ 0.75
AC110048.1-201ENST00000604293 SYNJ1O43426 1573 aa19.71■□□□□ 0.75
AC110048.1-201ENST00000604293 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
AC110048.1-201ENST00000604293 TTBK1Q5TCY1 1321 aaPredicted RBP19.66■□□□□ 0.74
AC110048.1-201ENST00000604293 TOP2BQ02880 1626 aa19.65■□□□□ 0.74
AC110048.1-201ENST00000604293 SOGA1O94964 1423 aa19.65■□□□□ 0.74
AC110048.1-201ENST00000604293 MIER1Q8N108 512 aa19.65■□□□□ 0.74
AC110048.1-201ENST00000604293 YTHDC1Q96MU7 727 aaKnown RBP19.65■□□□□ 0.74
AC110048.1-201ENST00000604293 BIVM-ERCC5R4GMW8 1640 aa19.64■□□□□ 0.73
AC110048.1-201ENST00000604293 GOLGA3Q08378 1498 aa19.61■□□□□ 0.73
AC110048.1-201ENST00000604293 URB2Q14146 1524 aaKnown RBP19.59■□□□□ 0.73
AC110048.1-201ENST00000604293 CSRNP3Q8WYN3 585 aa19.58■□□□□ 0.72
AC110048.1-201ENST00000604293 MRC2Q9UBG0 1479 aa19.57■□□□□ 0.72
AC110048.1-201ENST00000604293 THOC2Q8NI27 1593 aaKnown RBP19.56■□□□□ 0.72
AC110048.1-201ENST00000604293 CUX1P39880 1505 aa19.55■□□□□ 0.72
AC110048.1-201ENST00000604293 CLSPNQ9HAW4 1339 aa19.55■□□□□ 0.72
AC110048.1-201ENST00000604293 RUSC2Q8N2Y8 1516 aa19.52■□□□□ 0.72
AC110048.1-201ENST00000604293 TOPBP1Q92547 1522 aa19.52■□□□□ 0.72
AC110048.1-201ENST00000604293 UBTFP17480 764 aaKnown RBP19.5■□□□□ 0.71
AC110048.1-201ENST00000604293 DNMBPQ6XZF7 1577 aa19.49■□□□□ 0.71
AC110048.1-201ENST00000604293 WDR62O43379 1518 aa19.48■□□□□ 0.71
AC110048.1-201ENST00000604293 KIF21BO75037 1637 aa19.46■□□□□ 0.71
AC110048.1-201ENST00000604293 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
AC110048.1-201ENST00000604293 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
AC110048.1-201ENST00000604293 VPS8Q8N3P4 1428 aa19.4■□□□□ 0.7
AC110048.1-201ENST00000604293 POLA1P09884 1462 aaPredicted RBP19.39■□□□□ 0.69
AC110048.1-201ENST00000604293 RAD54L2Q9Y4B4 1467 aa19.39■□□□□ 0.69
AC110048.1-201ENST00000604293 CLIP1P30622 1438 aa19.37■□□□□ 0.69
AC110048.1-201ENST00000604293 CUX2O14529 1486 aa19.36■□□□□ 0.69
AC110048.1-201ENST00000604293 SUPT16HQ9Y5B9 1047 aaKnown RBP19.33■□□□□ 0.69
AC110048.1-201ENST00000604293 KIF27Q86VH2 1401 aa19.32■□□□□ 0.68
AC110048.1-201ENST00000604293 PRXQ9BXM0 1461 aa19.27■□□□□ 0.67
AC110048.1-201ENST00000604293 TDRD9Q8NDG6 1382 aaKnown RBP19.26■□□□□ 0.67
AC110048.1-201ENST00000604293 TARBP1Q13395 1621 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms