RNA–Protein interactions for RNA: ENST00000598880.5

ZNF544-212, Transcript of zinc finger protein 544, humanhuman

TSL 5

Gene ZNF544, Length 570 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-212ENST00000598880 AEBP2Q6ZN18 517 aaPredicted RBP27.49■■□□□ 1.99
ZNF544-212ENST00000598880 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
ZNF544-212ENST00000598880 SENP3Q9H4L4 574 aaPredicted RBP23.56■■□□□ 1.36
ZNF544-212ENST00000598880 NISCHQ9Y2I1 1504 aa23.35■■□□□ 1.33
ZNF544-212ENST00000598880 PHF23Q9BUL5 403 aaPredicted RBP23.31■■□□□ 1.32
ZNF544-212ENST00000598880 FOXD1Q16676 465 aa21.79■■□□□ 1.08
ZNF544-212ENST00000598880 PLPPR3Q6T4P5 718 aa21.57■■□□□ 1.04
ZNF544-212ENST00000598880 CCDC180Q9P1Z9 1646 aa20.75■□□□□ 0.91
ZNF544-212ENST00000598880 PPP6R1Q9UPN7 881 aa20.66■□□□□ 0.9
ZNF544-212ENST00000598880 ADRA2BP18089 450 aa20.65■□□□□ 0.9
ZNF544-212ENST00000598880 PIAS4Q8N2W9 510 aaPredicted RBP20.53■□□□□ 0.88
ZNF544-212ENST00000598880 ABCC9O60706 1549 aa20.43■□□□□ 0.86
ZNF544-212ENST00000598880 MSH5O43196 834 aa20.37■□□□□ 0.85
ZNF544-212ENST00000598880 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
ZNF544-212ENST00000598880 RB1CC1Q8TDY2 1594 aa19.59■□□□□ 0.73
ZNF544-212ENST00000598880 NACADO15069 1562 aa19.56■□□□□ 0.72
ZNF544-212ENST00000598880 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
ZNF544-212ENST00000598880 MYO15BQ96JP2 1530 aa19.41■□□□□ 0.7
ZNF544-212ENST00000598880 DCAF1Q9Y4B6 1507 aa19.3■□□□□ 0.68
ZNF544-212ENST00000598880 UNC13AQ9UPW8 1703 aa19.15■□□□□ 0.66
ZNF544-212ENST00000598880 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
ZNF544-212ENST00000598880 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
ZNF544-212ENST00000598880 BICRAQ9NZM4 1560 aa19.03■□□□□ 0.64
ZNF544-212ENST00000598880 POTEDQ86YR6 584 aa18.98■□□□□ 0.63
ZNF544-212ENST00000598880 SCRIBQ14160 1630 aa18.93■□□□□ 0.62
ZNF544-212ENST00000598880 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
ZNF544-212ENST00000598880 PPP4R3CPQ6ZMV5 832 aa18.91■□□□□ 0.62
ZNF544-212ENST00000598880 MAPK8IP2Q13387 824 aaPredicted RBP18.8■□□□□ 0.6
ZNF544-212ENST00000598880 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.6
ZNF544-212ENST00000598880 DMRT2Q9Y5R5 561 aa18.71■□□□□ 0.59
ZNF544-212ENST00000598880 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
ZNF544-212ENST00000598880 CNKSR2Q8WXI2 1034 aa18.5■□□□□ 0.55
ZNF544-212ENST00000598880 CC2D2AQ9P2K1 1620 aa18.48■□□□□ 0.55
ZNF544-212ENST00000598880 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
ZNF544-212ENST00000598880 CECR2Q9BXF3 1484 aa18.37■□□□□ 0.53
ZNF544-212ENST00000598880 RNF216Q9NWF9 866 aaPredicted RBP18.22■□□□□ 0.51
ZNF544-212ENST00000598880 HOXD11P31277 338 aaPredicted RBP18.2■□□□□ 0.5
ZNF544-212ENST00000598880 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
ZNF544-212ENST00000598880 NCAPD3P42695 1498 aa18.08■□□□□ 0.49
ZNF544-212ENST00000598880 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.48
ZNF544-212ENST00000598880 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
ZNF544-212ENST00000598880 KCNA4P22459 653 aa18.04■□□□□ 0.48
ZNF544-212ENST00000598880 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.48
ZNF544-212ENST00000598880 SMARCA2P51531 1590 aa18.01■□□□□ 0.47
ZNF544-212ENST00000598880 MROH2BQ7Z745 1585 aa18■□□□□ 0.47
ZNF544-212ENST00000598880 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
ZNF544-212ENST00000598880 HMGXB3Q12766 1538 aa17.94■□□□□ 0.46
ZNF544-212ENST00000598880 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
ZNF544-212ENST00000598880 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
ZNF544-212ENST00000598880 WIZO95785 1651 aa17.8■□□□□ 0.44
ZNF544-212ENST00000598880 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
ZNF544-212ENST00000598880 NESP48681 1621 aa17.67■□□□□ 0.42
ZNF544-212ENST00000598880 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
ZNF544-212ENST00000598880 LAMC3Q9Y6N6 1575 aa17.57■□□□□ 0.4
ZNF544-212ENST00000598880 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
ZNF544-212ENST00000598880 CADPSQ9ULU8 1353 aa17.55■□□□□ 0.4
ZNF544-212ENST00000598880 PDS5BQ9NTI5 1447 aa17.48■□□□□ 0.39
ZNF544-212ENST00000598880 CUX2O14529 1486 aa17.44■□□□□ 0.38
ZNF544-212ENST00000598880 CCDC88BA6NC98 1476 aa17.42■□□□□ 0.38
ZNF544-212ENST00000598880 CFTRP13569 1480 aa17.42■□□□□ 0.38
ZNF544-212ENST00000598880 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
ZNF544-212ENST00000598880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.39■□□□□ 0.37
ZNF544-212ENST00000598880 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
ZNF544-212ENST00000598880 RNF39Q9H2S5 420 aa17.34■□□□□ 0.37
ZNF544-212ENST00000598880 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.37
ZNF544-212ENST00000598880 MRC2Q9UBG0 1479 aa17.3■□□□□ 0.36
ZNF544-212ENST00000598880 CEP164Q9UPV0 1460 aa17.3■□□□□ 0.36
ZNF544-212ENST00000598880 SUPT5HO00267 1087 aaKnown RBP17.28■□□□□ 0.36
ZNF544-212ENST00000598880 WDR62O43379 1518 aa17.24■□□□□ 0.35
ZNF544-212ENST00000598880 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
ZNF544-212ENST00000598880 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
ZNF544-212ENST00000598880 C1QBPQ07021 282 aaKnown RBP17.19■□□□□ 0.34
ZNF544-212ENST00000598880 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
ZNF544-212ENST00000598880 CACNB1Q02641 598 aaPredicted RBP17.16■□□□□ 0.34
ZNF544-212ENST00000598880 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
ZNF544-212ENST00000598880 SLC4A2P04920 1241 aa17.05■□□□□ 0.32
ZNF544-212ENST00000598880 TOPBP1Q92547 1522 aa17.04■□□□□ 0.32
ZNF544-212ENST00000598880 ABCC8Q09428 1581 aa17.02■□□□□ 0.32
ZNF544-212ENST00000598880 DNMBPQ6XZF7 1577 aa16.99■□□□□ 0.31
ZNF544-212ENST00000598880 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
ZNF544-212ENST00000598880 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
ZNF544-212ENST00000598880 ZNF608Q9ULD9 1512 aaPredicted RBP16.91■□□□□ 0.3
ZNF544-212ENST00000598880 POLA1P09884 1462 aaPredicted RBP16.89■□□□□ 0.29
ZNF544-212ENST00000598880 CUX1P39880 1505 aa16.89■□□□□ 0.29
ZNF544-212ENST00000598880 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
ZNF544-212ENST00000598880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.85■□□□□ 0.29
ZNF544-212ENST00000598880 HNRNPUL2Q1KMD3 747 aaKnown RBP16.85■□□□□ 0.29
ZNF544-212ENST00000598880 SOGA1O94964 1423 aa16.85■□□□□ 0.29
ZNF544-212ENST00000598880 RAD54L2Q9Y4B4 1467 aa16.85■□□□□ 0.29
ZNF544-212ENST00000598880 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.28
ZNF544-212ENST00000598880 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.286e-7■■■■■ 28.4
ZNF544-212ENST00000598880 APLP2Q06481 763 aa16.8■□□□□ 0.28
ZNF544-212ENST00000598880 FOXD4L1Q9NU39 408 aa16.79■□□□□ 0.28
ZNF544-212ENST00000598880 EIF4G3O43432 1585 aaKnown RBP16.78■□□□□ 0.28
ZNF544-212ENST00000598880 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.28
ZNF544-212ENST00000598880 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
ZNF544-212ENST00000598880 MYCNP04198 464 aaPredicted RBP16.75■□□□□ 0.27
ZNF544-212ENST00000598880 WRNQ14191 1432 aaPredicted RBP eCLIP16.75■□□□□ 0.279e-6■■■■■ 50.1
ZNF544-212ENST00000598880 SAMD1Q6SPF0 538 aaPredicted RBP16.73■□□□□ 0.27
ZNF544-212ENST00000598880 TOP2BQ02880 1626 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms