RNA–Protein interactions for RNA: ENST00000603717.1

AC008555.3-201, humanhuman

TSL 3 BASIC

Gene AC008555.3, Length 442 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008555.3-201ENST00000603717 AEBP2Q6ZN18 517 aaPredicted RBP30.17■■■□□ 2.42
AC008555.3-201ENST00000603717 CHIC1Q5VXU3 224 aa27.97■■■□□ 2.07
AC008555.3-201ENST00000603717 SENP3Q9H4L4 574 aaPredicted RBP25.76■■□□□ 1.71
AC008555.3-201ENST00000603717 PHF23Q9BUL5 403 aaPredicted RBP25.3■■□□□ 1.64
AC008555.3-201ENST00000603717 POTEDQ86YR6 584 aa24.66■■□□□ 1.54
AC008555.3-201ENST00000603717 FOXD1Q16676 465 aa24.25■■□□□ 1.47
AC008555.3-201ENST00000603717 MSH5O43196 834 aa23.05■■□□□ 1.28
AC008555.3-201ENST00000603717 PIAS4Q8N2W9 510 aaPredicted RBP22.28■■□□□ 1.16
AC008555.3-201ENST00000603717 PPP6R1Q9UPN7 881 aa21.79■■□□□ 1.08
AC008555.3-201ENST00000603717 ADRA2BP18089 450 aa21.58■■□□□ 1.05
AC008555.3-201ENST00000603717 PLPPR3Q6T4P5 718 aa21.25■□□□□ 0.99
AC008555.3-201ENST00000603717 CACNB1Q02641 598 aaPredicted RBP20.51■□□□□ 0.87
AC008555.3-201ENST00000603717 DMRT2Q9Y5R5 561 aa20.3■□□□□ 0.84
AC008555.3-201ENST00000603717 MAPK8IP2Q13387 824 aaPredicted RBP20.23■□□□□ 0.83
AC008555.3-201ENST00000603717 RNF39Q9H2S5 420 aa19.64■□□□□ 0.73
AC008555.3-201ENST00000603717 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
AC008555.3-201ENST00000603717 DCAF8L1A6NGE4 600 aa19.39■□□□□ 0.69
AC008555.3-201ENST00000603717 C1QBPQ07021 282 aaKnown RBP19.21■□□□□ 0.67
AC008555.3-201ENST00000603717 HOXD11P31277 338 aaPredicted RBP19.09■□□□□ 0.65
AC008555.3-201ENST00000603717 POTEHQ6S545 545 aa19.04■□□□□ 0.64
AC008555.3-201ENST00000603717 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
AC008555.3-201ENST00000603717 RNF216Q9NWF9 866 aaPredicted RBP18.57■□□□□ 0.56
AC008555.3-201ENST00000603717 PPP4R3CPQ6ZMV5 832 aa18.5■□□□□ 0.55
AC008555.3-201ENST00000603717 CNKSR2Q8WXI2 1034 aa18.41■□□□□ 0.54
AC008555.3-201ENST00000603717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.06■□□□□ 0.48
AC008555.3-201ENST00000603717 DSG3P32926 999 aa17.98■□□□□ 0.47
AC008555.3-201ENST00000603717 SPINK5Q9NQ38 1064 aaPredicted RBP17.78■□□□□ 0.44
AC008555.3-201ENST00000603717 CAPN15O75808 1086 aa17.69■□□□□ 0.42
AC008555.3-201ENST00000603717 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
AC008555.3-201ENST00000603717 NCBP3Q53F19 620 aaKnown RBP17.31■□□□□ 0.36
AC008555.3-201ENST00000603717 SP7Q8TDD2 431 aaPredicted RBP17.28■□□□□ 0.36
AC008555.3-201ENST00000603717 CHRDL2Q6WN34 429 aa17.25■□□□□ 0.35
AC008555.3-201ENST00000603717 ABCB7O75027 752 aa17.24■□□□□ 0.35
AC008555.3-201ENST00000603717 NPM3O75607 178 aaKnown RBP17.21■□□□□ 0.35
AC008555.3-201ENST00000603717 TRHP20396 242 aaPredicted RBP17.13■□□□□ 0.33
AC008555.3-201ENST00000603717 RBM42Q9BTD8 480 aaKnown RBP17.06■□□□□ 0.32
AC008555.3-201ENST00000603717 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
AC008555.3-201ENST00000603717 APLP2Q06481 763 aa16.84■□□□□ 0.29
AC008555.3-201ENST00000603717 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
AC008555.3-201ENST00000603717 PIP4P2Q8N4L2 257 aa16.61■□□□□ 0.25
AC008555.3-201ENST00000603717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.58■□□□□ 0.24
AC008555.3-201ENST00000603717 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.24
AC008555.3-201ENST00000603717 HAX1O00165 279 aa16.55■□□□□ 0.24
AC008555.3-201ENST00000603717 SAMD1Q6SPF0 538 aaPredicted RBP16.47■□□□□ 0.23
AC008555.3-201ENST00000603717 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
AC008555.3-201ENST00000603717 EVX2Q03828 476 aa16.42■□□□□ 0.22
AC008555.3-201ENST00000603717 POLA2Q14181 598 aa16.42■□□□□ 0.22
AC008555.3-201ENST00000603717 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
AC008555.3-201ENST00000603717 FXR2P51116 673 aaKnown RBP eCLIP16.33■□□□□ 0.2
AC008555.3-201ENST00000603717 PITPNM1O00562 1244 aa16.21■□□□□ 0.19
AC008555.3-201ENST00000603717 LHX8Q68G74 356 aa16.17■□□□□ 0.18
AC008555.3-201ENST00000603717 PLSCR2Q9NRY7 297 aa16.11■□□□□ 0.17
AC008555.3-201ENST00000603717 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
AC008555.3-201ENST00000603717 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
AC008555.3-201ENST00000603717 GABBR2O75899 941 aa15.89■□□□□ 0.13
AC008555.3-201ENST00000603717 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
AC008555.3-201ENST00000603717 C19orf67A6NJJ6 358 aa15.84■□□□□ 0.13
AC008555.3-201ENST00000603717 KCNA4P22459 653 aa15.82■□□□□ 0.12
AC008555.3-201ENST00000603717 ATF5Q9Y2D1 282 aaPredicted RBP15.74■□□□□ 0.11
AC008555.3-201ENST00000603717 PRKAR2AP13861 404 aaKnown RBP15.73■□□□□ 0.11
AC008555.3-201ENST00000603717 POTEIP0CG38 1075 aa15.64■□□□□ 0.09
AC008555.3-201ENST00000603717 CLEC11AQ9Y240 323 aa15.41■□□□□ 0.06
AC008555.3-201ENST00000603717 SPDYE2BA6NHP3 402 aa15.38■□□□□ 0.05
AC008555.3-201ENST00000603717 SPDYE6P0CI01 402 aa15.38■□□□□ 0.05
AC008555.3-201ENST00000603717 SPDYE2Q495Y8 402 aa15.38■□□□□ 0.05
AC008555.3-201ENST00000603717 SPDYE1Q8NFV5 336 aaPredicted RBP15.38■□□□□ 0.05
AC008555.3-201ENST00000603717 CHADLQ6NUI6 762 aa15.34■□□□□ 0.05
AC008555.3-201ENST00000603717 POTEMA6NI47 508 aa15.29■□□□□ 0.04
AC008555.3-201ENST00000603717 OTUD5Q96G74 571 aa15.24■□□□□ 0.03
AC008555.3-201ENST00000603717 POTEGQ6S5H5 508 aa15.21■□□□□ 0.03
AC008555.3-201ENST00000603717 CD44P16070 742 aaKnown RBP15.16■□□□□ 0.02
AC008555.3-201ENST00000603717 SSUH2Q9Y2M2 353 aa15.13■□□□□ 0.01
AC008555.3-201ENST00000603717 CLCN6P51797 869 aa15.11■□□□□ 0.01
AC008555.3-201ENST00000603717 POTEB2H3BUK9 544 aa15.1■□□□□ 0.01
AC008555.3-201ENST00000603717 DCBLD2Q96PD2 775 aa15.1■□□□□ 0.01
AC008555.3-201ENST00000603717 FOXD4L1Q9NU39 408 aa15.07■□□□□ 0
AC008555.3-201ENST00000603717 PCDH10Q9P2E7 1040 aa15.04■□□□□ -0
AC008555.3-201ENST00000603717 FBLN2P98095 1184 aa15□□□□□ -0.01
AC008555.3-201ENST00000603717 PRR29P0C7W0 189 aa14.98□□□□□ -0.01
AC008555.3-201ENST00000603717 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
AC008555.3-201ENST00000603717 FARP1Q9Y4F1 1045 aaPredicted RBP14.95□□□□□ -0.02
AC008555.3-201ENST00000603717 MKRN4PQ13434 485 aaPredicted RBP14.94□□□□□ -0.02
AC008555.3-201ENST00000603717 ZNF579Q8NAF0 562 aaKnown RBP14.91□□□□□ -0.02
AC008555.3-201ENST00000603717 LCE2DQ5TA82 110 aaPredicted RBP14.84□□□□□ -0.03
AC008555.3-201ENST00000603717 GALR2O43603 387 aaPredicted RBP14.83□□□□□ -0.04
AC008555.3-201ENST00000603717 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
AC008555.3-201ENST00000603717 ZRANB1Q9UGI0 708 aa14.74□□□□□ -0.05
AC008555.3-201ENST00000603717 ATXN8OSP0DMR3 200 aa14.71□□□□□ -0.05
AC008555.3-201ENST00000603717 POTEJP0CG39 1038 aa14.7□□□□□ -0.06
AC008555.3-201ENST00000603717 PELP1Q8IZL8 1130 aaKnown RBP14.7□□□□□ -0.06
AC008555.3-201ENST00000603717 ZBTB22O15209 634 aa14.6□□□□□ -0.07
AC008555.3-201ENST00000603717 SLC4A1APQ9BWU0 796 aaKnown RBP14.6□□□□□ -0.07
AC008555.3-201ENST00000603717 FAM163AQ96GL9 167 aaPredicted RBP14.55□□□□□ -0.08
AC008555.3-201ENST00000603717 METRNQ9UJH8 293 aa14.51□□□□□ -0.09
AC008555.3-201ENST00000603717 PHF12Q96QT6 1004 aa14.49□□□□□ -0.09
AC008555.3-201ENST00000603717 MAMSTRQ6ZN01 415 aa14.46□□□□□ -0.09
AC008555.3-201ENST00000603717 CREBZFQ9NS37 354 aa14.44□□□□□ -0.1
AC008555.3-201ENST00000603717 ASTLQ6HA08 431 aaPredicted RBP14.43□□□□□ -0.1
AC008555.3-201ENST00000603717 C7P10643 843 aa14.4□□□□□ -0.1
AC008555.3-201ENST00000603717 CDAN1Q8IWY9 1227 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms