RNA–Protein interactions for RNA: ENST00000598707.5

ECH1-211, Transcript of enoyl-CoA hydratase 1, humanhuman

TSL 2

Gene ECH1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1-211ENST00000598707 NISCHQ9Y2I1 1504 aa42.39■■■■■ 4.38
ECH1-211ENST00000598707 CCDC180Q9P1Z9 1646 aa37.83■■■■□ 3.65
ECH1-211ENST00000598707 ABCC9O60706 1549 aa37.4■■■■□ 3.58
ECH1-211ENST00000598707 RB1CC1Q8TDY2 1594 aa35.76■■■■□ 3.31
ECH1-211ENST00000598707 NACADO15069 1562 aa35.61■■■■□ 3.29
ECH1-211ENST00000598707 DCAF8L2P0C7V8 631 aa35.56■■■■□ 3.28
ECH1-211ENST00000598707 ZCCHC6Q5VYS8 1495 aaKnown RBP35.24■■■■□ 3.23
ECH1-211ENST00000598707 MYO15BQ96JP2 1530 aa35.24■■■■□ 3.23
ECH1-211ENST00000598707 UNC13AQ9UPW8 1703 aa35.08■■■■□ 3.21
ECH1-211ENST00000598707 DCAF1Q9Y4B6 1507 aa35■■■■□ 3.19
ECH1-211ENST00000598707 PABPN1Q86U42 306 aaKnown RBP eCLIP34.88■■■■□ 3.17
ECH1-211ENST00000598707 BICRAQ9NZM4 1560 aa34.77■■■■□ 3.16
ECH1-211ENST00000598707 DNAJC5BQ9UF47 199 aa34.65■■■■□ 3.14
ECH1-211ENST00000598707 SCRIBQ14160 1630 aa34.57■■■■□ 3.12
ECH1-211ENST00000598707 SHROOM4Q9ULL8 1493 aa34.21■■■■□ 3.07
ECH1-211ENST00000598707 EIF4G1Q04637 1599 aaKnown RBP33.84■■■■□ 3.01
ECH1-211ENST00000598707 CC2D2AQ9P2K1 1620 aa33.81■■■■□ 3
ECH1-211ENST00000598707 CECR2Q9BXF3 1484 aa33.6■■■□□ 2.97
ECH1-211ENST00000598707 SMARCA4P51532 1647 aa32.99■■■□□ 2.87
ECH1-211ENST00000598707 ATAD2BQ9ULI0 1458 aa32.86■■■□□ 2.85
ECH1-211ENST00000598707 NCAPD3P42695 1498 aa32.86■■■□□ 2.85
ECH1-211ENST00000598707 BAZ1AQ9NRL2 1556 aaPredicted RBP32.85■■■□□ 2.85
ECH1-211ENST00000598707 SMARCA2P51531 1590 aa32.78■■■□□ 2.84
ECH1-211ENST00000598707 MROH2BQ7Z745 1585 aa32.71■■■□□ 2.83
ECH1-211ENST00000598707 HMGXB3Q12766 1538 aa32.68■■■□□ 2.82
ECH1-211ENST00000598707 PEG3Q9GZU2 1588 aa32.63■■■□□ 2.81
ECH1-211ENST00000598707 BAZ1BQ9UIG0 1483 aaKnown RBP32.57■■■□□ 2.8
ECH1-211ENST00000598707 WIZO95785 1651 aa32.37■■■□□ 2.77
ECH1-211ENST00000598707 NESP48681 1621 aa32.29■■■□□ 2.76
ECH1-211ENST00000598707 ERCC6Q03468 1493 aa32.21■■■□□ 2.75
ECH1-211ENST00000598707 RSF1Q96T23 1441 aaPredicted RBP32.17■■■□□ 2.74
ECH1-211ENST00000598707 LAMC3Q9Y6N6 1575 aa32.07■■■□□ 2.72
ECH1-211ENST00000598707 CUX2O14529 1486 aa31.95■■■□□ 2.7
ECH1-211ENST00000598707 TOP2AP11388 1531 aaKnown RBP31.94■■■□□ 2.7
ECH1-211ENST00000598707 KIF21AQ7Z4S6 1674 aa31.92■■■□□ 2.7
ECH1-211ENST00000598707 CADPSQ9ULU8 1353 aa31.89■■■□□ 2.7
ECH1-211ENST00000598707 THOC2Q8NI27 1593 aaKnown RBP31.85■■■□□ 2.69
ECH1-211ENST00000598707 PDS5BQ9NTI5 1447 aa31.83■■■□□ 2.69
ECH1-211ENST00000598707 CFTRP13569 1480 aa31.65■■■□□ 2.66
ECH1-211ENST00000598707 CCDC88BA6NC98 1476 aa31.58■■■□□ 2.65
ECH1-211ENST00000598707 MRC2Q9UBG0 1479 aa31.57■■■□□ 2.64
ECH1-211ENST00000598707 FANCD2Q9BXW9 1451 aa31.56■■■□□ 2.64
ECH1-211ENST00000598707 CEP164Q9UPV0 1460 aa31.54■■■□□ 2.64
ECH1-211ENST00000598707 WDR62O43379 1518 aa31.49■■■□□ 2.63
ECH1-211ENST00000598707 PRDM2Q13029 1718 aa31.45■■■□□ 2.63
ECH1-211ENST00000598707 DNAJC5Q9H3Z4 198 aa31.38■■■□□ 2.61
ECH1-211ENST00000598707 URB2Q14146 1524 aaKnown RBP31.31■■■□□ 2.6
ECH1-211ENST00000598707 SUPT5HO00267 1087 aaKnown RBP31.13■■■□□ 2.57
ECH1-211ENST00000598707 TOPBP1Q92547 1522 aa31.03■■■□□ 2.56
ECH1-211ENST00000598707 DNMBPQ6XZF7 1577 aa30.96■■■□□ 2.55
ECH1-211ENST00000598707 ABCC8Q09428 1581 aa30.91■■■□□ 2.54
ECH1-211ENST00000598707 IFT140Q96RY7 1462 aa30.87■■■□□ 2.53
ECH1-211ENST00000598707 ZNF608Q9ULD9 1512 aaPredicted RBP30.85■■■□□ 2.53
ECH1-211ENST00000598707 POLA1P09884 1462 aaPredicted RBP30.75■■■□□ 2.51
ECH1-211ENST00000598707 TARBP1Q13395 1621 aaKnown RBP30.74■■■□□ 2.51
ECH1-211ENST00000598707 EIF4G3O43432 1585 aaKnown RBP30.71■■■□□ 2.51
ECH1-211ENST00000598707 CUX1P39880 1505 aa30.71■■■□□ 2.51
ECH1-211ENST00000598707 RAD54L2Q9Y4B4 1467 aa30.65■■■□□ 2.5
ECH1-211ENST00000598707 FGD5Q6ZNL6 1462 aa30.63■■■□□ 2.49
ECH1-211ENST00000598707 AQRO60306 1485 aaKnown RBP eCLIP30.61■■■□□ 2.496e-8■■■■■ 66.5
ECH1-211ENST00000598707 SOGA1O94964 1423 aa30.58■■■□□ 2.49
ECH1-211ENST00000598707 OSCARQ8IYS5 282 aa30.55■■■□□ 2.48
ECH1-211ENST00000598707 TDRD9Q8NDG6 1382 aaKnown RBP30.49■■■□□ 2.47
ECH1-211ENST00000598707 WDR97A6NE52 1622 aa30.44■■■□□ 2.46
ECH1-211ENST00000598707 CHD1O14646 1710 aa30.42■■■□□ 2.46
ECH1-211ENST00000598707 SYNJ1O43426 1573 aa30.35■■■□□ 2.45
ECH1-211ENST00000598707 BIVM-ERCC5R4GMW8 1640 aa30.33■■■□□ 2.45
ECH1-211ENST00000598707 WRNQ14191 1432 aaPredicted RBP eCLIP30.32■■■□□ 2.44
ECH1-211ENST00000598707 TOP2BQ02880 1626 aa30.32■■■□□ 2.44
ECH1-211ENST00000598707 SNAPC4Q5SXM2 1469 aa30.31■■■□□ 2.44
ECH1-211ENST00000598707 ABCA10Q8WWZ4 1543 aa30.28■■■□□ 2.44
ECH1-211ENST00000598707 FBLN2P98095 1184 aa30.28■■■□□ 2.44
ECH1-211ENST00000598707 PBRM1Q86U86 1689 aa30.27■■■□□ 2.44
ECH1-211ENST00000598707 GRIN2BQ13224 1484 aa30.26■■■□□ 2.44
ECH1-211ENST00000598707 TRIM41Q8WV44 630 aa30.26■■■□□ 2.43
ECH1-211ENST00000598707 ABCA5Q8WWZ7 1642 aa30.24■■■□□ 2.43
ECH1-211ENST00000598707 GAPVD1Q14C86 1478 aa30.23■■■□□ 2.43
ECH1-211ENST00000598707 RIMBP3CA6NJZ7 1639 aa30.22■■■□□ 2.43
ECH1-211ENST00000598707 RIMBP3BA6NNM3 1639 aa30.22■■■□□ 2.43
ECH1-211ENST00000598707 RIMBP3Q9UFD9 1639 aa30.22■■■□□ 2.43
ECH1-211ENST00000598707 MAGI1Q96QZ7 1491 aaPredicted RBP30.2■■■□□ 2.43
ECH1-211ENST00000598707 ARHGEF11O15085 1522 aa30.14■■■□□ 2.42
ECH1-211ENST00000598707 SYNJ2O15056 1496 aa30.11■■■□□ 2.41
ECH1-211ENST00000598707 CHMP7Q8WUX9 453 aaPredicted RBP30.1■■■□□ 2.41
ECH1-211ENST00000598707 CLASP1Q7Z460 1538 aa30.03■■■□□ 2.4
ECH1-211ENST00000598707 ADAMTS12P58397 1594 aa29.98■■■□□ 2.39
ECH1-211ENST00000598707 ERICH3Q5RHP9 1530 aa29.91■■■□□ 2.38
ECH1-211ENST00000598707 GRIN2AQ12879 1464 aa29.89■■■□□ 2.38
ECH1-211ENST00000598707 ARAP1Q96P48 1450 aa29.89■■■□□ 2.38
ECH1-211ENST00000598707 CYB5RLQ6IPT4 315 aa29.85■■■□□ 2.37
ECH1-211ENST00000598707 FHAD1B1AJZ9 1412 aa29.85■■■□□ 2.37
ECH1-211ENST00000598707 CEP170Q5SW79 1584 aa29.81■■■□□ 2.36
ECH1-211ENST00000598707 NUP160Q12769 1436 aa29.76■■■□□ 2.35
ECH1-211ENST00000598707 KIF27Q86VH2 1401 aa29.69■■■□□ 2.34
ECH1-211ENST00000598707 ERCC6L2Q5T890 1561 aa29.66■■■□□ 2.34
ECH1-211ENST00000598707 IGF1RP08069 1367 aa29.64■■■□□ 2.33
ECH1-211ENST00000598707 SHROOM2Q13796 1616 aa29.61■■■□□ 2.33
ECH1-211ENST00000598707 CUL7Q14999 1698 aa29.59■■■□□ 2.33
ECH1-211ENST00000598707 RUSC2Q8N2Y8 1516 aa29.55■■■□□ 2.32
ECH1-211ENST00000598707 CARMIL1Q5VZK9 1371 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms