RNA–Protein interactions for RNA: ENST00000596572.1

CPAMD8-209, Transcript of C3 and PZP like, alpha-2-macroglobulin domain containing 8, humanhuman

TSL 4

Gene CPAMD8, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPAMD8-209ENST00000596572 NISCHQ9Y2I1 1504 aa47.95■■■■■ 5.27
CPAMD8-209ENST00000596572 CCDC180Q9P1Z9 1646 aa42.63■■■■■ 4.41
CPAMD8-209ENST00000596572 ABCC9O60706 1549 aa42.16■■■■■ 4.34
CPAMD8-209ENST00000596572 DCAF8L2P0C7V8 631 aa40.44■■■■■ 4.06
CPAMD8-209ENST00000596572 RB1CC1Q8TDY2 1594 aa40.33■■■■■ 4.05
CPAMD8-209ENST00000596572 NACADO15069 1562 aa40.2■■■■■ 4.03
CPAMD8-209ENST00000596572 ZCCHC6Q5VYS8 1495 aaKnown RBP39.87■■■■□ 3.97
CPAMD8-209ENST00000596572 MYO15BQ96JP2 1530 aa39.81■■■■□ 3.96
CPAMD8-209ENST00000596572 DCAF1Q9Y4B6 1507 aa39.57■■■■□ 3.93
CPAMD8-209ENST00000596572 PABPN1Q86U42 306 aaKnown RBP eCLIP39.43■■■■□ 3.9
CPAMD8-209ENST00000596572 UNC13AQ9UPW8 1703 aa39.31■■■■□ 3.88
CPAMD8-209ENST00000596572 BICRAQ9NZM4 1560 aa39.08■■■■□ 3.85
CPAMD8-209ENST00000596572 SCRIBQ14160 1630 aa39.03■■■■□ 3.84
CPAMD8-209ENST00000596572 DNAJC5BQ9UF47 199 aa38.92■■■■□ 3.82
CPAMD8-209ENST00000596572 SHROOM4Q9ULL8 1493 aa38.6■■■■□ 3.77
CPAMD8-209ENST00000596572 EIF4G1Q04637 1599 aaKnown RBP38.12■■■■□ 3.69
CPAMD8-209ENST00000596572 CC2D2AQ9P2K1 1620 aa38.04■■■■□ 3.68
CPAMD8-209ENST00000596572 CECR2Q9BXF3 1484 aa37.88■■■■□ 3.65
CPAMD8-209ENST00000596572 SMARCA4P51532 1647 aa37.24■■■■□ 3.55
CPAMD8-209ENST00000596572 BAZ1AQ9NRL2 1556 aaPredicted RBP37.17■■■■□ 3.54
CPAMD8-209ENST00000596572 ATAD2BQ9ULI0 1458 aa37.13■■■■□ 3.54
CPAMD8-209ENST00000596572 NCAPD3P42695 1498 aa37.12■■■■□ 3.53
CPAMD8-209ENST00000596572 SMARCA2P51531 1590 aa37.05■■■■□ 3.52
CPAMD8-209ENST00000596572 MROH2BQ7Z745 1585 aa36.98■■■■□ 3.51
CPAMD8-209ENST00000596572 HMGXB3Q12766 1538 aa36.88■■■■□ 3.49
CPAMD8-209ENST00000596572 BAZ1BQ9UIG0 1483 aaKnown RBP36.85■■■■□ 3.49
CPAMD8-209ENST00000596572 PEG3Q9GZU2 1588 aa36.81■■■■□ 3.48
CPAMD8-209ENST00000596572 WIZO95785 1651 aa36.55■■■■□ 3.44
CPAMD8-209ENST00000596572 RSF1Q96T23 1441 aaPredicted RBP36.48■■■■□ 3.43
CPAMD8-209ENST00000596572 NESP48681 1621 aa36.38■■■■□ 3.41
CPAMD8-209ENST00000596572 ERCC6Q03468 1493 aa36.37■■■■□ 3.41
CPAMD8-209ENST00000596572 LAMC3Q9Y6N6 1575 aa36.16■■■■□ 3.38
CPAMD8-209ENST00000596572 TOP2AP11388 1531 aaKnown RBP36.13■■■■□ 3.38
CPAMD8-209ENST00000596572 CADPSQ9ULU8 1353 aa36.08■■■■□ 3.37
CPAMD8-209ENST00000596572 PDS5BQ9NTI5 1447 aa36■■■■□ 3.35
CPAMD8-209ENST00000596572 CUX2O14529 1486 aa35.96■■■■□ 3.35
CPAMD8-209ENST00000596572 KIF21AQ7Z4S6 1674 aa35.85■■■■□ 3.33
CPAMD8-209ENST00000596572 THOC2Q8NI27 1593 aaKnown RBP35.78■■■■□ 3.32
CPAMD8-209ENST00000596572 CFTRP13569 1480 aa35.77■■■■□ 3.32
CPAMD8-209ENST00000596572 CCDC88BA6NC98 1476 aa35.76■■■■□ 3.32
CPAMD8-209ENST00000596572 FANCD2Q9BXW9 1451 aa35.67■■■■□ 3.3
CPAMD8-209ENST00000596572 CEP164Q9UPV0 1460 aa35.65■■■■□ 3.3
CPAMD8-209ENST00000596572 MRC2Q9UBG0 1479 aa35.63■■■■□ 3.29
CPAMD8-209ENST00000596572 SUPT5HO00267 1087 aaKnown RBP35.56■■■■□ 3.28
CPAMD8-209ENST00000596572 WDR62O43379 1518 aa35.47■■■■□ 3.27
CPAMD8-209ENST00000596572 PRDM2Q13029 1718 aa35.35■■■■□ 3.25
CPAMD8-209ENST00000596572 URB2Q14146 1524 aaKnown RBP35.31■■■■□ 3.24
CPAMD8-209ENST00000596572 DNAJC5Q9H3Z4 198 aa35.22■■■■□ 3.23
CPAMD8-209ENST00000596572 TOPBP1Q92547 1522 aa35.06■■■■□ 3.2
CPAMD8-209ENST00000596572 ABCC8Q09428 1581 aa35■■■■□ 3.19
CPAMD8-209ENST00000596572 DNMBPQ6XZF7 1577 aa34.96■■■■□ 3.19
CPAMD8-209ENST00000596572 IFT140Q96RY7 1462 aa34.9■■■■□ 3.18
CPAMD8-209ENST00000596572 ZNF608Q9ULD9 1512 aaPredicted RBP34.8■■■■□ 3.16
CPAMD8-209ENST00000596572 POLA1P09884 1462 aaPredicted RBP34.74■■■■□ 3.15
CPAMD8-209ENST00000596572 CUX1P39880 1505 aa34.7■■■■□ 3.14
CPAMD8-209ENST00000596572 RAD54L2Q9Y4B4 1467 aa34.65■■■■□ 3.14
CPAMD8-209ENST00000596572 SOGA1O94964 1423 aa34.65■■■■□ 3.14
CPAMD8-209ENST00000596572 FGD5Q6ZNL6 1462 aa34.65■■■■□ 3.14
CPAMD8-209ENST00000596572 TARBP1Q13395 1621 aaKnown RBP34.63■■■■□ 3.13
CPAMD8-209ENST00000596572 AQRO60306 1485 aaKnown RBP eCLIP34.59■■■■□ 3.13
CPAMD8-209ENST00000596572 EIF4G3O43432 1585 aaKnown RBP34.58■■■■□ 3.13
CPAMD8-209ENST00000596572 OSCARQ8IYS5 282 aa34.54■■■■□ 3.12
CPAMD8-209ENST00000596572 TDRD9Q8NDG6 1382 aaKnown RBP34.52■■■■□ 3.12
CPAMD8-209ENST00000596572 WRNQ14191 1432 aaPredicted RBP eCLIP34.43■■■■□ 3.1
CPAMD8-209ENST00000596572 FBLN2P98095 1184 aa34.35■■■■□ 3.09
CPAMD8-209ENST00000596572 SYNJ1O43426 1573 aa34.31■■■■□ 3.08
CPAMD8-209ENST00000596572 WDR97A6NE52 1622 aa34.29■■■■□ 3.08
CPAMD8-209ENST00000596572 TOP2BQ02880 1626 aa34.29■■■■□ 3.08
CPAMD8-209ENST00000596572 BIVM-ERCC5R4GMW8 1640 aa34.26■■■■□ 3.07
CPAMD8-209ENST00000596572 ABCA10Q8WWZ4 1543 aa34.25■■■■□ 3.07
CPAMD8-209ENST00000596572 SNAPC4Q5SXM2 1469 aa34.25■■■■□ 3.07
CPAMD8-209ENST00000596572 GRIN2BQ13224 1484 aa34.23■■■■□ 3.07
CPAMD8-209ENST00000596572 GAPVD1Q14C86 1478 aa34.21■■■■□ 3.07
CPAMD8-209ENST00000596572 CHD1O14646 1710 aa34.17■■■■□ 3.06
CPAMD8-209ENST00000596572 CHMP7Q8WUX9 453 aaPredicted RBP34.16■■■■□ 3.06
CPAMD8-209ENST00000596572 MAGI1Q96QZ7 1491 aaPredicted RBP34.14■■■■□ 3.06
CPAMD8-209ENST00000596572 TRIM41Q8WV44 630 aa34.11■■■■□ 3.05
CPAMD8-209ENST00000596572 ABCA5Q8WWZ7 1642 aa34.1■■■■□ 3.05
CPAMD8-209ENST00000596572 PBRM1Q86U86 1689 aa34.07■■■■□ 3.04
CPAMD8-209ENST00000596572 SYNJ2O15056 1496 aa34.03■■■■□ 3.04
CPAMD8-209ENST00000596572 RIMBP3CA6NJZ7 1639 aa33.92■■■■□ 3.02
CPAMD8-209ENST00000596572 RIMBP3BA6NNM3 1639 aa33.92■■■■□ 3.02
CPAMD8-209ENST00000596572 RIMBP3Q9UFD9 1639 aa33.92■■■■□ 3.02
CPAMD8-209ENST00000596572 ARHGEF11O15085 1522 aa33.91■■■■□ 3.02
CPAMD8-209ENST00000596572 ADAMTS12P58397 1594 aa33.82■■■■□ 3
CPAMD8-209ENST00000596572 ERICH3Q5RHP9 1530 aa33.82■■■■□ 3
CPAMD8-209ENST00000596572 FHAD1B1AJZ9 1412 aa33.8■■■■□ 3
CPAMD8-209ENST00000596572 CLASP1Q7Z460 1538 aa33.8■■■■□ 3
CPAMD8-209ENST00000596572 GRIN2AQ12879 1464 aa33.78■■■■□ 3
CPAMD8-209ENST00000596572 CYB5RLQ6IPT4 315 aa33.75■■■□□ 2.99
CPAMD8-209ENST00000596572 KIF27Q86VH2 1401 aa33.73■■■□□ 2.99
CPAMD8-209ENST00000596572 ARAP1Q96P48 1450 aa33.63■■■□□ 2.97
CPAMD8-209ENST00000596572 NUP160Q12769 1436 aa33.62■■■□□ 2.97
CPAMD8-209ENST00000596572 IGF1RP08069 1367 aa33.61■■■□□ 2.97
CPAMD8-209ENST00000596572 CEP170Q5SW79 1584 aa33.61■■■□□ 2.97
CPAMD8-209ENST00000596572 CUL7Q14999 1698 aa33.45■■■□□ 2.94
CPAMD8-209ENST00000596572 CARMIL1Q5VZK9 1371 aa33.44■■■□□ 2.94
CPAMD8-209ENST00000596572 ERCC6L2Q5T890 1561 aa33.38■■■□□ 2.93
CPAMD8-209ENST00000596572 JPH4Q96JJ6 628 aa33.37■■■□□ 2.93
CPAMD8-209ENST00000596572 RUSC2Q8N2Y8 1516 aa33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms