RNA–Protein interactions for RNA: ENST00000596012.2

STRN4-212, Transcript of striatin 4, humanhuman

TSL 4

Gene STRN4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-212ENST00000596012 NISCHQ9Y2I1 1504 aa30.15■■■□□ 2.42
STRN4-212ENST00000596012 CCDC180Q9P1Z9 1646 aa26.43■■□□□ 1.82
STRN4-212ENST00000596012 ZCCHC6Q5VYS8 1495 aaKnown RBP25.31■■□□□ 1.64
STRN4-212ENST00000596012 DCAF1Q9Y4B6 1507 aa25.07■■□□□ 1.6
STRN4-212ENST00000596012 MYO15BQ96JP2 1530 aa24.82■■□□□ 1.56
STRN4-212ENST00000596012 ABCC9O60706 1549 aa24.81■■□□□ 1.56
STRN4-212ENST00000596012 DCAF8L2P0C7V8 631 aa24.74■■□□□ 1.55
STRN4-212ENST00000596012 NACADO15069 1562 aa24.62■■□□□ 1.53
STRN4-212ENST00000596012 RB1CC1Q8TDY2 1594 aa24.39■■□□□ 1.5
STRN4-212ENST00000596012 SHROOM4Q9ULL8 1493 aa24.3■■□□□ 1.48
STRN4-212ENST00000596012 SCRIBQ14160 1630 aa24.09■■□□□ 1.45
STRN4-212ENST00000596012 UNC13AQ9UPW8 1703 aa23.79■■□□□ 1.4
STRN4-212ENST00000596012 BICRAQ9NZM4 1560 aa23.56■■□□□ 1.36
STRN4-212ENST00000596012 SUPT5HO00267 1087 aaKnown RBP23.41■■□□□ 1.34
STRN4-212ENST00000596012 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.33
STRN4-212ENST00000596012 BAZ1AQ9NRL2 1556 aaPredicted RBP23.32■■□□□ 1.32
STRN4-212ENST00000596012 RSF1Q96T23 1441 aaPredicted RBP23.32■■□□□ 1.32
STRN4-212ENST00000596012 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
STRN4-212ENST00000596012 MROH2BQ7Z745 1585 aa23.2■■□□□ 1.3
STRN4-212ENST00000596012 SMARCA4P51532 1647 aa23.18■■□□□ 1.3
STRN4-212ENST00000596012 WIZO95785 1651 aa23■■□□□ 1.27
STRN4-212ENST00000596012 PEG3Q9GZU2 1588 aa22.98■■□□□ 1.27
STRN4-212ENST00000596012 SMARCA2P51531 1590 aa22.88■■□□□ 1.25
STRN4-212ENST00000596012 EIF4G1Q04637 1599 aaKnown RBP22.87■■□□□ 1.25
STRN4-212ENST00000596012 TOP2AP11388 1531 aaKnown RBP22.86■■□□□ 1.25
STRN4-212ENST00000596012 ATAD2BQ9ULI0 1458 aa22.8■■□□□ 1.24
STRN4-212ENST00000596012 NCAPD3P42695 1498 aa22.68■■□□□ 1.22
STRN4-212ENST00000596012 BAZ1BQ9UIG0 1483 aaKnown RBP22.68■■□□□ 1.22
STRN4-212ENST00000596012 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
STRN4-212ENST00000596012 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
STRN4-212ENST00000596012 CC2D2AQ9P2K1 1620 aa22.52■■□□□ 1.2
STRN4-212ENST00000596012 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
STRN4-212ENST00000596012 CFTRP13569 1480 aa22.14■■□□□ 1.13
STRN4-212ENST00000596012 TRIM41Q8WV44 630 aa22.13■■□□□ 1.13
STRN4-212ENST00000596012 CADPSQ9ULU8 1353 aa22.07■■□□□ 1.12
STRN4-212ENST00000596012 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
STRN4-212ENST00000596012 ABCC8Q09428 1581 aa21.98■■□□□ 1.11
STRN4-212ENST00000596012 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
STRN4-212ENST00000596012 LAMC3Q9Y6N6 1575 aa21.94■■□□□ 1.1
STRN4-212ENST00000596012 DNAJC5BQ9UF47 199 aa21.86■■□□□ 1.09
STRN4-212ENST00000596012 TOP2BQ02880 1626 aa21.84■■□□□ 1.09
STRN4-212ENST00000596012 SYNJ1O43426 1573 aa21.82■■□□□ 1.08
STRN4-212ENST00000596012 BIVM-ERCC5R4GMW8 1640 aa21.82■■□□□ 1.08
STRN4-212ENST00000596012 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
STRN4-212ENST00000596012 PDS5BQ9NTI5 1447 aa21.77■■□□□ 1.08
STRN4-212ENST00000596012 EEA1Q15075 1411 aa21.75■■□□□ 1.07
STRN4-212ENST00000596012 NESP48681 1621 aa21.74■■□□□ 1.07
STRN4-212ENST00000596012 CUX1P39880 1505 aa21.72■■□□□ 1.07
STRN4-212ENST00000596012 CEP164Q9UPV0 1460 aa21.68■■□□□ 1.06
STRN4-212ENST00000596012 DNMBPQ6XZF7 1577 aa21.62■■□□□ 1.05
STRN4-212ENST00000596012 SOGA1O94964 1423 aa21.58■■□□□ 1.05
STRN4-212ENST00000596012 FAM9AQ8IZU1 332 aaPredicted RBP21.56■■□□□ 1.04
STRN4-212ENST00000596012 KIF21AQ7Z4S6 1674 aa21.55■■□□□ 1.04
STRN4-212ENST00000596012 TOPBP1Q92547 1522 aa21.54■■□□□ 1.04
STRN4-212ENST00000596012 CSRNP3Q8WYN3 585 aa21.52■■□□□ 1.04
STRN4-212ENST00000596012 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
STRN4-212ENST00000596012 LOC105371045A0A1W2PR82 267 aa21.48■■□□□ 1.03
STRN4-212ENST00000596012 URB2Q14146 1524 aaKnown RBP21.48■■□□□ 1.03
STRN4-212ENST00000596012 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
STRN4-212ENST00000596012 RUSC2Q8N2Y8 1516 aa21.45■■□□□ 1.02
STRN4-212ENST00000596012 MRC2Q9UBG0 1479 aa21.45■■□□□ 1.02
STRN4-212ENST00000596012 POLA1P09884 1462 aaPredicted RBP21.42■■□□□ 1.02
STRN4-212ENST00000596012 KIF21BO75037 1637 aa21.4■■□□□ 1.02
STRN4-212ENST00000596012 ABCA10Q8WWZ4 1543 aa21.38■■□□□ 1.01
STRN4-212ENST00000596012 ERCC6Q03468 1493 aa21.36■■□□□ 1.01
STRN4-212ENST00000596012 CUX2O14529 1486 aa21.35■■□□□ 1.01
STRN4-212ENST00000596012 GOLGA3Q08378 1498 aa21.35■■□□□ 1.01
STRN4-212ENST00000596012 WDR62O43379 1518 aa21.34■■□□□ 1.01
STRN4-212ENST00000596012 ERICH3Q5RHP9 1530 aa21.29■■□□□ 1
STRN4-212ENST00000596012 WDR97A6NE52 1622 aa21.29■■□□□ 1
STRN4-212ENST00000596012 PRXQ9BXM0 1461 aa21.28■■□□□ 1
STRN4-212ENST00000596012 TNIKQ9UKE5 1360 aa21.28■■□□□ 1
STRN4-212ENST00000596012 RAD54L2Q9Y4B4 1467 aa21.27■■□□□ 1
STRN4-212ENST00000596012 THOC2Q8NI27 1593 aaKnown RBP21.24■□□□□ 0.99
STRN4-212ENST00000596012 TARBP1Q13395 1621 aaKnown RBP21.24■□□□□ 0.99
STRN4-212ENST00000596012 IGF1RP08069 1367 aa21.23■□□□□ 0.99
STRN4-212ENST00000596012 IFT140Q96RY7 1462 aa21.2■□□□□ 0.98
STRN4-212ENST00000596012 UBTFP17480 764 aaKnown RBP21.19■□□□□ 0.98
STRN4-212ENST00000596012 ABCA5Q8WWZ7 1642 aa21.18■□□□□ 0.98
STRN4-212ENST00000596012 RAPGEF2Q9Y4G8 1499 aa21.17■□□□□ 0.98
STRN4-212ENST00000596012 CUL7Q14999 1698 aa21.16■□□□□ 0.98
STRN4-212ENST00000596012 GAPVD1Q14C86 1478 aa21.14■□□□□ 0.98
STRN4-212ENST00000596012 EHMT2Q96KQ7 1210 aa21.14■□□□□ 0.97
STRN4-212ENST00000596012 CARMIL1Q5VZK9 1371 aa21.13■□□□□ 0.97
STRN4-212ENST00000596012 CEP162Q5TB80 1403 aa21.09■□□□□ 0.97
STRN4-212ENST00000596012 TDRD9Q8NDG6 1382 aaKnown RBP21.09■□□□□ 0.97
STRN4-212ENST00000596012 GRIN2BQ13224 1484 aa21.02■□□□□ 0.96
STRN4-212ENST00000596012 PBRM1Q86U86 1689 aa21.02■□□□□ 0.95
STRN4-212ENST00000596012 CLIP1P30622 1438 aa20.97■□□□□ 0.95
STRN4-212ENST00000596012 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.953e-7■■■□□ 16.4
STRN4-212ENST00000596012 FHAD1B1AJZ9 1412 aa20.95■□□□□ 0.94
STRN4-212ENST00000596012 ZNF608Q9ULD9 1512 aaPredicted RBP20.94■□□□□ 0.94
STRN4-212ENST00000596012 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
STRN4-212ENST00000596012 ADAMTS12P58397 1594 aa20.9■□□□□ 0.94
STRN4-212ENST00000596012 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
STRN4-212ENST00000596012 CTTNBP2Q8WZ74 1663 aa20.86■□□□□ 0.93
STRN4-212ENST00000596012 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
STRN4-212ENST00000596012 VPS8Q8N3P4 1428 aa20.8■□□□□ 0.92
STRN4-212ENST00000596012 EFCAB5A4FU69 1503 aa20.78■□□□□ 0.92
STRN4-212ENST00000596012 SYNJ2O15056 1496 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms