RNA–Protein interactions for RNA: ENST00000600194.5

PRKD2-214, Transcript of protein kinase D2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKD2, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-214ENST00000600194 NISCHQ9Y2I1 1504 aa32.69■■■□□ 2.82
PRKD2-214ENST00000600194 SHROOM4Q9ULL8 1493 aa28.59■■■□□ 2.17
PRKD2-214ENST00000600194 CCDC180Q9P1Z9 1646 aa28.31■■■□□ 2.12
PRKD2-214ENST00000600194 SUPT5HO00267 1087 aaKnown RBP28.06■■■□□ 2.08
PRKD2-214ENST00000600194 DCAF8L2P0C7V8 631 aa27.98■■■□□ 2.07
PRKD2-214ENST00000600194 ZCCHC6Q5VYS8 1495 aaKnown RBP27.58■■■□□ 2.01
PRKD2-214ENST00000600194 ABCC9O60706 1549 aa27.31■■□□□ 1.96
PRKD2-214ENST00000600194 CHIC1Q5VXU3 224 aa26.96■■□□□ 1.91
PRKD2-214ENST00000600194 MYO15BQ96JP2 1530 aa26.83■■□□□ 1.89
PRKD2-214ENST00000600194 DCAF1Q9Y4B6 1507 aa26.76■■□□□ 1.87
PRKD2-214ENST00000600194 NACADO15069 1562 aa26.48■■□□□ 1.83
PRKD2-214ENST00000600194 LOC105371045A0A1W2PR82 267 aa26.45■■□□□ 1.82
PRKD2-214ENST00000600194 PCGF6Q9BYE7 350 aa26.42■■□□□ 1.82
PRKD2-214ENST00000600194 RB1CC1Q8TDY2 1594 aa26.33■■□□□ 1.81
PRKD2-214ENST00000600194 SCRIBQ14160 1630 aa26.32■■□□□ 1.8
PRKD2-214ENST00000600194 HRCP23327 699 aa26.12■■□□□ 1.77
PRKD2-214ENST00000600194 EHMT2Q96KQ7 1210 aa26.1■■□□□ 1.77
PRKD2-214ENST00000600194 FAM9AQ8IZU1 332 aaPredicted RBP26.05■■□□□ 1.76
PRKD2-214ENST00000600194 RSF1Q96T23 1441 aaPredicted RBP26.01■■□□□ 1.75
PRKD2-214ENST00000600194 PPARGC1BQ86YN6 1023 aaKnown RBP25.96■■□□□ 1.75
PRKD2-214ENST00000600194 TRIM41Q8WV44 630 aa25.93■■□□□ 1.74
PRKD2-214ENST00000600194 PABPN1Q86U42 306 aaKnown RBP eCLIP25.85■■□□□ 1.73
PRKD2-214ENST00000600194 UNC13AQ9UPW8 1703 aa25.81■■□□□ 1.72
PRKD2-214ENST00000600194 CECR2Q9BXF3 1484 aa25.75■■□□□ 1.71
PRKD2-214ENST00000600194 PELP1Q8IZL8 1130 aaKnown RBP25.62■■□□□ 1.69
PRKD2-214ENST00000600194 TRIM26Q12899 539 aaPredicted RBP25.6■■□□□ 1.69
PRKD2-214ENST00000600194 BICRAQ9NZM4 1560 aa25.58■■□□□ 1.69
PRKD2-214ENST00000600194 MROH2BQ7Z745 1585 aa25.56■■□□□ 1.68
PRKD2-214ENST00000600194 WIZO95785 1651 aa25.42■■□□□ 1.66
PRKD2-214ENST00000600194 MYT1Q01538 1121 aa25.2■■□□□ 1.63
PRKD2-214ENST00000600194 TTBK1Q5TCY1 1321 aaPredicted RBP25.2■■□□□ 1.62
PRKD2-214ENST00000600194 BAZ1AQ9NRL2 1556 aaPredicted RBP25.16■■□□□ 1.62
PRKD2-214ENST00000600194 SMARCA4P51532 1647 aa25.08■■□□□ 1.61
PRKD2-214ENST00000600194 ABCC8Q09428 1581 aa25■■□□□ 1.59
PRKD2-214ENST00000600194 CCDC88BA6NC98 1476 aa24.92■■□□□ 1.58
PRKD2-214ENST00000600194 ZEB1P37275 1124 aaPredicted RBP24.9■■□□□ 1.58
PRKD2-214ENST00000600194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.89■■□□□ 1.57
PRKD2-214ENST00000600194 EIF4G1Q04637 1599 aaKnown RBP24.86■■□□□ 1.57
PRKD2-214ENST00000600194 TOP2AP11388 1531 aaKnown RBP24.83■■□□□ 1.57
PRKD2-214ENST00000600194 UBTFP17480 764 aaKnown RBP24.81■■□□□ 1.56
PRKD2-214ENST00000600194 SOGA1O94964 1423 aa24.8■■□□□ 1.56
PRKD2-214ENST00000600194 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
PRKD2-214ENST00000600194 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
PRKD2-214ENST00000600194 CCER1Q8TC90 406 aaPredicted RBP24.75■■□□□ 1.55
PRKD2-214ENST00000600194 RUSC2Q8N2Y8 1516 aa24.69■■□□□ 1.54
PRKD2-214ENST00000600194 RANGAP1P46060 587 aaPredicted RBP24.67■■□□□ 1.54
PRKD2-214ENST00000600194 CSRNP3Q8WYN3 585 aa24.65■■□□□ 1.54
PRKD2-214ENST00000600194 PEG3Q9GZU2 1588 aa24.65■■□□□ 1.54
PRKD2-214ENST00000600194 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.54
PRKD2-214ENST00000600194 PRKCSHP14314 528 aaPredicted RBP24.62■■□□□ 1.53
PRKD2-214ENST00000600194 CEP162Q5TB80 1403 aa24.61■■□□□ 1.53
PRKD2-214ENST00000600194 SCAF1Q9H7N4 1312 aaKnown RBP24.6■■□□□ 1.53
PRKD2-214ENST00000600194 CC2D2AQ9P2K1 1620 aa24.56■■□□□ 1.52
PRKD2-214ENST00000600194 NCAPD3P42695 1498 aa24.5■■□□□ 1.51
PRKD2-214ENST00000600194 WRNQ14191 1432 aaPredicted RBP eCLIP24.47■■□□□ 1.51
PRKD2-214ENST00000600194 TNIKQ9UKE5 1360 aa24.44■■□□□ 1.5
PRKD2-214ENST00000600194 HMGXB3Q12766 1538 aa24.39■■□□□ 1.49
PRKD2-214ENST00000600194 HNRNPUL2Q1KMD3 747 aaKnown RBP24.35■■□□□ 1.49
PRKD2-214ENST00000600194 GOLGA3Q08378 1498 aa24.31■■□□□ 1.48
PRKD2-214ENST00000600194 DNAJC5BQ9UF47 199 aa24.3■■□□□ 1.48
PRKD2-214ENST00000600194 EEA1Q15075 1411 aa24.29■■□□□ 1.48
PRKD2-214ENST00000600194 SYNJ1O43426 1573 aa24.28■■□□□ 1.48
PRKD2-214ENST00000600194 APLP2Q06481 763 aa24.19■■□□□ 1.46
PRKD2-214ENST00000600194 DIEXFQ68CQ4 756 aaKnown RBP24.17■■□□□ 1.46
PRKD2-214ENST00000600194 CLIP1P30622 1438 aa24.17■■□□□ 1.46
PRKD2-214ENST00000600194 CEP164Q9UPV0 1460 aa24.14■■□□□ 1.46
PRKD2-214ENST00000600194 RAPGEF2Q9Y4G8 1499 aa24.13■■□□□ 1.45
PRKD2-214ENST00000600194 SLC24A1O60721 1099 aa24.06■■□□□ 1.44
PRKD2-214ENST00000600194 NEUROD1Q13562 356 aa23.99■■□□□ 1.43
PRKD2-214ENST00000600194 CFTRP13569 1480 aa23.95■■□□□ 1.42
PRKD2-214ENST00000600194 CADPSQ9ULU8 1353 aa23.95■■□□□ 1.42
PRKD2-214ENST00000600194 VPS8Q8N3P4 1428 aa23.94■■□□□ 1.42
PRKD2-214ENST00000600194 KIF21BO75037 1637 aa23.93■■□□□ 1.42
PRKD2-214ENST00000600194 YTHDC1Q96MU7 727 aaKnown RBP23.93■■□□□ 1.42
PRKD2-214ENST00000600194 ACIN1Q9UKV3 1341 aaKnown RBP23.92■■□□□ 1.42
PRKD2-214ENST00000600194 NESP48681 1621 aa23.92■■□□□ 1.42
PRKD2-214ENST00000600194 ZNF316A6NFI3 1004 aaPredicted RBP23.9■■□□□ 1.42
PRKD2-214ENST00000600194 KANK4Q5T7N3 995 aaPredicted RBP23.84■■□□□ 1.41
PRKD2-214ENST00000600194 TOP2BQ02880 1626 aa23.83■■□□□ 1.41
PRKD2-214ENST00000600194 ITGAEP38570 1179 aa23.83■■□□□ 1.41
PRKD2-214ENST00000600194 GTF3C3Q9Y5Q9 886 aa23.77■■□□□ 1.4
PRKD2-214ENST00000600194 CENPBP07199 599 aaPredicted RBP23.76■■□□□ 1.39
PRKD2-214ENST00000600194 CUX1P39880 1505 aa23.75■■□□□ 1.39
PRKD2-214ENST00000600194 FANCD2Q9BXW9 1451 aa23.71■■□□□ 1.39
PRKD2-214ENST00000600194 MIER1Q8N108 512 aa23.7■■□□□ 1.38
PRKD2-214ENST00000600194 KIF27Q86VH2 1401 aa23.69■■□□□ 1.38
PRKD2-214ENST00000600194 BCL11AQ9H165 835 aa23.68■■□□□ 1.38
PRKD2-214ENST00000600194 PRXQ9BXM0 1461 aa23.68■■□□□ 1.38
PRKD2-214ENST00000600194 ARAP1Q96P48 1450 aa23.66■■□□□ 1.38
PRKD2-214ENST00000600194 LAMC3Q9Y6N6 1575 aa23.66■■□□□ 1.38
PRKD2-214ENST00000600194 ATP1B4Q9UN42 357 aaPredicted RBP23.66■■□□□ 1.38
PRKD2-214ENST00000600194 ERICH6Q7L0X2 663 aa23.65■■□□□ 1.38
PRKD2-214ENST00000600194 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
PRKD2-214ENST00000600194 PRDM2Q13029 1718 aa23.65■■□□□ 1.38
PRKD2-214ENST00000600194 P3H3Q8IVL6 736 aa23.64■■□□□ 1.37
PRKD2-214ENST00000600194 PDS5BQ9NTI5 1447 aa23.58■■□□□ 1.36
PRKD2-214ENST00000600194 CUX2O14529 1486 aa23.57■■□□□ 1.36
PRKD2-214ENST00000600194 ERICH3Q5RHP9 1530 aa23.54■■□□□ 1.36
PRKD2-214ENST00000600194 KIF21AQ7Z4S6 1674 aa23.48■■□□□ 1.35
PRKD2-214ENST00000600194 DHX57Q6P158 1386 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms