RNA–Protein interactions for RNA: ENST00000600178.5

ECH1-212, Transcript of enoyl-CoA hydratase 1, humanhuman

TSL 2

Gene ECH1, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1-212ENST00000600178 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.53■□□□□ 0.083e-33■■■■■ 42.8
ECH1-212ENST00000600178 HNRNPKP61978 463 aaKnown RBP eCLIP18■□□□□ 0.477e-25■■■■■ 81.5
ECH1-212ENST00000600178 DDX3XO00571 662 aaKnown RBP eCLIP17.38■□□□□ 0.371e-21■■■□□ 19.2
ECH1-212ENST00000600178 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.77■□□□□ 0.289e-17■■■□□ 16.7
ECH1-212ENST00000600178 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.58■□□□□ 0.562e-15■■■■■ 372.6
ECH1-212ENST00000600178 ILF3Q12906 894 aaKnown RBP eCLIP17.62■□□□□ 0.412e-12■■■□□ 17.1
ECH1-212ENST00000600178 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.79■■□□□ 1.081e-10■■■■□ 20.8
ECH1-212ENST00000600178 QKIQ96PU8 341 aaKnown RBP eCLIP17.02■□□□□ 0.322e-10■□□□□ 11.3
ECH1-212ENST00000600178 PCBP1Q15365 356 aaKnown RBP eCLIP19.62■□□□□ 0.739e-10■■■■■ 59.4
ECH1-212ENST00000600178 YBX3P16989 372 aaKnown RBP eCLIP24.65■■□□□ 1.549e-10■■□□□ 11.4
ECH1-212ENST00000600178 PCBP2Q15366 365 aaKnown RBP eCLIP16.1■□□□□ 0.171e-9■■■■■ 153.4
ECH1-212ENST00000600178 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.5■□□□□ 0.871e-9■■■■□ 19.4
ECH1-212ENST00000600178 AQRO60306 1485 aaKnown RBP eCLIP32.69■■■□□ 2.827e-9■■■■■ 30.5
ECH1-212ENST00000600178 PPIGQ13427 754 aaKnown RBP eCLIP21.03■□□□□ 0.963e-8■□□□□ 9.9
ECH1-212ENST00000600178 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.75■□□□□ 0.275e-8■■■□□ 19.2
ECH1-212ENST00000600178 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.6■□□□□ 0.091e-7■■■□□ 17.5
ECH1-212ENST00000600178 EFTUD2Q15029 972 aaKnown RBP eCLIP16.25■□□□□ 0.192e-7■■■■■ 40.3
ECH1-212ENST00000600178 RPS3P23396 243 aaKnown RBP eCLIP16.68■□□□□ 0.262e-7■■■■■ 29.4
ECH1-212ENST00000600178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.7■■■□□ 2.022e-7■□□□□ 9.4
ECH1-212ENST00000600178 FMR1Q06787 632 aaKnown RBP eCLIP23.24■■□□□ 1.313e-7■■■□□ 15.5
ECH1-212ENST00000600178 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.06■□□□□ 0.968e-7■■■■□ 19.5
ECH1-212ENST00000600178 G3BP1Q13283 466 aaKnown RBP eCLIP21.66■■□□□ 1.068e-7■■□□□ 13.9
ECH1-212ENST00000600178 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.55■■■□□ 2.322e-6■■□□□ 11.5
ECH1-212ENST00000600178 LARP4Q71RC2 724 aaKnown RBP eCLIP15.87■□□□□ 0.134e-6■■■□□ 18.9
ECH1-212ENST00000600178 RBM22Q9NW64 420 aaKnown RBP eCLIP17.37■□□□□ 0.374e-6■■■■□ 24.3
ECH1-212ENST00000600178 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.11■■■□□ 2.095e-6■■■■■ 46.2
ECH1-212ENST00000600178 SF3A3Q12874 501 aaKnown RBP eCLIP14.72□□□□□ -0.055e-6■■■■■ 39.5
Retrieved 27 of 27 RNA–protein pairs in 6.2 ms