RNA–Protein interactions for RNA: ENST00000599029.2

SPHK2-208, Transcript of sphingosine kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK2, Length 3,085 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2-208ENST00000599029 NISCHQ9Y2I1 1504 aa27.41■■□□□ 1.98
SPHK2-208ENST00000599029 CCDC180Q9P1Z9 1646 aa23.44■■□□□ 1.34
SPHK2-208ENST00000599029 DCAF8L2P0C7V8 631 aa23.31■■□□□ 1.32
SPHK2-208ENST00000599029 SHROOM4Q9ULL8 1493 aa23.27■■□□□ 1.32
SPHK2-208ENST00000599029 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
SPHK2-208ENST00000599029 SUPT5HO00267 1087 aaKnown RBP22.55■■□□□ 1.2
SPHK2-208ENST00000599029 ABCC9O60706 1549 aa22.53■■□□□ 1.2
SPHK2-208ENST00000599029 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
SPHK2-208ENST00000599029 SCRIBQ14160 1630 aa22.11■■□□□ 1.13
SPHK2-208ENST00000599029 MYO15BQ96JP2 1530 aa21.88■■□□□ 1.09
SPHK2-208ENST00000599029 NACADO15069 1562 aa21.87■■□□□ 1.09
SPHK2-208ENST00000599029 RB1CC1Q8TDY2 1594 aa21.69■■□□□ 1.06
SPHK2-208ENST00000599029 CECR2Q9BXF3 1484 aa21.53■■□□□ 1.04
SPHK2-208ENST00000599029 PABPN1Q86U42 306 aaKnown RBP eCLIP21.52■■□□□ 1.04
SPHK2-208ENST00000599029 RSF1Q96T23 1441 aaPredicted RBP21.52■■□□□ 1.04
SPHK2-208ENST00000599029 HRCP23327 699 aa21.49■■□□□ 1.03
SPHK2-208ENST00000599029 CHIC1Q5VXU3 224 aa21.47■■□□□ 1.03
SPHK2-208ENST00000599029 PCGF6Q9BYE7 350 aa21.35■■□□□ 1.01
SPHK2-208ENST00000599029 MROH2BQ7Z745 1585 aa21.35■■□□□ 1.01
SPHK2-208ENST00000599029 UNC13AQ9UPW8 1703 aa21.33■■□□□ 1.01
SPHK2-208ENST00000599029 WIZO95785 1651 aa21.2■□□□□ 0.98
SPHK2-208ENST00000599029 BICRAQ9NZM4 1560 aa21.12■□□□□ 0.97
SPHK2-208ENST00000599029 PPARGC1BQ86YN6 1023 aaKnown RBP21.1■□□□□ 0.97
SPHK2-208ENST00000599029 BAZ1AQ9NRL2 1556 aaPredicted RBP21.08■□□□□ 0.96
SPHK2-208ENST00000599029 SMARCA4P51532 1647 aa20.98■□□□□ 0.95
SPHK2-208ENST00000599029 LOC105371045A0A1W2PR82 267 aa20.96■□□□□ 0.95
SPHK2-208ENST00000599029 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
SPHK2-208ENST00000599029 FAM9AQ8IZU1 332 aaPredicted RBP20.91■□□□□ 0.94
SPHK2-208ENST00000599029 EHMT2Q96KQ7 1210 aa20.89■□□□□ 0.93
SPHK2-208ENST00000599029 TOP2AP11388 1531 aaKnown RBP20.77■□□□□ 0.91
SPHK2-208ENST00000599029 CCDC88BA6NC98 1476 aa20.76■□□□□ 0.91
SPHK2-208ENST00000599029 TRIM26Q12899 539 aaPredicted RBP20.73■□□□□ 0.91
SPHK2-208ENST00000599029 PELP1Q8IZL8 1130 aaKnown RBP20.72■□□□□ 0.91
SPHK2-208ENST00000599029 SMARCA2P51531 1590 aa20.67■□□□□ 0.9
SPHK2-208ENST00000599029 ATAD2BQ9ULI0 1458 aa20.63■□□□□ 0.89
SPHK2-208ENST00000599029 ABCC8Q09428 1581 aa20.58■□□□□ 0.89
SPHK2-208ENST00000599029 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
SPHK2-208ENST00000599029 PEG3Q9GZU2 1588 aa20.5■□□□□ 0.87
SPHK2-208ENST00000599029 EIF4G1Q04637 1599 aaKnown RBP20.49■□□□□ 0.87
SPHK2-208ENST00000599029 ZEB1P37275 1124 aaPredicted RBP20.44■□□□□ 0.86
SPHK2-208ENST00000599029 SOGA1O94964 1423 aa20.29■□□□□ 0.84
SPHK2-208ENST00000599029 NCAPD3P42695 1498 aa20.28■□□□□ 0.84
SPHK2-208ENST00000599029 WRNQ14191 1432 aaPredicted RBP eCLIP20.25■□□□□ 0.83
SPHK2-208ENST00000599029 MYT1Q01538 1121 aa20.24■□□□□ 0.83
SPHK2-208ENST00000599029 RUSC2Q8N2Y8 1516 aa20.23■□□□□ 0.83
SPHK2-208ENST00000599029 HMGXB3Q12766 1538 aa20.17■□□□□ 0.82
SPHK2-208ENST00000599029 CC2D2AQ9P2K1 1620 aa20.16■□□□□ 0.82
SPHK2-208ENST00000599029 SYNJ1O43426 1573 aa20.15■□□□□ 0.82
SPHK2-208ENST00000599029 CSRNP3Q8WYN3 585 aa20.11■□□□□ 0.81
SPHK2-208ENST00000599029 UBTFP17480 764 aaKnown RBP20.1■□□□□ 0.81
SPHK2-208ENST00000599029 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
SPHK2-208ENST00000599029 TTBK1Q5TCY1 1321 aaPredicted RBP20.08■□□□□ 0.81
SPHK2-208ENST00000599029 DNAJC5BQ9UF47 199 aa20.06■□□□□ 0.8
SPHK2-208ENST00000599029 RANGAP1P46060 587 aaPredicted RBP20.04■□□□□ 0.8
SPHK2-208ENST00000599029 CFTRP13569 1480 aa19.98■□□□□ 0.79
SPHK2-208ENST00000599029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.94■□□□□ 0.78
SPHK2-208ENST00000599029 CADPSQ9ULU8 1353 aa19.93■□□□□ 0.78
SPHK2-208ENST00000599029 CCER1Q8TC90 406 aaPredicted RBP19.93■□□□□ 0.78
SPHK2-208ENST00000599029 CUX1P39880 1505 aa19.89■□□□□ 0.77
SPHK2-208ENST00000599029 EEA1Q15075 1411 aa19.88■□□□□ 0.77
SPHK2-208ENST00000599029 TOP2BQ02880 1626 aa19.88■□□□□ 0.77
SPHK2-208ENST00000599029 NESP48681 1621 aa19.87■□□□□ 0.77
SPHK2-208ENST00000599029 CEP162Q5TB80 1403 aa19.86■□□□□ 0.77
SPHK2-208ENST00000599029 GOLGA3Q08378 1498 aa19.81■□□□□ 0.76
SPHK2-208ENST00000599029 TNIKQ9UKE5 1360 aa19.8■□□□□ 0.76
SPHK2-208ENST00000599029 RAPGEF2Q9Y4G8 1499 aa19.78■□□□□ 0.76
SPHK2-208ENST00000599029 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.76
SPHK2-208ENST00000599029 ACIN1Q9UKV3 1341 aaKnown RBP19.76■□□□□ 0.75
SPHK2-208ENST00000599029 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
SPHK2-208ENST00000599029 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
SPHK2-208ENST00000599029 NEUROD1Q13562 356 aa19.72■□□□□ 0.75
SPHK2-208ENST00000599029 DIEXFQ68CQ4 756 aaKnown RBP19.71■□□□□ 0.75
SPHK2-208ENST00000599029 KIF27Q86VH2 1401 aa19.67■□□□□ 0.74
SPHK2-208ENST00000599029 CUX2O14529 1486 aa19.66■□□□□ 0.74
SPHK2-208ENST00000599029 FGD5Q6ZNL6 1462 aa19.66■□□□□ 0.74
SPHK2-208ENST00000599029 CENPBP07199 599 aaPredicted RBP19.66■□□□□ 0.74
SPHK2-208ENST00000599029 PRDM2Q13029 1718 aa19.64■□□□□ 0.73
SPHK2-208ENST00000599029 KIF21BO75037 1637 aa19.63■□□□□ 0.73
SPHK2-208ENST00000599029 CLIP1P30622 1438 aa19.63■□□□□ 0.73
SPHK2-208ENST00000599029 GTF3C3Q9Y5Q9 886 aa19.62■□□□□ 0.73
SPHK2-208ENST00000599029 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
SPHK2-208ENST00000599029 PRXQ9BXM0 1461 aa19.55■□□□□ 0.72
SPHK2-208ENST00000599029 IGF1RP08069 1367 aa19.53■□□□□ 0.72
SPHK2-208ENST00000599029 TOPBP1Q92547 1522 aa19.52■□□□□ 0.72
SPHK2-208ENST00000599029 POLA1P09884 1462 aaPredicted RBP19.49■□□□□ 0.71
SPHK2-208ENST00000599029 LAMC3Q9Y6N6 1575 aa19.49■□□□□ 0.71
SPHK2-208ENST00000599029 URB2Q14146 1524 aaKnown RBP19.48■□□□□ 0.71
SPHK2-208ENST00000599029 APLP2Q06481 763 aa19.47■□□□□ 0.71
SPHK2-208ENST00000599029 PDS5BQ9NTI5 1447 aa19.47■□□□□ 0.71
SPHK2-208ENST00000599029 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
SPHK2-208ENST00000599029 CARMIL1Q5VZK9 1371 aa19.46■□□□□ 0.71
SPHK2-208ENST00000599029 TDRD9Q8NDG6 1382 aaKnown RBP19.45■□□□□ 0.7
SPHK2-208ENST00000599029 P3H3Q8IVL6 736 aa19.43■□□□□ 0.7
SPHK2-208ENST00000599029 ERICH3Q5RHP9 1530 aa19.42■□□□□ 0.7
SPHK2-208ENST00000599029 KIF21AQ7Z4S6 1674 aa19.41■□□□□ 0.7
SPHK2-208ENST00000599029 VPS8Q8N3P4 1428 aa19.41■□□□□ 0.7
SPHK2-208ENST00000599029 ZNF316A6NFI3 1004 aaPredicted RBP19.4■□□□□ 0.7
SPHK2-208ENST00000599029 YTHDC1Q96MU7 727 aaKnown RBP19.4■□□□□ 0.7
SPHK2-208ENST00000599029 ARAP1Q96P48 1450 aa19.34■□□□□ 0.69
SPHK2-208ENST00000599029 HNRNPUL2Q1KMD3 747 aaKnown RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms