RNA–Protein interactions for RNA: ENST00000600178.5

ECH1-212, Transcript of enoyl-CoA hydratase 1, humanhuman

TSL 2

Gene ECH1, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1-212ENST00000600178 NISCHQ9Y2I1 1504 aa44.64■■■■■ 4.74
ECH1-212ENST00000600178 ABCC9O60706 1549 aa40.42■■■■■ 4.06
ECH1-212ENST00000600178 CCDC180Q9P1Z9 1646 aa40.2■■■■■ 4.03
ECH1-212ENST00000600178 RB1CC1Q8TDY2 1594 aa38.37■■■■□ 3.73
ECH1-212ENST00000600178 DNAJC5BQ9UF47 199 aa38.16■■■■□ 3.7
ECH1-212ENST00000600178 NACADO15069 1562 aa38.04■■■■□ 3.68
ECH1-212ENST00000600178 DCAF8L2P0C7V8 631 aa37.74■■■■□ 3.63
ECH1-212ENST00000600178 PABPN1Q86U42 306 aaKnown RBP eCLIP37.57■■■■□ 3.6
ECH1-212ENST00000600178 UNC13AQ9UPW8 1703 aa37.54■■■■□ 3.6
ECH1-212ENST00000600178 MYO15BQ96JP2 1530 aa37.43■■■■□ 3.58
ECH1-212ENST00000600178 BICRAQ9NZM4 1560 aa37.28■■■■□ 3.56
ECH1-212ENST00000600178 ZCCHC6Q5VYS8 1495 aaKnown RBP36.94■■■■□ 3.5
ECH1-212ENST00000600178 DCAF1Q9Y4B6 1507 aa36.86■■■■□ 3.49
ECH1-212ENST00000600178 SHROOM4Q9ULL8 1493 aa36.74■■■■□ 3.47
ECH1-212ENST00000600178 SCRIBQ14160 1630 aa36.59■■■■□ 3.45
ECH1-212ENST00000600178 CC2D2AQ9P2K1 1620 aa36.52■■■■□ 3.44
ECH1-212ENST00000600178 CECR2Q9BXF3 1484 aa36.44■■■■□ 3.42
ECH1-212ENST00000600178 EIF4G1Q04637 1599 aaKnown RBP36.37■■■■□ 3.41
ECH1-212ENST00000600178 DNAJC5Q9H3Z4 198 aa35.23■■■■□ 3.23
ECH1-212ENST00000600178 NCAPD3P42695 1498 aa35.12■■■■□ 3.21
ECH1-212ENST00000600178 ATAD2BQ9ULI0 1458 aa34.97■■■■□ 3.19
ECH1-212ENST00000600178 CUX2O14529 1486 aa34.95■■■■□ 3.19
ECH1-212ENST00000600178 ERCC6Q03468 1493 aa34.9■■■■□ 3.18
ECH1-212ENST00000600178 SMARCA4P51532 1647 aa34.88■■■■□ 3.17
ECH1-212ENST00000600178 SMARCA2P51531 1590 aa34.87■■■■□ 3.17
ECH1-212ENST00000600178 HMGXB3Q12766 1538 aa34.84■■■■□ 3.17
ECH1-212ENST00000600178 BAZ1AQ9NRL2 1556 aaPredicted RBP34.66■■■■□ 3.14
ECH1-212ENST00000600178 NESP48681 1621 aa34.66■■■■□ 3.14
ECH1-212ENST00000600178 BAZ1BQ9UIG0 1483 aaKnown RBP34.61■■■■□ 3.13
ECH1-212ENST00000600178 PEG3Q9GZU2 1588 aa34.55■■■■□ 3.12
ECH1-212ENST00000600178 MROH2BQ7Z745 1585 aa34.39■■■■□ 3.1
ECH1-212ENST00000600178 THOC2Q8NI27 1593 aaKnown RBP34.37■■■■□ 3.09
ECH1-212ENST00000600178 LAMC3Q9Y6N6 1575 aa34.37■■■■□ 3.09
ECH1-212ENST00000600178 KIF21AQ7Z4S6 1674 aa34.22■■■■□ 3.07
ECH1-212ENST00000600178 PDS5BQ9NTI5 1447 aa34.17■■■■□ 3.06
ECH1-212ENST00000600178 CADPSQ9ULU8 1353 aa34.03■■■■□ 3.04
ECH1-212ENST00000600178 WIZO95785 1651 aa33.97■■■■□ 3.03
ECH1-212ENST00000600178 MRC2Q9UBG0 1479 aa33.9■■■■□ 3.02
ECH1-212ENST00000600178 WDR62O43379 1518 aa33.84■■■■□ 3.01
ECH1-212ENST00000600178 CEP164Q9UPV0 1460 aa33.7■■■□□ 2.99
ECH1-212ENST00000600178 FANCD2Q9BXW9 1451 aa33.64■■■□□ 2.98
ECH1-212ENST00000600178 CFTRP13569 1480 aa33.6■■■□□ 2.97
ECH1-212ENST00000600178 RSF1Q96T23 1441 aaPredicted RBP33.57■■■□□ 2.96
ECH1-212ENST00000600178 TRIM41Q8WV44 630 aa33.55■■■□□ 2.96
ECH1-212ENST00000600178 TOP2AP11388 1531 aaKnown RBP33.52■■■□□ 2.96
ECH1-212ENST00000600178 URB2Q14146 1524 aaKnown RBP33.4■■■□□ 2.94
ECH1-212ENST00000600178 OSCARQ8IYS5 282 aa33.29■■■□□ 2.92
ECH1-212ENST00000600178 PRDM2Q13029 1718 aa33.28■■■□□ 2.92
ECH1-212ENST00000600178 CCDC88BA6NC98 1476 aa33.14■■■□□ 2.9
ECH1-212ENST00000600178 IFT140Q96RY7 1462 aa33.05■■■□□ 2.88
ECH1-212ENST00000600178 ZNF608Q9ULD9 1512 aaPredicted RBP33.02■■■□□ 2.88
ECH1-212ENST00000600178 TOPBP1Q92547 1522 aa32.99■■■□□ 2.87
ECH1-212ENST00000600178 RIMBP3CA6NJZ7 1639 aa32.92■■■□□ 2.86
ECH1-212ENST00000600178 RIMBP3BA6NNM3 1639 aa32.92■■■□□ 2.86
ECH1-212ENST00000600178 RIMBP3Q9UFD9 1639 aa32.92■■■□□ 2.86
ECH1-212ENST00000600178 ABCC8Q09428 1581 aa32.89■■■□□ 2.86
ECH1-212ENST00000600178 DNMBPQ6XZF7 1577 aa32.85■■■□□ 2.85
ECH1-212ENST00000600178 EIF4G3O43432 1585 aaKnown RBP32.84■■■□□ 2.85
ECH1-212ENST00000600178 ARHGEF11O15085 1522 aa32.78■■■□□ 2.84
ECH1-212ENST00000600178 TARBP1Q13395 1621 aaKnown RBP32.74■■■□□ 2.83
ECH1-212ENST00000600178 AQRO60306 1485 aaKnown RBP eCLIP32.69■■■□□ 2.827e-9■■■■■ 30.5
ECH1-212ENST00000600178 CHD1O14646 1710 aa32.66■■■□□ 2.82
ECH1-212ENST00000600178 POLA1P09884 1462 aaPredicted RBP32.63■■■□□ 2.81
ECH1-212ENST00000600178 CYB5RLQ6IPT4 315 aa32.53■■■□□ 2.8
ECH1-212ENST00000600178 RAD54L2Q9Y4B4 1467 aa32.52■■■□□ 2.8
ECH1-212ENST00000600178 FBLN2P98095 1184 aa32.5■■■□□ 2.79
ECH1-212ENST00000600178 SOGA1O94964 1423 aa32.47■■■□□ 2.79
ECH1-212ENST00000600178 ARAP1Q96P48 1450 aa32.44■■■□□ 2.78
ECH1-212ENST00000600178 TDRD9Q8NDG6 1382 aaKnown RBP32.44■■■□□ 2.78
ECH1-212ENST00000600178 FGD5Q6ZNL6 1462 aa32.39■■■□□ 2.78
ECH1-212ENST00000600178 WDR97A6NE52 1622 aa32.37■■■□□ 2.77
ECH1-212ENST00000600178 SNAPC4Q5SXM2 1469 aa32.35■■■□□ 2.77
ECH1-212ENST00000600178 CUX1P39880 1505 aa32.33■■■□□ 2.77
ECH1-212ENST00000600178 CLASP1Q7Z460 1538 aa32.27■■■□□ 2.76
ECH1-212ENST00000600178 MAGI1Q96QZ7 1491 aaPredicted RBP32.25■■■□□ 2.75
ECH1-212ENST00000600178 TRHP20396 242 aaPredicted RBP32.24■■■□□ 2.75
ECH1-212ENST00000600178 CHMP7Q8WUX9 453 aaPredicted RBP32.23■■■□□ 2.75
ECH1-212ENST00000600178 GRIN2BQ13224 1484 aa32.23■■■□□ 2.75
ECH1-212ENST00000600178 SYNJ1O43426 1573 aa32.21■■■□□ 2.75
ECH1-212ENST00000600178 SYNJ2O15056 1496 aa32.16■■■□□ 2.74
ECH1-212ENST00000600178 PBRM1Q86U86 1689 aa32.11■■■□□ 2.73
ECH1-212ENST00000600178 GAPVD1Q14C86 1478 aa32.07■■■□□ 2.72
ECH1-212ENST00000600178 ABCA10Q8WWZ4 1543 aa32■■■□□ 2.71
ECH1-212ENST00000600178 ABCA5Q8WWZ7 1642 aa32■■■□□ 2.71
ECH1-212ENST00000600178 SUPT5HO00267 1087 aaKnown RBP31.86■■■□□ 2.69
ECH1-212ENST00000600178 GRIN2AQ12879 1464 aa31.82■■■□□ 2.68
ECH1-212ENST00000600178 WRNQ14191 1432 aaPredicted RBP eCLIP31.82■■■□□ 2.68
ECH1-212ENST00000600178 ADAMTS12P58397 1594 aa31.77■■■□□ 2.68
ECH1-212ENST00000600178 BIVM-ERCC5R4GMW8 1640 aa31.75■■■□□ 2.67
ECH1-212ENST00000600178 ERCC6L2Q5T890 1561 aa31.75■■■□□ 2.67
ECH1-212ENST00000600178 TOP2BQ02880 1626 aa31.75■■■□□ 2.67
ECH1-212ENST00000600178 CEP170Q5SW79 1584 aa31.73■■■□□ 2.67
ECH1-212ENST00000600178 NUP160Q12769 1436 aa31.72■■■□□ 2.67
ECH1-212ENST00000600178 FHAD1B1AJZ9 1412 aa31.66■■■□□ 2.66
ECH1-212ENST00000600178 SHROOM2Q13796 1616 aa31.64■■■□□ 2.65
ECH1-212ENST00000600178 ERICH3Q5RHP9 1530 aa31.6■■■□□ 2.65
ECH1-212ENST00000600178 AEBP2Q6ZN18 517 aaPredicted RBP31.49■■■□□ 2.63
ECH1-212ENST00000600178 PRG4Q92954 1404 aaPredicted RBP31.43■■■□□ 2.62
ECH1-212ENST00000600178 JPH4Q96JJ6 628 aa31.37■■■□□ 2.61
ECH1-212ENST00000600178 KIF13AQ9H1H9 1805 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms