RNA–Protein interactions for RNA: ENST00000600816.1

TMEM143-211, Transcript of transmembrane protein 143, humanhuman

TSL 2

Gene TMEM143, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-211ENST00000600816 NISCHQ9Y2I1 1504 aa39.76■■■■□ 3.96
TMEM143-211ENST00000600816 CCDC180Q9P1Z9 1646 aa35.33■■■■□ 3.25
TMEM143-211ENST00000600816 ABCC9O60706 1549 aa35.03■■■■□ 3.2
TMEM143-211ENST00000600816 DCAF8L2P0C7V8 631 aa33.46■■■□□ 2.95
TMEM143-211ENST00000600816 RB1CC1Q8TDY2 1594 aa33.44■■■□□ 2.94
TMEM143-211ENST00000600816 NACADO15069 1562 aa33.34■■■□□ 2.93
TMEM143-211ENST00000600816 ZCCHC6Q5VYS8 1495 aaKnown RBP33.07■■■□□ 2.88
TMEM143-211ENST00000600816 MYO15BQ96JP2 1530 aa33.03■■■□□ 2.88
TMEM143-211ENST00000600816 DCAF1Q9Y4B6 1507 aa32.82■■■□□ 2.84
TMEM143-211ENST00000600816 PABPN1Q86U42 306 aaKnown RBP eCLIP32.77■■■□□ 2.84
TMEM143-211ENST00000600816 UNC13AQ9UPW8 1703 aa32.63■■■□□ 2.81
TMEM143-211ENST00000600816 BICRAQ9NZM4 1560 aa32.51■■■□□ 2.79
TMEM143-211ENST00000600816 DNAJC5BQ9UF47 199 aa32.48■■■□□ 2.79
TMEM143-211ENST00000600816 SCRIBQ14160 1630 aa32.37■■■□□ 2.77
TMEM143-211ENST00000600816 SHROOM4Q9ULL8 1493 aa32.03■■■□□ 2.72
TMEM143-211ENST00000600816 EIF4G1Q04637 1599 aaKnown RBP31.66■■■□□ 2.66
TMEM143-211ENST00000600816 CC2D2AQ9P2K1 1620 aa31.6■■■□□ 2.65
TMEM143-211ENST00000600816 CECR2Q9BXF3 1484 aa31.46■■■□□ 2.63
TMEM143-211ENST00000600816 SMARCA4P51532 1647 aa30.88■■■□□ 2.53
TMEM143-211ENST00000600816 NCAPD3P42695 1498 aa30.83■■■□□ 2.53
TMEM143-211ENST00000600816 ATAD2BQ9ULI0 1458 aa30.83■■■□□ 2.53
TMEM143-211ENST00000600816 BAZ1AQ9NRL2 1556 aaPredicted RBP30.79■■■□□ 2.52
TMEM143-211ENST00000600816 SMARCA2P51531 1590 aa30.71■■■□□ 2.51
TMEM143-211ENST00000600816 MROH2BQ7Z745 1585 aa30.7■■■□□ 2.5
TMEM143-211ENST00000600816 HMGXB3Q12766 1538 aa30.6■■■□□ 2.49
TMEM143-211ENST00000600816 PEG3Q9GZU2 1588 aa30.55■■■□□ 2.48
TMEM143-211ENST00000600816 BAZ1BQ9UIG0 1483 aaKnown RBP30.55■■■□□ 2.48
TMEM143-211ENST00000600816 WIZO95785 1651 aa30.3■■■□□ 2.44
TMEM143-211ENST00000600816 RSF1Q96T23 1441 aaPredicted RBP30.26■■■□□ 2.43
TMEM143-211ENST00000600816 NESP48681 1621 aa30.25■■■□□ 2.43
TMEM143-211ENST00000600816 ERCC6Q03468 1493 aa30.17■■■□□ 2.42
TMEM143-211ENST00000600816 LAMC3Q9Y6N6 1575 aa30■■■□□ 2.39
TMEM143-211ENST00000600816 TOP2AP11388 1531 aaKnown RBP29.95■■■□□ 2.38
TMEM143-211ENST00000600816 CADPSQ9ULU8 1353 aa29.94■■■□□ 2.38
TMEM143-211ENST00000600816 CUX2O14529 1486 aa29.88■■■□□ 2.37
TMEM143-211ENST00000600816 PDS5BQ9NTI5 1447 aa29.86■■■□□ 2.37
TMEM143-211ENST00000600816 KIF21AQ7Z4S6 1674 aa29.76■■■□□ 2.35
TMEM143-211ENST00000600816 THOC2Q8NI27 1593 aaKnown RBP29.74■■■□□ 2.35
TMEM143-211ENST00000600816 CFTRP13569 1480 aa29.69■■■□□ 2.34
TMEM143-211ENST00000600816 CCDC88BA6NC98 1476 aa29.66■■■□□ 2.34
TMEM143-211ENST00000600816 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
TMEM143-211ENST00000600816 MRC2Q9UBG0 1479 aa29.58■■■□□ 2.33
TMEM143-211ENST00000600816 CEP164Q9UPV0 1460 aa29.56■■■□□ 2.32
TMEM143-211ENST00000600816 WDR62O43379 1518 aa29.47■■■□□ 2.31
TMEM143-211ENST00000600816 DNAJC5Q9H3Z4 198 aa29.37■■■□□ 2.29
TMEM143-211ENST00000600816 SUPT5HO00267 1087 aaKnown RBP29.36■■■□□ 2.29
TMEM143-211ENST00000600816 URB2Q14146 1524 aaKnown RBP29.35■■■□□ 2.29
TMEM143-211ENST00000600816 PRDM2Q13029 1718 aa29.25■■■□□ 2.27
TMEM143-211ENST00000600816 TOPBP1Q92547 1522 aa29.09■■■□□ 2.25
TMEM143-211ENST00000600816 ABCC8Q09428 1581 aa28.99■■■□□ 2.23
TMEM143-211ENST00000600816 DNMBPQ6XZF7 1577 aa28.99■■■□□ 2.23
TMEM143-211ENST00000600816 IFT140Q96RY7 1462 aa28.95■■■□□ 2.22
TMEM143-211ENST00000600816 ZNF608Q9ULD9 1512 aaPredicted RBP28.92■■■□□ 2.22
TMEM143-211ENST00000600816 POLA1P09884 1462 aaPredicted RBP28.83■■■□□ 2.21
TMEM143-211ENST00000600816 CUX1P39880 1505 aa28.8■■■□□ 2.2
TMEM143-211ENST00000600816 RAD54L2Q9Y4B4 1467 aa28.77■■■□□ 2.2
TMEM143-211ENST00000600816 TARBP1Q13395 1621 aaKnown RBP28.76■■■□□ 2.19
TMEM143-211ENST00000600816 FGD5Q6ZNL6 1462 aa28.73■■■□□ 2.19
TMEM143-211ENST00000600816 SOGA1O94964 1423 aa28.73■■■□□ 2.19
TMEM143-211ENST00000600816 AQRO60306 1485 aaKnown RBP eCLIP28.72■■■□□ 2.198e-7■■■□□ 16.1
TMEM143-211ENST00000600816 EIF4G3O43432 1585 aaKnown RBP28.7■■■□□ 2.18
TMEM143-211ENST00000600816 OSCARQ8IYS5 282 aa28.67■■■□□ 2.18
TMEM143-211ENST00000600816 TDRD9Q8NDG6 1382 aaKnown RBP28.65■■■□□ 2.18
TMEM143-211ENST00000600816 WRNQ14191 1432 aaPredicted RBP eCLIP28.51■■■□□ 2.15
TMEM143-211ENST00000600816 FBLN2P98095 1184 aa28.45■■■□□ 2.14
TMEM143-211ENST00000600816 SYNJ1O43426 1573 aa28.45■■■□□ 2.14
TMEM143-211ENST00000600816 SNAPC4Q5SXM2 1469 aa28.42■■■□□ 2.14
TMEM143-211ENST00000600816 WDR97A6NE52 1622 aa28.41■■■□□ 2.14
TMEM143-211ENST00000600816 TOP2BQ02880 1626 aa28.41■■■□□ 2.14
TMEM143-211ENST00000600816 ABCA10Q8WWZ4 1543 aa28.41■■■□□ 2.14
TMEM143-211ENST00000600816 GRIN2BQ13224 1484 aa28.39■■■□□ 2.13
TMEM143-211ENST00000600816 BIVM-ERCC5R4GMW8 1640 aa28.38■■■□□ 2.13
TMEM143-211ENST00000600816 GAPVD1Q14C86 1478 aa28.37■■■□□ 2.13
TMEM143-211ENST00000600816 TRIM41Q8WV44 630 aa28.35■■■□□ 2.13
TMEM143-211ENST00000600816 CHD1O14646 1710 aa28.35■■■□□ 2.13
TMEM143-211ENST00000600816 MAGI1Q96QZ7 1491 aaPredicted RBP28.31■■■□□ 2.12
TMEM143-211ENST00000600816 CHMP7Q8WUX9 453 aaPredicted RBP28.29■■■□□ 2.12
TMEM143-211ENST00000600816 ABCA5Q8WWZ7 1642 aa28.29■■■□□ 2.12
TMEM143-211ENST00000600816 SYNJ2O15056 1496 aa28.23■■■□□ 2.11
TMEM143-211ENST00000600816 PBRM1Q86U86 1689 aa28.23■■■□□ 2.11
TMEM143-211ENST00000600816 RIMBP3CA6NJZ7 1639 aa28.2■■■□□ 2.1
TMEM143-211ENST00000600816 RIMBP3BA6NNM3 1639 aa28.2■■■□□ 2.1
TMEM143-211ENST00000600816 RIMBP3Q9UFD9 1639 aa28.2■■■□□ 2.1
TMEM143-211ENST00000600816 ARHGEF11O15085 1522 aa28.19■■■□□ 2.1
TMEM143-211ENST00000600816 CLASP1Q7Z460 1538 aa28.1■■■□□ 2.09
TMEM143-211ENST00000600816 ADAMTS12P58397 1594 aa28.06■■■□□ 2.08
TMEM143-211ENST00000600816 ERICH3Q5RHP9 1530 aa28.03■■■□□ 2.08
TMEM143-211ENST00000600816 GRIN2AQ12879 1464 aa28.03■■■□□ 2.08
TMEM143-211ENST00000600816 FHAD1B1AJZ9 1412 aa28.02■■■□□ 2.08
TMEM143-211ENST00000600816 CYB5RLQ6IPT4 315 aa28.02■■■□□ 2.08
TMEM143-211ENST00000600816 ARAP1Q96P48 1450 aa27.98■■■□□ 2.07
TMEM143-211ENST00000600816 NUP160Q12769 1436 aa27.92■■■□□ 2.06
TMEM143-211ENST00000600816 KIF27Q86VH2 1401 aa27.92■■■□□ 2.06
TMEM143-211ENST00000600816 CEP170Q5SW79 1584 aa27.91■■■□□ 2.06
TMEM143-211ENST00000600816 IGF1RP08069 1367 aa27.89■■■□□ 2.06
TMEM143-211ENST00000600816 ERCC6L2Q5T890 1561 aa27.76■■■□□ 2.03
TMEM143-211ENST00000600816 CARMIL1Q5VZK9 1371 aa27.7■■■□□ 2.02
TMEM143-211ENST00000600816 RUSC2Q8N2Y8 1516 aa27.68■■■□□ 2.02
TMEM143-211ENST00000600816 JPH4Q96JJ6 628 aa27.68■■■□□ 2.02
TMEM143-211ENST00000600816 CUL7Q14999 1698 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms