RNA–Protein interactions for RNA: ENST00000594085.5

PLD3-216, Transcript of phospholipase D family member 3, humanhuman

TSL 2

Gene PLD3, Length 503 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-216ENST00000594085 NISCHQ9Y2I1 1504 aa46.85■■■■■ 5.09
PLD3-216ENST00000594085 CCDC180Q9P1Z9 1646 aa41.65■■■■■ 4.26
PLD3-216ENST00000594085 ABCC9O60706 1549 aa41.28■■■■■ 4.2
PLD3-216ENST00000594085 DCAF8L2P0C7V8 631 aa39.65■■■■□ 3.94
PLD3-216ENST00000594085 RB1CC1Q8TDY2 1594 aa39.45■■■■□ 3.91
PLD3-216ENST00000594085 NACADO15069 1562 aa39.32■■■■□ 3.88
PLD3-216ENST00000594085 ZCCHC6Q5VYS8 1495 aaKnown RBP38.9■■■■□ 3.82
PLD3-216ENST00000594085 MYO15BQ96JP2 1530 aa38.89■■■■□ 3.82
PLD3-216ENST00000594085 PABPN1Q86U42 306 aaKnown RBP eCLIP38.67■■■■□ 3.78
PLD3-216ENST00000594085 DCAF1Q9Y4B6 1507 aa38.64■■■■□ 3.78
PLD3-216ENST00000594085 UNC13AQ9UPW8 1703 aa38.52■■■■□ 3.76
PLD3-216ENST00000594085 DNAJC5BQ9UF47 199 aa38.28■■■■□ 3.72
PLD3-216ENST00000594085 BICRAQ9NZM4 1560 aa38.26■■■■□ 3.72
PLD3-216ENST00000594085 SCRIBQ14160 1630 aa38.12■■■■□ 3.69
PLD3-216ENST00000594085 SHROOM4Q9ULL8 1493 aa37.7■■■■□ 3.63
PLD3-216ENST00000594085 EIF4G1Q04637 1599 aaKnown RBP37.29■■■■□ 3.56
PLD3-216ENST00000594085 CC2D2AQ9P2K1 1620 aa37.24■■■■□ 3.55
PLD3-216ENST00000594085 CECR2Q9BXF3 1484 aa37.09■■■■□ 3.53
PLD3-216ENST00000594085 SMARCA4P51532 1647 aa36.38■■■■□ 3.41
PLD3-216ENST00000594085 NCAPD3P42695 1498 aa36.33■■■■□ 3.41
PLD3-216ENST00000594085 ATAD2BQ9ULI0 1458 aa36.32■■■■□ 3.41
PLD3-216ENST00000594085 BAZ1AQ9NRL2 1556 aaPredicted RBP36.3■■■■□ 3.4
PLD3-216ENST00000594085 SMARCA2P51531 1590 aa36.21■■■■□ 3.39
PLD3-216ENST00000594085 MROH2BQ7Z745 1585 aa36.15■■■■□ 3.38
PLD3-216ENST00000594085 HMGXB3Q12766 1538 aa36.03■■■■□ 3.36
PLD3-216ENST00000594085 BAZ1BQ9UIG0 1483 aaKnown RBP36■■■■□ 3.35
PLD3-216ENST00000594085 PEG3Q9GZU2 1588 aa35.95■■■■□ 3.35
PLD3-216ENST00000594085 WIZO95785 1651 aa35.74■■■■□ 3.31
PLD3-216ENST00000594085 RSF1Q96T23 1441 aaPredicted RBP35.64■■■■□ 3.3
PLD3-216ENST00000594085 NESP48681 1621 aa35.62■■■■□ 3.29
PLD3-216ENST00000594085 ERCC6Q03468 1493 aa35.6■■■■□ 3.29
PLD3-216ENST00000594085 LAMC3Q9Y6N6 1575 aa35.37■■■■□ 3.25
PLD3-216ENST00000594085 CADPSQ9ULU8 1353 aa35.32■■■■□ 3.24
PLD3-216ENST00000594085 TOP2AP11388 1531 aaKnown RBP35.27■■■■□ 3.24
PLD3-216ENST00000594085 PDS5BQ9NTI5 1447 aa35.23■■■■□ 3.23
PLD3-216ENST00000594085 CUX2O14529 1486 aa35.22■■■■□ 3.23
PLD3-216ENST00000594085 KIF21AQ7Z4S6 1674 aa35.09■■■■□ 3.21
PLD3-216ENST00000594085 THOC2Q8NI27 1593 aaKnown RBP34.99■■■■□ 3.19
PLD3-216ENST00000594085 CFTRP13569 1480 aa34.97■■■■□ 3.19
PLD3-216ENST00000594085 CCDC88BA6NC98 1476 aa34.96■■■■□ 3.19
PLD3-216ENST00000594085 FANCD2Q9BXW9 1451 aa34.89■■■■□ 3.18
PLD3-216ENST00000594085 MRC2Q9UBG0 1479 aa34.84■■■■□ 3.17
PLD3-216ENST00000594085 CEP164Q9UPV0 1460 aa34.84■■■■□ 3.17
PLD3-216ENST00000594085 SUPT5HO00267 1087 aaKnown RBP34.76■■■■□ 3.16
PLD3-216ENST00000594085 WDR62O43379 1518 aa34.68■■■■□ 3.14
PLD3-216ENST00000594085 DNAJC5Q9H3Z4 198 aa34.68■■■■□ 3.14
PLD3-216ENST00000594085 PRDM2Q13029 1718 aa34.55■■■■□ 3.12
PLD3-216ENST00000594085 URB2Q14146 1524 aaKnown RBP34.54■■■■□ 3.12
PLD3-216ENST00000594085 TOPBP1Q92547 1522 aa34.27■■■■□ 3.08
PLD3-216ENST00000594085 ABCC8Q09428 1581 aa34.23■■■■□ 3.07
PLD3-216ENST00000594085 DNMBPQ6XZF7 1577 aa34.15■■■■□ 3.06
PLD3-216ENST00000594085 IFT140Q96RY7 1462 aa34.13■■■■□ 3.05
PLD3-216ENST00000594085 ZNF608Q9ULD9 1512 aaPredicted RBP34.04■■■■□ 3.04
PLD3-216ENST00000594085 POLA1P09884 1462 aaPredicted RBP33.95■■■■□ 3.03
PLD3-216ENST00000594085 OSCARQ8IYS5 282 aa33.92■■■■□ 3.02
PLD3-216ENST00000594085 SOGA1O94964 1423 aa33.91■■■■□ 3.02
PLD3-216ENST00000594085 RAD54L2Q9Y4B4 1467 aa33.9■■■■□ 3.02
PLD3-216ENST00000594085 CUX1P39880 1505 aa33.89■■■■□ 3.02
PLD3-216ENST00000594085 AQRO60306 1485 aaKnown RBP eCLIP33.88■■■■□ 3.01
PLD3-216ENST00000594085 TARBP1Q13395 1621 aaKnown RBP33.86■■■■□ 3.01
PLD3-216ENST00000594085 FGD5Q6ZNL6 1462 aa33.85■■■■□ 3.01
PLD3-216ENST00000594085 TDRD9Q8NDG6 1382 aaKnown RBP33.8■■■■□ 3
PLD3-216ENST00000594085 EIF4G3O43432 1585 aaKnown RBP33.79■■■■□ 3
PLD3-216ENST00000594085 FBLN2P98095 1184 aa33.68■■■□□ 2.98
PLD3-216ENST00000594085 WRNQ14191 1432 aaPredicted RBP eCLIP33.61■■■□□ 2.97
PLD3-216ENST00000594085 TRIM41Q8WV44 630 aa33.53■■■□□ 2.96
PLD3-216ENST00000594085 WDR97A6NE52 1622 aa33.49■■■□□ 2.95
PLD3-216ENST00000594085 SYNJ1O43426 1573 aa33.48■■■□□ 2.95
PLD3-216ENST00000594085 TOP2BQ02880 1626 aa33.48■■■□□ 2.95
PLD3-216ENST00000594085 CHMP7Q8WUX9 453 aaPredicted RBP33.47■■■□□ 2.95
PLD3-216ENST00000594085 GRIN2BQ13224 1484 aa33.47■■■□□ 2.95
PLD3-216ENST00000594085 SNAPC4Q5SXM2 1469 aa33.47■■■□□ 2.95
PLD3-216ENST00000594085 GAPVD1Q14C86 1478 aa33.46■■■□□ 2.95
PLD3-216ENST00000594085 ABCA10Q8WWZ4 1543 aa33.46■■■□□ 2.95
PLD3-216ENST00000594085 CHD1O14646 1710 aa33.45■■■□□ 2.95
PLD3-216ENST00000594085 BIVM-ERCC5R4GMW8 1640 aa33.45■■■□□ 2.95
PLD3-216ENST00000594085 MAGI1Q96QZ7 1491 aaPredicted RBP33.37■■■□□ 2.93
PLD3-216ENST00000594085 PBRM1Q86U86 1689 aa33.3■■■□□ 2.92
PLD3-216ENST00000594085 ABCA5Q8WWZ7 1642 aa33.29■■■□□ 2.92
PLD3-216ENST00000594085 SYNJ2O15056 1496 aa33.27■■■□□ 2.92
PLD3-216ENST00000594085 RIMBP3CA6NJZ7 1639 aa33.24■■■□□ 2.91
PLD3-216ENST00000594085 RIMBP3BA6NNM3 1639 aa33.24■■■□□ 2.91
PLD3-216ENST00000594085 RIMBP3Q9UFD9 1639 aa33.24■■■□□ 2.91
PLD3-216ENST00000594085 ARHGEF11O15085 1522 aa33.2■■■□□ 2.91
PLD3-216ENST00000594085 CYB5RLQ6IPT4 315 aa33.14■■■□□ 2.9
PLD3-216ENST00000594085 CLASP1Q7Z460 1538 aa33.05■■■□□ 2.88
PLD3-216ENST00000594085 FHAD1B1AJZ9 1412 aa33.04■■■□□ 2.88
PLD3-216ENST00000594085 ERICH3Q5RHP9 1530 aa33.04■■■□□ 2.88
PLD3-216ENST00000594085 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
PLD3-216ENST00000594085 ADAMTS12P58397 1594 aa33.01■■■□□ 2.88
PLD3-216ENST00000594085 KIF27Q86VH2 1401 aa32.94■■■□□ 2.86
PLD3-216ENST00000594085 ARAP1Q96P48 1450 aa32.92■■■□□ 2.86
PLD3-216ENST00000594085 IGF1RP08069 1367 aa32.9■■■□□ 2.86
PLD3-216ENST00000594085 NUP160Q12769 1436 aa32.86■■■□□ 2.85
PLD3-216ENST00000594085 CEP170Q5SW79 1584 aa32.85■■■□□ 2.85
PLD3-216ENST00000594085 JPH4Q96JJ6 628 aa32.72■■■□□ 2.83
PLD3-216ENST00000594085 CARMIL1Q5VZK9 1371 aa32.7■■■□□ 2.83
PLD3-216ENST00000594085 ERCC6L2Q5T890 1561 aa32.66■■■□□ 2.82
PLD3-216ENST00000594085 CUL7Q14999 1698 aa32.65■■■□□ 2.82
PLD3-216ENST00000594085 RUSC2Q8N2Y8 1516 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms