RNA–Protein interactions for RNA: ENST00000597063.6

STRN4-215, Transcript of striatin 4, humanhuman

TSL 4

Gene STRN4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-215ENST00000597063 NISCHQ9Y2I1 1504 aa44.09■■■■■ 4.65
STRN4-215ENST00000597063 CCDC180Q9P1Z9 1646 aa39.23■■■■□ 3.87
STRN4-215ENST00000597063 ABCC9O60706 1549 aa38.64■■■■□ 3.78
STRN4-215ENST00000597063 DCAF8L2P0C7V8 631 aa37.15■■■■□ 3.54
STRN4-215ENST00000597063 RB1CC1Q8TDY2 1594 aa37.04■■■■□ 3.52
STRN4-215ENST00000597063 NACADO15069 1562 aa36.92■■■■□ 3.5
STRN4-215ENST00000597063 ZCCHC6Q5VYS8 1495 aaKnown RBP36.66■■■■□ 3.46
STRN4-215ENST00000597063 MYO15BQ96JP2 1530 aa36.56■■■■□ 3.44
STRN4-215ENST00000597063 DCAF1Q9Y4B6 1507 aa36.39■■■■□ 3.42
STRN4-215ENST00000597063 UNC13AQ9UPW8 1703 aa36.24■■■■□ 3.39
STRN4-215ENST00000597063 PABPN1Q86U42 306 aaKnown RBP eCLIP36.14■■■■□ 3.38
STRN4-215ENST00000597063 SCRIBQ14160 1630 aa35.9■■■■□ 3.34
STRN4-215ENST00000597063 BICRAQ9NZM4 1560 aa35.89■■■■□ 3.34
STRN4-215ENST00000597063 DNAJC5BQ9UF47 199 aa35.59■■■■□ 3.29
STRN4-215ENST00000597063 SHROOM4Q9ULL8 1493 aa35.4■■■■□ 3.26
STRN4-215ENST00000597063 EIF4G1Q04637 1599 aaKnown RBP34.98■■■■□ 3.19
STRN4-215ENST00000597063 CC2D2AQ9P2K1 1620 aa34.91■■■■□ 3.18
STRN4-215ENST00000597063 CECR2Q9BXF3 1484 aa34.7■■■■□ 3.15
STRN4-215ENST00000597063 SMARCA4P51532 1647 aa34.26■■■■□ 3.07
STRN4-215ENST00000597063 BAZ1AQ9NRL2 1556 aaPredicted RBP34.19■■■■□ 3.06
STRN4-215ENST00000597063 ATAD2BQ9ULI0 1458 aa34.09■■■■□ 3.05
STRN4-215ENST00000597063 NCAPD3P42695 1498 aa34.06■■■■□ 3.04
STRN4-215ENST00000597063 SMARCA2P51531 1590 aa34.04■■■■□ 3.04
STRN4-215ENST00000597063 MROH2BQ7Z745 1585 aa34.01■■■■□ 3.03
STRN4-215ENST00000597063 HMGXB3Q12766 1538 aa33.87■■■■□ 3.01
STRN4-215ENST00000597063 BAZ1BQ9UIG0 1483 aaKnown RBP33.84■■■■□ 3.01
STRN4-215ENST00000597063 PEG3Q9GZU2 1588 aa33.84■■■■□ 3.01
STRN4-215ENST00000597063 WIZO95785 1651 aa33.68■■■□□ 2.98
STRN4-215ENST00000597063 RSF1Q96T23 1441 aaPredicted RBP33.55■■■□□ 2.96
STRN4-215ENST00000597063 NESP48681 1621 aa33.39■■■□□ 2.93
STRN4-215ENST00000597063 ERCC6Q03468 1493 aa33.33■■■□□ 2.93
STRN4-215ENST00000597063 TOP2AP11388 1531 aaKnown RBP33.24■■■□□ 2.91
STRN4-215ENST00000597063 LAMC3Q9Y6N6 1575 aa33.21■■■□□ 2.91
STRN4-215ENST00000597063 CADPSQ9ULU8 1353 aa33.1■■■□□ 2.89
STRN4-215ENST00000597063 PDS5BQ9NTI5 1447 aa33.02■■■□□ 2.88
STRN4-215ENST00000597063 KIF21AQ7Z4S6 1674 aa32.99■■■□□ 2.87
STRN4-215ENST00000597063 CUX2O14529 1486 aa32.92■■■□□ 2.86
STRN4-215ENST00000597063 CCDC88BA6NC98 1476 aa32.89■■■□□ 2.86
STRN4-215ENST00000597063 CFTRP13569 1480 aa32.85■■■□□ 2.85
STRN4-215ENST00000597063 THOC2Q8NI27 1593 aaKnown RBP32.83■■■□□ 2.85
STRN4-215ENST00000597063 SUPT5HO00267 1087 aaKnown RBP32.79■■■□□ 2.84
STRN4-215ENST00000597063 FANCD2Q9BXW9 1451 aa32.74■■■□□ 2.83
STRN4-215ENST00000597063 CEP164Q9UPV0 1460 aa32.72■■■□□ 2.83
STRN4-215ENST00000597063 MRC2Q9UBG0 1479 aa32.68■■■□□ 2.82
STRN4-215ENST00000597063 PRDM2Q13029 1718 aa32.63■■■□□ 2.81
STRN4-215ENST00000597063 WDR62O43379 1518 aa32.54■■■□□ 2.8
STRN4-215ENST00000597063 URB2Q14146 1524 aaKnown RBP32.41■■■□□ 2.78
STRN4-215ENST00000597063 TOPBP1Q92547 1522 aa32.2■■■□□ 2.74
STRN4-215ENST00000597063 ABCC8Q09428 1581 aa32.16■■■□□ 2.74
STRN4-215ENST00000597063 DNAJC5Q9H3Z4 198 aa32.14■■■□□ 2.74
STRN4-215ENST00000597063 DNMBPQ6XZF7 1577 aa32.14■■■□□ 2.74
STRN4-215ENST00000597063 IFT140Q96RY7 1462 aa32.02■■■□□ 2.72
STRN4-215ENST00000597063 ZNF608Q9ULD9 1512 aaPredicted RBP31.92■■■□□ 2.7
STRN4-215ENST00000597063 POLA1P09884 1462 aaPredicted RBP31.91■■■□□ 2.7
STRN4-215ENST00000597063 CUX1P39880 1505 aa31.9■■■□□ 2.7
STRN4-215ENST00000597063 FGD5Q6ZNL6 1462 aa31.84■■■□□ 2.69
STRN4-215ENST00000597063 TARBP1Q13395 1621 aaKnown RBP31.83■■■□□ 2.69
STRN4-215ENST00000597063 RAD54L2Q9Y4B4 1467 aa31.83■■■□□ 2.69
STRN4-215ENST00000597063 SOGA1O94964 1423 aa31.83■■■□□ 2.69
STRN4-215ENST00000597063 EIF4G3O43432 1585 aaKnown RBP31.77■■■□□ 2.68
STRN4-215ENST00000597063 AQRO60306 1485 aaKnown RBP eCLIP31.75■■■□□ 2.674e-7■■■□□ 16.1
STRN4-215ENST00000597063 TDRD9Q8NDG6 1382 aaKnown RBP31.68■■■□□ 2.66
STRN4-215ENST00000597063 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
STRN4-215ENST00000597063 OSCARQ8IYS5 282 aa31.64■■■□□ 2.66
STRN4-215ENST00000597063 SYNJ1O43426 1573 aa31.59■■■□□ 2.65
STRN4-215ENST00000597063 TOP2BQ02880 1626 aa31.58■■■□□ 2.65
STRN4-215ENST00000597063 BIVM-ERCC5R4GMW8 1640 aa31.58■■■□□ 2.65
STRN4-215ENST00000597063 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
STRN4-215ENST00000597063 FBLN2P98095 1184 aa31.51■■■□□ 2.63
STRN4-215ENST00000597063 ABCA10Q8WWZ4 1543 aa31.47■■■□□ 2.63
STRN4-215ENST00000597063 CHD1O14646 1710 aa31.45■■■□□ 2.63
STRN4-215ENST00000597063 GRIN2BQ13224 1484 aa31.43■■■□□ 2.62
STRN4-215ENST00000597063 GAPVD1Q14C86 1478 aa31.43■■■□□ 2.62
STRN4-215ENST00000597063 SNAPC4Q5SXM2 1469 aa31.43■■■□□ 2.62
STRN4-215ENST00000597063 PBRM1Q86U86 1689 aa31.4■■■□□ 2.62
STRN4-215ENST00000597063 ABCA5Q8WWZ7 1642 aa31.36■■■□□ 2.61
STRN4-215ENST00000597063 CHMP7Q8WUX9 453 aaPredicted RBP31.34■■■□□ 2.61
STRN4-215ENST00000597063 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
STRN4-215ENST00000597063 SYNJ2O15056 1496 aa31.23■■■□□ 2.59
STRN4-215ENST00000597063 TRIM41Q8WV44 630 aa31.18■■■□□ 2.58
STRN4-215ENST00000597063 RIMBP3CA6NJZ7 1639 aa31.11■■■□□ 2.57
STRN4-215ENST00000597063 RIMBP3BA6NNM3 1639 aa31.11■■■□□ 2.57
STRN4-215ENST00000597063 RIMBP3Q9UFD9 1639 aa31.11■■■□□ 2.57
STRN4-215ENST00000597063 ERICH3Q5RHP9 1530 aa31.09■■■□□ 2.57
STRN4-215ENST00000597063 ADAMTS12P58397 1594 aa31.09■■■□□ 2.57
STRN4-215ENST00000597063 ARHGEF11O15085 1522 aa31.07■■■□□ 2.56
STRN4-215ENST00000597063 FHAD1B1AJZ9 1412 aa31.05■■■□□ 2.56
STRN4-215ENST00000597063 GRIN2AQ12879 1464 aa31.02■■■□□ 2.56
STRN4-215ENST00000597063 KIF27Q86VH2 1401 aa31.02■■■□□ 2.56
STRN4-215ENST00000597063 CLASP1Q7Z460 1538 aa31.01■■■□□ 2.55
STRN4-215ENST00000597063 CYB5RLQ6IPT4 315 aa30.9■■■□□ 2.54
STRN4-215ENST00000597063 IGF1RP08069 1367 aa30.9■■■□□ 2.54
STRN4-215ENST00000597063 CEP170Q5SW79 1584 aa30.88■■■□□ 2.53
STRN4-215ENST00000597063 NUP160Q12769 1436 aa30.84■■■□□ 2.53
STRN4-215ENST00000597063 CUL7Q14999 1698 aa30.81■■■□□ 2.52
STRN4-215ENST00000597063 ARAP1Q96P48 1450 aa30.8■■■□□ 2.52
STRN4-215ENST00000597063 CARMIL1Q5VZK9 1371 aa30.75■■■□□ 2.51
STRN4-215ENST00000597063 RUSC2Q8N2Y8 1516 aa30.74■■■□□ 2.51
STRN4-215ENST00000597063 ERCC6L2Q5T890 1561 aa30.64■■■□□ 2.5
STRN4-215ENST00000597063 JPH4Q96JJ6 628 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms