RNA–Protein interactions for RNA: ENST00000598038.5

GTPBP3-216, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 5

Gene GTPBP3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-216ENST00000598038 NISCHQ9Y2I1 1504 aa34.44■■■■□ 3.1
GTPBP3-216ENST00000598038 CCDC180Q9P1Z9 1646 aa29.77■■■□□ 2.36
GTPBP3-216ENST00000598038 DCAF8L2P0C7V8 631 aa29.36■■■□□ 2.29
GTPBP3-216ENST00000598038 ABCC9O60706 1549 aa29.08■■■□□ 2.25
GTPBP3-216ENST00000598038 ZCCHC6Q5VYS8 1495 aaKnown RBP28.85■■■□□ 2.21
GTPBP3-216ENST00000598038 SHROOM4Q9ULL8 1493 aa28.84■■■□□ 2.21
GTPBP3-216ENST00000598038 DCAF1Q9Y4B6 1507 aa28.05■■■□□ 2.08
GTPBP3-216ENST00000598038 SCRIBQ14160 1630 aa28■■■□□ 2.07
GTPBP3-216ENST00000598038 NACADO15069 1562 aa27.86■■■□□ 2.05
GTPBP3-216ENST00000598038 RB1CC1Q8TDY2 1594 aa27.77■■■□□ 2.04
GTPBP3-216ENST00000598038 MYO15BQ96JP2 1530 aa27.68■■■□□ 2.02
GTPBP3-216ENST00000598038 PABPN1Q86U42 306 aaKnown RBP eCLIP27.61■■■□□ 2.01
GTPBP3-216ENST00000598038 SUPT5HO00267 1087 aaKnown RBP27.6■■■□□ 2.01
GTPBP3-216ENST00000598038 UNC13AQ9UPW8 1703 aa27.37■■□□□ 1.97
GTPBP3-216ENST00000598038 CECR2Q9BXF3 1484 aa27.12■■□□□ 1.93
GTPBP3-216ENST00000598038 BICRAQ9NZM4 1560 aa27.09■■□□□ 1.93
GTPBP3-216ENST00000598038 MROH2BQ7Z745 1585 aa26.83■■□□□ 1.88
GTPBP3-216ENST00000598038 RSF1Q96T23 1441 aaPredicted RBP26.81■■□□□ 1.88
GTPBP3-216ENST00000598038 WIZO95785 1651 aa26.63■■□□□ 1.85
GTPBP3-216ENST00000598038 BAZ1AQ9NRL2 1556 aaPredicted RBP26.53■■□□□ 1.84
GTPBP3-216ENST00000598038 SMARCA4P51532 1647 aa26.53■■□□□ 1.84
GTPBP3-216ENST00000598038 EIF4G1Q04637 1599 aaKnown RBP26.31■■□□□ 1.8
GTPBP3-216ENST00000598038 ATAD2BQ9ULI0 1458 aa26.18■■□□□ 1.78
GTPBP3-216ENST00000598038 BAZ1BQ9UIG0 1483 aaKnown RBP26.07■■□□□ 1.76
GTPBP3-216ENST00000598038 TOP2AP11388 1531 aaKnown RBP26.06■■□□□ 1.76
GTPBP3-216ENST00000598038 DNAJC5BQ9UF47 199 aa26.04■■□□□ 1.76
GTPBP3-216ENST00000598038 CC2D2AQ9P2K1 1620 aa26.04■■□□□ 1.76
GTPBP3-216ENST00000598038 CCDC88BA6NC98 1476 aa26.01■■□□□ 1.75
GTPBP3-216ENST00000598038 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
GTPBP3-216ENST00000598038 SMARCA2P51531 1590 aa25.97■■□□□ 1.75
GTPBP3-216ENST00000598038 PEG3Q9GZU2 1588 aa25.92■■□□□ 1.74
GTPBP3-216ENST00000598038 NCAPD3P42695 1498 aa25.81■■□□□ 1.72
GTPBP3-216ENST00000598038 HMGXB3Q12766 1538 aa25.67■■□□□ 1.7
GTPBP3-216ENST00000598038 EHMT2Q96KQ7 1210 aa25.66■■□□□ 1.7
GTPBP3-216ENST00000598038 ABCC8Q09428 1581 aa25.65■■□□□ 1.7
GTPBP3-216ENST00000598038 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
GTPBP3-216ENST00000598038 FAM9AQ8IZU1 332 aaPredicted RBP25.64■■□□□ 1.69
GTPBP3-216ENST00000598038 NESP48681 1621 aa25.49■■□□□ 1.67
GTPBP3-216ENST00000598038 PPARGC1BQ86YN6 1023 aaKnown RBP25.38■■□□□ 1.65
GTPBP3-216ENST00000598038 LOC105371045A0A1W2PR82 267 aa25.35■■□□□ 1.65
GTPBP3-216ENST00000598038 CADPSQ9ULU8 1353 aa25.3■■□□□ 1.64
GTPBP3-216ENST00000598038 CFTRP13569 1480 aa25.27■■□□□ 1.64
GTPBP3-216ENST00000598038 HRCP23327 699 aa25.25■■□□□ 1.63
GTPBP3-216ENST00000598038 WRNQ14191 1432 aaPredicted RBP eCLIP25.24■■□□□ 1.63
GTPBP3-216ENST00000598038 SYNJ1O43426 1573 aa25.21■■□□□ 1.63
GTPBP3-216ENST00000598038 SOGA1O94964 1423 aa25.11■■□□□ 1.61
GTPBP3-216ENST00000598038 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
GTPBP3-216ENST00000598038 RUSC2Q8N2Y8 1516 aa25.1■■□□□ 1.61
GTPBP3-216ENST00000598038 CUX1P39880 1505 aa25.04■■□□□ 1.6
GTPBP3-216ENST00000598038 KIF21AQ7Z4S6 1674 aa24.94■■□□□ 1.58
GTPBP3-216ENST00000598038 PCGF6Q9BYE7 350 aa24.93■■□□□ 1.58
GTPBP3-216ENST00000598038 LAMC3Q9Y6N6 1575 aa24.92■■□□□ 1.58
GTPBP3-216ENST00000598038 PELP1Q8IZL8 1130 aaKnown RBP24.92■■□□□ 1.58
GTPBP3-216ENST00000598038 CEP164Q9UPV0 1460 aa24.91■■□□□ 1.58
GTPBP3-216ENST00000598038 PRDM2Q13029 1718 aa24.9■■□□□ 1.58
GTPBP3-216ENST00000598038 TOP2BQ02880 1626 aa24.88■■□□□ 1.57
GTPBP3-216ENST00000598038 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
GTPBP3-216ENST00000598038 RANGAP1P46060 587 aaPredicted RBP24.84■■□□□ 1.57
GTPBP3-216ENST00000598038 URB2Q14146 1524 aaKnown RBP24.83■■□□□ 1.57
GTPBP3-216ENST00000598038 ERCC6Q03468 1493 aa24.83■■□□□ 1.56
GTPBP3-216ENST00000598038 FGD5Q6ZNL6 1462 aa24.82■■□□□ 1.56
GTPBP3-216ENST00000598038 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
GTPBP3-216ENST00000598038 BIVM-ERCC5R4GMW8 1640 aa24.78■■□□□ 1.56
GTPBP3-216ENST00000598038 TOPBP1Q92547 1522 aa24.77■■□□□ 1.56
GTPBP3-216ENST00000598038 CSRNP3Q8WYN3 585 aa24.75■■□□□ 1.55
GTPBP3-216ENST00000598038 CUX2O14529 1486 aa24.7■■□□□ 1.54
GTPBP3-216ENST00000598038 POLA1P09884 1462 aaPredicted RBP24.7■■□□□ 1.54
GTPBP3-216ENST00000598038 UBTFP17480 764 aaKnown RBP24.68■■□□□ 1.54
GTPBP3-216ENST00000598038 DNMBPQ6XZF7 1577 aa24.67■■□□□ 1.54
GTPBP3-216ENST00000598038 TDRD9Q8NDG6 1382 aaKnown RBP24.65■■□□□ 1.54
GTPBP3-216ENST00000598038 MRC2Q9UBG0 1479 aa24.58■■□□□ 1.53
GTPBP3-216ENST00000598038 KIF27Q86VH2 1401 aa24.53■■□□□ 1.52
GTPBP3-216ENST00000598038 RAPGEF2Q9Y4G8 1499 aa24.53■■□□□ 1.52
GTPBP3-216ENST00000598038 AQRO60306 1485 aaKnown RBP eCLIP24.47■■□□□ 1.519e-8■■■■■ 31.6
GTPBP3-216ENST00000598038 SCAF1Q9H7N4 1312 aaKnown RBP24.47■■□□□ 1.51
GTPBP3-216ENST00000598038 ZNF608Q9ULD9 1512 aaPredicted RBP24.45■■□□□ 1.5
GTPBP3-216ENST00000598038 TTBK1Q5TCY1 1321 aaPredicted RBP24.43■■□□□ 1.5
GTPBP3-216ENST00000598038 EEA1Q15075 1411 aa24.43■■□□□ 1.5
GTPBP3-216ENST00000598038 IGF1RP08069 1367 aa24.42■■□□□ 1.5
GTPBP3-216ENST00000598038 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
GTPBP3-216ENST00000598038 ABCA10Q8WWZ4 1543 aa24.37■■□□□ 1.49
GTPBP3-216ENST00000598038 GOLGA3Q08378 1498 aa24.37■■□□□ 1.49
GTPBP3-216ENST00000598038 WDR62O43379 1518 aa24.37■■□□□ 1.49
GTPBP3-216ENST00000598038 TARBP1Q13395 1621 aaKnown RBP24.33■■□□□ 1.48
GTPBP3-216ENST00000598038 CARMIL1Q5VZK9 1371 aa24.31■■□□□ 1.48
GTPBP3-216ENST00000598038 GAPVD1Q14C86 1478 aa24.31■■□□□ 1.48
GTPBP3-216ENST00000598038 CEP162Q5TB80 1403 aa24.3■■□□□ 1.48
GTPBP3-216ENST00000598038 FBLN2P98095 1184 aa24.29■■□□□ 1.48
GTPBP3-216ENST00000598038 PRXQ9BXM0 1461 aa24.28■■□□□ 1.48
GTPBP3-216ENST00000598038 WDR97A6NE52 1622 aa24.26■■□□□ 1.47
GTPBP3-216ENST00000598038 KIF21BO75037 1637 aa24.25■■□□□ 1.47
GTPBP3-216ENST00000598038 P3H3Q8IVL6 736 aa24.24■■□□□ 1.47
GTPBP3-216ENST00000598038 TNIKQ9UKE5 1360 aa24.22■■□□□ 1.47
GTPBP3-216ENST00000598038 ABCA5Q8WWZ7 1642 aa24.2■■□□□ 1.46
GTPBP3-216ENST00000598038 IFT140Q96RY7 1462 aa24.19■■□□□ 1.46
GTPBP3-216ENST00000598038 EIF4G3O43432 1585 aaKnown RBP24.15■■□□□ 1.46
GTPBP3-216ENST00000598038 CLIP1P30622 1438 aa24.12■■□□□ 1.45
GTPBP3-216ENST00000598038 MYT1Q01538 1121 aa24.11■■□□□ 1.45
GTPBP3-216ENST00000598038 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
GTPBP3-216ENST00000598038 PBRM1Q86U86 1689 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms