RNA–Protein interactions for RNA: ENST00000599966.5

PPFIA4-210, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 3,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-210ENST00000599966 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
PPFIA4-210ENST00000599966 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
PPFIA4-210ENST00000599966 SUPT5HO00267 1087 aaKnown RBP22.06■■□□□ 1.12
PPFIA4-210ENST00000599966 DCAF8L2P0C7V8 631 aa21.96■■□□□ 1.11
PPFIA4-210ENST00000599966 HRCP23327 699 aa21.57■■□□□ 1.04
PPFIA4-210ENST00000599966 PPARGC1BQ86YN6 1023 aaKnown RBP21.54■■□□□ 1.04
PPFIA4-210ENST00000599966 CCDC180Q9P1Z9 1646 aa21.49■■□□□ 1.03
PPFIA4-210ENST00000599966 PCGF6Q9BYE7 350 aa21.38■■□□□ 1.01
PPFIA4-210ENST00000599966 ZCCHC6Q5VYS8 1495 aaKnown RBP21.11■□□□□ 0.97
PPFIA4-210ENST00000599966 CHIC1Q5VXU3 224 aa21.07■□□□□ 0.96
PPFIA4-210ENST00000599966 MYO15BQ96JP2 1530 aa20.95■□□□□ 0.94
PPFIA4-210ENST00000599966 LOC105371045A0A1W2PR82 267 aa20.83■□□□□ 0.92
PPFIA4-210ENST00000599966 EHMT2Q96KQ7 1210 aa20.73■□□□□ 0.91
PPFIA4-210ENST00000599966 PELP1Q8IZL8 1130 aaKnown RBP20.71■□□□□ 0.91
PPFIA4-210ENST00000599966 SCAF1Q9H7N4 1312 aaKnown RBP20.64■□□□□ 0.89
PPFIA4-210ENST00000599966 FAM9AQ8IZU1 332 aaPredicted RBP20.55■□□□□ 0.88
PPFIA4-210ENST00000599966 DCAF1Q9Y4B6 1507 aa20.4■□□□□ 0.86
PPFIA4-210ENST00000599966 TRIM26Q12899 539 aaPredicted RBP20.33■□□□□ 0.84
PPFIA4-210ENST00000599966 TRIM41Q8WV44 630 aa20.27■□□□□ 0.84
PPFIA4-210ENST00000599966 SCRIBQ14160 1630 aa20.21■□□□□ 0.83
PPFIA4-210ENST00000599966 ABCC9O60706 1549 aa20.13■□□□□ 0.81
PPFIA4-210ENST00000599966 NEUROD1Q13562 356 aa20.07■□□□□ 0.8
PPFIA4-210ENST00000599966 RSF1Q96T23 1441 aaPredicted RBP20.06■□□□□ 0.8
PPFIA4-210ENST00000599966 ZEB1P37275 1124 aaPredicted RBP20.02■□□□□ 0.8
PPFIA4-210ENST00000599966 GTF3C3Q9Y5Q9 886 aa19.99■□□□□ 0.79
PPFIA4-210ENST00000599966 TTBK1Q5TCY1 1321 aaPredicted RBP19.99■□□□□ 0.79
PPFIA4-210ENST00000599966 ACIN1Q9UKV3 1341 aaKnown RBP19.97■□□□□ 0.79
PPFIA4-210ENST00000599966 CECR2Q9BXF3 1484 aa19.88■□□□□ 0.77
PPFIA4-210ENST00000599966 RB1CC1Q8TDY2 1594 aa19.86■□□□□ 0.77
PPFIA4-210ENST00000599966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
PPFIA4-210ENST00000599966 MYT1Q01538 1121 aa19.79■□□□□ 0.76
PPFIA4-210ENST00000599966 NACADO15069 1562 aa19.73■□□□□ 0.75
PPFIA4-210ENST00000599966 YTHDC1Q96MU7 727 aaKnown RBP19.69■□□□□ 0.74
PPFIA4-210ENST00000599966 MROH2BQ7Z745 1585 aa19.67■□□□□ 0.74
PPFIA4-210ENST00000599966 CCER1Q8TC90 406 aaPredicted RBP19.66■□□□□ 0.74
PPFIA4-210ENST00000599966 CENPBP07199 599 aaPredicted RBP19.66■□□□□ 0.74
PPFIA4-210ENST00000599966 DIEXFQ68CQ4 756 aaKnown RBP19.65■□□□□ 0.74
PPFIA4-210ENST00000599966 PABPN1Q86U42 306 aaKnown RBP eCLIP19.6■□□□□ 0.73
PPFIA4-210ENST00000599966 WIZO95785 1651 aa19.54■□□□□ 0.72
PPFIA4-210ENST00000599966 RANGAP1P46060 587 aaPredicted RBP19.5■□□□□ 0.71
PPFIA4-210ENST00000599966 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
PPFIA4-210ENST00000599966 ABCC8Q09428 1581 aa19.34■□□□□ 0.69
PPFIA4-210ENST00000599966 UNC13AQ9UPW8 1703 aa19.33■□□□□ 0.68
PPFIA4-210ENST00000599966 CCDC88BA6NC98 1476 aa19.28■□□□□ 0.68
PPFIA4-210ENST00000599966 SOGA1O94964 1423 aa19.26■□□□□ 0.67
PPFIA4-210ENST00000599966 MIER1Q8N108 512 aa19.21■□□□□ 0.67
PPFIA4-210ENST00000599966 HNRNPUL2Q1KMD3 747 aaKnown RBP19.18■□□□□ 0.66
PPFIA4-210ENST00000599966 RUSC2Q8N2Y8 1516 aa19.18■□□□□ 0.66
PPFIA4-210ENST00000599966 CSRNP3Q8WYN3 585 aa19.18■□□□□ 0.66
PPFIA4-210ENST00000599966 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
PPFIA4-210ENST00000599966 ZNF316A6NFI3 1004 aaPredicted RBP19.14■□□□□ 0.65
PPFIA4-210ENST00000599966 CEP162Q5TB80 1403 aa19.1■□□□□ 0.65
PPFIA4-210ENST00000599966 BCL11AQ9H165 835 aa19.02■□□□□ 0.64
PPFIA4-210ENST00000599966 TOP2AP11388 1531 aaKnown RBP19■□□□□ 0.63
PPFIA4-210ENST00000599966 SMARCA4P51532 1647 aa19■□□□□ 0.63
PPFIA4-210ENST00000599966 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
PPFIA4-210ENST00000599966 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
PPFIA4-210ENST00000599966 APLP2Q06481 763 aa18.93■□□□□ 0.62
PPFIA4-210ENST00000599966 TNIKQ9UKE5 1360 aa18.91■□□□□ 0.62
PPFIA4-210ENST00000599966 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
PPFIA4-210ENST00000599966 WRNQ14191 1432 aaPredicted RBP eCLIP18.89■□□□□ 0.61
PPFIA4-210ENST00000599966 SUPT16HQ9Y5B9 1047 aaKnown RBP18.87■□□□□ 0.61
PPFIA4-210ENST00000599966 ANP32EQ9BTT0 268 aa18.86■□□□□ 0.61
PPFIA4-210ENST00000599966 TSHZ2Q9NRE2 1034 aa18.83■□□□□ 0.61
PPFIA4-210ENST00000599966 BCANQ96GW7 911 aa18.82■□□□□ 0.6
PPFIA4-210ENST00000599966 ITGAEP38570 1179 aa18.8■□□□□ 0.6
PPFIA4-210ENST00000599966 GOLGA3Q08378 1498 aa18.77■□□□□ 0.6
PPFIA4-210ENST00000599966 CLIP1P30622 1438 aa18.75■□□□□ 0.59
PPFIA4-210ENST00000599966 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
PPFIA4-210ENST00000599966 RAPGEF2Q9Y4G8 1499 aa18.68■□□□□ 0.58
PPFIA4-210ENST00000599966 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
PPFIA4-210ENST00000599966 BAZ1BQ9UIG0 1483 aaKnown RBP18.67■□□□□ 0.58
PPFIA4-210ENST00000599966 EEA1Q15075 1411 aa18.67■□□□□ 0.58
PPFIA4-210ENST00000599966 ATAD2BQ9ULI0 1458 aa18.64■□□□□ 0.58
PPFIA4-210ENST00000599966 ATP1B4Q9UN42 357 aaPredicted RBP18.62■□□□□ 0.57
PPFIA4-210ENST00000599966 KANK4Q5T7N3 995 aaPredicted RBP18.62■□□□□ 0.57
PPFIA4-210ENST00000599966 CEP164Q9UPV0 1460 aa18.61■□□□□ 0.57
PPFIA4-210ENST00000599966 KCNH8Q96L42 1107 aa18.58■□□□□ 0.57
PPFIA4-210ENST00000599966 P3H3Q8IVL6 736 aa18.54■□□□□ 0.56
PPFIA4-210ENST00000599966 VPS8Q8N3P4 1428 aa18.52■□□□□ 0.56
PPFIA4-210ENST00000599966 FKBP8Q14318 412 aa18.48■□□□□ 0.55
PPFIA4-210ENST00000599966 KIF21BO75037 1637 aa18.41■□□□□ 0.54
PPFIA4-210ENST00000599966 RBM19Q9Y4C8 960 aaKnown RBP18.4■□□□□ 0.54
PPFIA4-210ENST00000599966 FAM50AQ14320 339 aaKnown RBP18.36■□□□□ 0.53
PPFIA4-210ENST00000599966 CLSPNQ9HAW4 1339 aa18.33■□□□□ 0.53
PPFIA4-210ENST00000599966 HIRIP3Q9BW71 556 aaPredicted RBP18.32■□□□□ 0.52
PPFIA4-210ENST00000599966 ARAP1Q96P48 1450 aa18.3■□□□□ 0.52
PPFIA4-210ENST00000599966 MSH5O43196 834 aa18.28■□□□□ 0.52
PPFIA4-210ENST00000599966 DHX57Q6P158 1386 aaKnown RBP18.28■□□□□ 0.52
PPFIA4-210ENST00000599966 HMGXB3Q12766 1538 aa18.27■□□□□ 0.51
PPFIA4-210ENST00000599966 PRKCSHP14314 528 aaPredicted RBP18.27■□□□□ 0.51
PPFIA4-210ENST00000599966 KIF27Q86VH2 1401 aa18.26■□□□□ 0.51
PPFIA4-210ENST00000599966 TRIM52Q96A61 297 aa18.26■□□□□ 0.51
PPFIA4-210ENST00000599966 SIN3AQ96ST3 1273 aa18.24■□□□□ 0.51
PPFIA4-210ENST00000599966 CUX1P39880 1505 aa18.24■□□□□ 0.51
PPFIA4-210ENST00000599966 TOP2BQ02880 1626 aa18.23■□□□□ 0.51
PPFIA4-210ENST00000599966 PRXQ9BXM0 1461 aa18.21■□□□□ 0.51
PPFIA4-210ENST00000599966 CUX2O14529 1486 aa18.21■□□□□ 0.51
PPFIA4-210ENST00000599966 NEFLP07196 543 aa18.2■□□□□ 0.5
PPFIA4-210ENST00000599966 DDX10Q13206 875 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms