RNA–Protein interactions for RNA: ENST00000599417.1

MED29-205, Transcript of mediator complex subunit 29, humanhuman

TSL 2

Gene MED29, Length 2,941 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED29-205ENST00000599417 NISCHQ9Y2I1 1504 aa29.19■■■□□ 2.26
MED29-205ENST00000599417 CCDC180Q9P1Z9 1646 aa25.24■■□□□ 1.63
MED29-205ENST00000599417 ZCCHC6Q5VYS8 1495 aaKnown RBP24.6■■□□□ 1.53
MED29-205ENST00000599417 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
MED29-205ENST00000599417 DCAF8L2P0C7V8 631 aa24.1■■□□□ 1.45
MED29-205ENST00000599417 DCAF1Q9Y4B6 1507 aa24.06■■□□□ 1.44
MED29-205ENST00000599417 ABCC9O60706 1549 aa23.69■■□□□ 1.38
MED29-205ENST00000599417 MYO15BQ96JP2 1530 aa23.62■■□□□ 1.37
MED29-205ENST00000599417 NACADO15069 1562 aa23.43■■□□□ 1.34
MED29-205ENST00000599417 SUPT5HO00267 1087 aaKnown RBP23.41■■□□□ 1.34
MED29-205ENST00000599417 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
MED29-205ENST00000599417 HRCP23327 699 aa23.26■■□□□ 1.31
MED29-205ENST00000599417 RB1CC1Q8TDY2 1594 aa23.17■■□□□ 1.3
MED29-205ENST00000599417 PPARGC1BQ86YN6 1023 aaKnown RBP22.85■■□□□ 1.25
MED29-205ENST00000599417 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
MED29-205ENST00000599417 UNC13AQ9UPW8 1703 aa22.79■■□□□ 1.24
MED29-205ENST00000599417 PCGF6Q9BYE7 350 aa22.75■■□□□ 1.23
MED29-205ENST00000599417 CECR2Q9BXF3 1484 aa22.72■■□□□ 1.23
MED29-205ENST00000599417 MROH2BQ7Z745 1585 aa22.62■■□□□ 1.21
MED29-205ENST00000599417 PELP1Q8IZL8 1130 aaKnown RBP22.58■■□□□ 1.21
MED29-205ENST00000599417 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
MED29-205ENST00000599417 BICRAQ9NZM4 1560 aa22.53■■□□□ 1.2
MED29-205ENST00000599417 BAZ1AQ9NRL2 1556 aaPredicted RBP22.49■■□□□ 1.19
MED29-205ENST00000599417 WIZO95785 1651 aa22.47■■□□□ 1.19
MED29-205ENST00000599417 PABPN1Q86U42 306 aaKnown RBP eCLIP22.44■■□□□ 1.18
MED29-205ENST00000599417 SMARCA4P51532 1647 aa22.38■■□□□ 1.17
MED29-205ENST00000599417 TOP2AP11388 1531 aaKnown RBP22.18■■□□□ 1.14
MED29-205ENST00000599417 SCAF1Q9H7N4 1312 aaKnown RBP22.11■■□□□ 1.13
MED29-205ENST00000599417 PEG3Q9GZU2 1588 aa22.04■■□□□ 1.12
MED29-205ENST00000599417 SMARCA2P51531 1590 aa22.01■■□□□ 1.11
MED29-205ENST00000599417 CCDC88BA6NC98 1476 aa21.99■■□□□ 1.11
MED29-205ENST00000599417 EIF4G1Q04637 1599 aaKnown RBP21.98■■□□□ 1.11
MED29-205ENST00000599417 ATAD2BQ9ULI0 1458 aa21.93■■□□□ 1.1
MED29-205ENST00000599417 TRIM26Q12899 539 aaPredicted RBP21.92■■□□□ 1.1
MED29-205ENST00000599417 TRIM41Q8WV44 630 aa21.92■■□□□ 1.1
MED29-205ENST00000599417 LOC105371045A0A1W2PR82 267 aa21.91■■□□□ 1.1
MED29-205ENST00000599417 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
MED29-205ENST00000599417 ZEB1P37275 1124 aaPredicted RBP21.76■■□□□ 1.07
MED29-205ENST00000599417 MYT1Q01538 1121 aa21.7■■□□□ 1.06
MED29-205ENST00000599417 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
MED29-205ENST00000599417 HMGXB3Q12766 1538 aa21.64■■□□□ 1.05
MED29-205ENST00000599417 NCAPD3P42695 1498 aa21.64■■□□□ 1.05
MED29-205ENST00000599417 FAM9AQ8IZU1 332 aaPredicted RBP21.62■■□□□ 1.05
MED29-205ENST00000599417 ACIN1Q9UKV3 1341 aaKnown RBP21.5■■□□□ 1.03
MED29-205ENST00000599417 NEUROD1Q13562 356 aa21.46■■□□□ 1.03
MED29-205ENST00000599417 WRNQ14191 1432 aaPredicted RBP eCLIP21.44■■□□□ 1.02
MED29-205ENST00000599417 CC2D2AQ9P2K1 1620 aa21.42■■□□□ 1.02
MED29-205ENST00000599417 SYNJ1O43426 1573 aa21.38■■□□□ 1.01
MED29-205ENST00000599417 EHMT2Q96KQ7 1210 aa21.38■■□□□ 1.01
MED29-205ENST00000599417 GTF3C3Q9Y5Q9 886 aa21.36■■□□□ 1.01
MED29-205ENST00000599417 SOGA1O94964 1423 aa21.34■■□□□ 1.01
MED29-205ENST00000599417 CFTRP13569 1480 aa21.28■■□□□ 1
MED29-205ENST00000599417 RUSC2Q8N2Y8 1516 aa21.27■□□□□ 0.99
MED29-205ENST00000599417 EEA1Q15075 1411 aa21.24■□□□□ 0.99
MED29-205ENST00000599417 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
MED29-205ENST00000599417 BIVM-ERCC5R4GMW8 1640 aa21.19■□□□□ 0.98
MED29-205ENST00000599417 CENPBP07199 599 aaPredicted RBP21.18■□□□□ 0.98
MED29-205ENST00000599417 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
MED29-205ENST00000599417 CSRNP3Q8WYN3 585 aa21.15■□□□□ 0.98
MED29-205ENST00000599417 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
MED29-205ENST00000599417 CUX1P39880 1505 aa21.12■□□□□ 0.97
MED29-205ENST00000599417 DIEXFQ68CQ4 756 aaKnown RBP21.06■□□□□ 0.96
MED29-205ENST00000599417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.04■□□□□ 0.96
MED29-205ENST00000599417 GOLGA3Q08378 1498 aa21.03■□□□□ 0.96
MED29-205ENST00000599417 TNIKQ9UKE5 1360 aa21.01■□□□□ 0.95
MED29-205ENST00000599417 KIF21BO75037 1637 aa21■□□□□ 0.95
MED29-205ENST00000599417 CEP164Q9UPV0 1460 aa20.98■□□□□ 0.95
MED29-205ENST00000599417 CCER1Q8TC90 406 aaPredicted RBP20.98■□□□□ 0.95
MED29-205ENST00000599417 CEP162Q5TB80 1403 aa20.97■□□□□ 0.95
MED29-205ENST00000599417 UBTFP17480 764 aaKnown RBP20.95■□□□□ 0.94
MED29-205ENST00000599417 NESP48681 1621 aa20.92■□□□□ 0.94
MED29-205ENST00000599417 FANCD2Q9BXW9 1451 aa20.92■□□□□ 0.94
MED29-205ENST00000599417 RAPGEF2Q9Y4G8 1499 aa20.88■□□□□ 0.93
MED29-205ENST00000599417 DNAJC5BQ9UF47 199 aa20.88■□□□□ 0.93
MED29-205ENST00000599417 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
MED29-205ENST00000599417 KIF27Q86VH2 1401 aa20.85■□□□□ 0.93
MED29-205ENST00000599417 FGD5Q6ZNL6 1462 aa20.83■□□□□ 0.92
MED29-205ENST00000599417 PRXQ9BXM0 1461 aa20.81■□□□□ 0.92
MED29-205ENST00000599417 YTHDC1Q96MU7 727 aaKnown RBP20.8■□□□□ 0.92
MED29-205ENST00000599417 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
MED29-205ENST00000599417 DNMBPQ6XZF7 1577 aa20.78■□□□□ 0.92
MED29-205ENST00000599417 CUX2O14529 1486 aa20.76■□□□□ 0.91
MED29-205ENST00000599417 TOPBP1Q92547 1522 aa20.74■□□□□ 0.91
MED29-205ENST00000599417 CLIP1P30622 1438 aa20.72■□□□□ 0.91
MED29-205ENST00000599417 POLA1P09884 1462 aaPredicted RBP20.67■□□□□ 0.9
MED29-205ENST00000599417 PDS5BQ9NTI5 1447 aa20.67■□□□□ 0.9
MED29-205ENST00000599417 URB2Q14146 1524 aaKnown RBP20.66■□□□□ 0.9
MED29-205ENST00000599417 RAD54L2Q9Y4B4 1467 aa20.65■□□□□ 0.9
MED29-205ENST00000599417 KIF21AQ7Z4S6 1674 aa20.65■□□□□ 0.9
MED29-205ENST00000599417 IGF1RP08069 1367 aa20.64■□□□□ 0.9
MED29-205ENST00000599417 ABCA10Q8WWZ4 1543 aa20.61■□□□□ 0.89
MED29-205ENST00000599417 ZNF316A6NFI3 1004 aaPredicted RBP20.6■□□□□ 0.89
MED29-205ENST00000599417 RANGAP1P46060 587 aaPredicted RBP20.6■□□□□ 0.89
MED29-205ENST00000599417 VPS8Q8N3P4 1428 aa20.58■□□□□ 0.88
MED29-205ENST00000599417 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
MED29-205ENST00000599417 TTBK1Q5TCY1 1321 aaPredicted RBP20.54■□□□□ 0.88
MED29-205ENST00000599417 WDR97A6NE52 1622 aa20.54■□□□□ 0.88
MED29-205ENST00000599417 MIER1Q8N108 512 aa20.53■□□□□ 0.88
MED29-205ENST00000599417 ARAP1Q96P48 1450 aa20.5■□□□□ 0.87
MED29-205ENST00000599417 ABCA5Q8WWZ7 1642 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms