RNA–Protein interactions for RNA: ENST00000598707.5

ECH1-211, Transcript of enoyl-CoA hydratase 1, humanhuman

TSL 2

Gene ECH1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1-211ENST00000598707 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.33■□□□□ 0.522e-15■■■■■ 372.6
ECH1-211ENST00000598707 PCBP2Q15366 365 aaKnown RBP eCLIP16.04■□□□□ 0.161e-9■■■■■ 153.4
ECH1-211ENST00000598707 HNRNPKP61978 463 aaKnown RBP eCLIP17.26■□□□□ 0.357e-25■■■■■ 81.5
ECH1-211ENST00000598707 AQRO60306 1485 aaKnown RBP eCLIP30.61■■■□□ 2.496e-8■■■■■ 66.5
ECH1-211ENST00000598707 PCBP1Q15365 356 aaKnown RBP eCLIP18.99■□□□□ 0.639e-10■■■■■ 59.4
ECH1-211ENST00000598707 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.48■□□□□ 0.714e-10■■■■■ 54.7
ECH1-211ENST00000598707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.34■■□□□ 1.815e-6■■■■■ 46.2
ECH1-211ENST00000598707 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.47■□□□□ 0.073e-33■■■■■ 42.8
ECH1-211ENST00000598707 EFTUD2Q15029 972 aaKnown RBP eCLIP16.26■□□□□ 0.194e-8■■■■■ 42.6
ECH1-211ENST00000598707 SF3A3Q12874 501 aaKnown RBP eCLIP15.16■□□□□ 0.025e-6■■■■■ 39.5
ECH1-211ENST00000598707 RPS3P23396 243 aaKnown RBP eCLIP16.59■□□□□ 0.251e-7■■■■□ 26.5
ECH1-211ENST00000598707 RBM22Q9NW64 420 aaKnown RBP eCLIP17.21■□□□□ 0.354e-6■■■■□ 24.3
ECH1-211ENST00000598707 RBFOX2O43251 390 aaKnown RBP eCLIP13.11□□□□□ -0.317e-7■■■■□ 21.8
ECH1-211ENST00000598707 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.9■□□□□ 0.941e-10■■■■□ 20.8
ECH1-211ENST00000598707 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.77■□□□□ 0.768e-7■■■■□ 19.5
ECH1-211ENST00000598707 DDX3XO00571 662 aaKnown RBP eCLIP17.55■□□□□ 0.41e-21■■■□□ 19.2
ECH1-211ENST00000598707 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.85■□□□□ 0.135e-8■■■□□ 19.2
ECH1-211ENST00000598707 LARP4Q71RC2 724 aaKnown RBP eCLIP15.66■□□□□ 0.14e-6■■■□□ 18.9
ECH1-211ENST00000598707 ILF3Q12906 894 aaKnown RBP eCLIP17.05■□□□□ 0.322e-12■■■□□ 17.1
ECH1-211ENST00000598707 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.1■□□□□ 0.179e-17■■■□□ 16.7
ECH1-211ENST00000598707 FMR1Q06787 632 aaKnown RBP eCLIP21.75■■□□□ 1.073e-7■■■□□ 15.5
ECH1-211ENST00000598707 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.73□□□□□ -0.059e-8■■■□□ 14.8
ECH1-211ENST00000598707 PRPF4O43172 522 aaKnown RBP eCLIP16.27■□□□□ 0.22e-7■■□□□ 13.9
ECH1-211ENST00000598707 G3BP1Q13283 466 aaKnown RBP eCLIP21.23■□□□□ 0.998e-7■■□□□ 13.3
ECH1-211ENST00000598707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.98■■■□□ 2.072e-6■■□□□ 11.5
ECH1-211ENST00000598707 YBX3P16989 372 aaKnown RBP eCLIP22.83■■□□□ 1.259e-10■■□□□ 11.4
ECH1-211ENST00000598707 QKIQ96PU8 341 aaKnown RBP eCLIP17.06■□□□□ 0.322e-10■□□□□ 11.3
ECH1-211ENST00000598707 PPIGQ13427 754 aaKnown RBP eCLIP19.75■□□□□ 0.753e-8■□□□□ 9.9
ECH1-211ENST00000598707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.46■■□□□ 1.832e-7■□□□□ 9.4
Retrieved 29 of 29 RNA–protein pairs in 18.1 ms