RNA–Protein interactions for RNA: ENST00000591461.1

PKN1-213, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-213ENST00000591461 NISCHQ9Y2I1 1504 aa35.54■■■■□ 3.28
PKN1-213ENST00000591461 CCDC180Q9P1Z9 1646 aa31.38■■■□□ 2.61
PKN1-213ENST00000591461 ABCC9O60706 1549 aa31.14■■■□□ 2.57
PKN1-213ENST00000591461 DCAF8L2P0C7V8 631 aa30.03■■■□□ 2.4
PKN1-213ENST00000591461 RB1CC1Q8TDY2 1594 aa29.68■■■□□ 2.34
PKN1-213ENST00000591461 NACADO15069 1562 aa29.62■■■□□ 2.33
PKN1-213ENST00000591461 ZCCHC6Q5VYS8 1495 aaKnown RBP29.57■■■□□ 2.32
PKN1-213ENST00000591461 MYO15BQ96JP2 1530 aa29.35■■■□□ 2.29
PKN1-213ENST00000591461 DCAF1Q9Y4B6 1507 aa29.25■■■□□ 2.27
PKN1-213ENST00000591461 PABPN1Q86U42 306 aaKnown RBP eCLIP29.24■■■□□ 2.27
PKN1-213ENST00000591461 UNC13AQ9UPW8 1703 aa28.97■■■□□ 2.23
PKN1-213ENST00000591461 SCRIBQ14160 1630 aa28.91■■■□□ 2.22
PKN1-213ENST00000591461 BICRAQ9NZM4 1560 aa28.9■■■□□ 2.22
PKN1-213ENST00000591461 DNAJC5BQ9UF47 199 aa28.81■■■□□ 2.2
PKN1-213ENST00000591461 SHROOM4Q9ULL8 1493 aa28.36■■■□□ 2.13
PKN1-213ENST00000591461 EIF4G1Q04637 1599 aaKnown RBP28.11■■■□□ 2.09
PKN1-213ENST00000591461 CC2D2AQ9P2K1 1620 aa28.03■■■□□ 2.08
PKN1-213ENST00000591461 CECR2Q9BXF3 1484 aa27.9■■■□□ 2.06
PKN1-213ENST00000591461 SMARCA4P51532 1647 aa27.54■■■□□ 2
PKN1-213ENST00000591461 ATAD2BQ9ULI0 1458 aa27.5■■□□□ 1.99
PKN1-213ENST00000591461 MROH2BQ7Z745 1585 aa27.49■■□□□ 1.99
PKN1-213ENST00000591461 BAZ1AQ9NRL2 1556 aaPredicted RBP27.47■■□□□ 1.99
PKN1-213ENST00000591461 NCAPD3P42695 1498 aa27.43■■□□□ 1.98
PKN1-213ENST00000591461 SMARCA2P51531 1590 aa27.31■■□□□ 1.96
PKN1-213ENST00000591461 BAZ1BQ9UIG0 1483 aaKnown RBP27.23■■□□□ 1.95
PKN1-213ENST00000591461 PEG3Q9GZU2 1588 aa27.18■■□□□ 1.94
PKN1-213ENST00000591461 HMGXB3Q12766 1538 aa27.18■■□□□ 1.94
PKN1-213ENST00000591461 RSF1Q96T23 1441 aaPredicted RBP27.16■■□□□ 1.94
PKN1-213ENST00000591461 WIZO95785 1651 aa27.14■■□□□ 1.93
PKN1-213ENST00000591461 NESP48681 1621 aa26.95■■□□□ 1.91
PKN1-213ENST00000591461 TOP2AP11388 1531 aaKnown RBP26.77■■□□□ 1.88
PKN1-213ENST00000591461 ERCC6Q03468 1493 aa26.75■■□□□ 1.87
PKN1-213ENST00000591461 CADPSQ9ULU8 1353 aa26.7■■□□□ 1.86
PKN1-213ENST00000591461 SUPT5HO00267 1087 aaKnown RBP26.64■■□□□ 1.86
PKN1-213ENST00000591461 LAMC3Q9Y6N6 1575 aa26.61■■□□□ 1.85
PKN1-213ENST00000591461 CCDC88BA6NC98 1476 aa26.59■■□□□ 1.85
PKN1-213ENST00000591461 PDS5BQ9NTI5 1447 aa26.53■■□□□ 1.84
PKN1-213ENST00000591461 CFTRP13569 1480 aa26.48■■□□□ 1.83
PKN1-213ENST00000591461 KIF21AQ7Z4S6 1674 aa26.42■■□□□ 1.82
PKN1-213ENST00000591461 FANCD2Q9BXW9 1451 aa26.37■■□□□ 1.81
PKN1-213ENST00000591461 CUX2O14529 1486 aa26.36■■□□□ 1.81
PKN1-213ENST00000591461 THOC2Q8NI27 1593 aaKnown RBP26.35■■□□□ 1.81
PKN1-213ENST00000591461 CEP164Q9UPV0 1460 aa26.3■■□□□ 1.8
PKN1-213ENST00000591461 MRC2Q9UBG0 1479 aa26.27■■□□□ 1.8
PKN1-213ENST00000591461 WDR62O43379 1518 aa26.14■■□□□ 1.78
PKN1-213ENST00000591461 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.78
PKN1-213ENST00000591461 PRDM2Q13029 1718 aa25.98■■□□□ 1.75
PKN1-213ENST00000591461 TOPBP1Q92547 1522 aa25.93■■□□□ 1.74
PKN1-213ENST00000591461 DNMBPQ6XZF7 1577 aa25.82■■□□□ 1.72
PKN1-213ENST00000591461 DNAJC5Q9H3Z4 198 aa25.81■■□□□ 1.72
PKN1-213ENST00000591461 ZNF608Q9ULD9 1512 aaPredicted RBP25.78■■□□□ 1.72
PKN1-213ENST00000591461 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
PKN1-213ENST00000591461 CUX1P39880 1505 aa25.76■■□□□ 1.71
PKN1-213ENST00000591461 IFT140Q96RY7 1462 aa25.74■■□□□ 1.71
PKN1-213ENST00000591461 RAD54L2Q9Y4B4 1467 aa25.73■■□□□ 1.71
PKN1-213ENST00000591461 POLA1P09884 1462 aaPredicted RBP25.72■■□□□ 1.71
PKN1-213ENST00000591461 FGD5Q6ZNL6 1462 aa25.66■■□□□ 1.7
PKN1-213ENST00000591461 SOGA1O94964 1423 aa25.66■■□□□ 1.7
PKN1-213ENST00000591461 AQRO60306 1485 aaKnown RBP eCLIP25.65■■□□□ 1.74e-6■■■■□ 25.4
PKN1-213ENST00000591461 TDRD9Q8NDG6 1382 aaKnown RBP25.62■■□□□ 1.69
PKN1-213ENST00000591461 TARBP1Q13395 1621 aaKnown RBP25.59■■□□□ 1.69
PKN1-213ENST00000591461 WRNQ14191 1432 aaPredicted RBP eCLIP25.56■■□□□ 1.68
PKN1-213ENST00000591461 SYNJ1O43426 1573 aa25.5■■□□□ 1.67
PKN1-213ENST00000591461 EIF4G3O43432 1585 aaKnown RBP25.5■■□□□ 1.67
PKN1-213ENST00000591461 OSCARQ8IYS5 282 aa25.43■■□□□ 1.66
PKN1-213ENST00000591461 FBLN2P98095 1184 aa25.41■■□□□ 1.66
PKN1-213ENST00000591461 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
PKN1-213ENST00000591461 BIVM-ERCC5R4GMW8 1640 aa25.36■■□□□ 1.65
PKN1-213ENST00000591461 ABCA10Q8WWZ4 1543 aa25.35■■□□□ 1.65
PKN1-213ENST00000591461 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
PKN1-213ENST00000591461 GAPVD1Q14C86 1478 aa25.32■■□□□ 1.64
PKN1-213ENST00000591461 GRIN2BQ13224 1484 aa25.29■■□□□ 1.64
PKN1-213ENST00000591461 WDR97A6NE52 1622 aa25.29■■□□□ 1.64
PKN1-213ENST00000591461 CHMP7Q8WUX9 453 aaPredicted RBP25.24■■□□□ 1.63
PKN1-213ENST00000591461 ABCA5Q8WWZ7 1642 aa25.21■■□□□ 1.63
PKN1-213ENST00000591461 MAGI1Q96QZ7 1491 aaPredicted RBP25.16■■□□□ 1.62
PKN1-213ENST00000591461 CHD1O14646 1710 aa25.15■■□□□ 1.62
PKN1-213ENST00000591461 PBRM1Q86U86 1689 aa25.12■■□□□ 1.61
PKN1-213ENST00000591461 SYNJ2O15056 1496 aa25.11■■□□□ 1.61
PKN1-213ENST00000591461 TRIM41Q8WV44 630 aa25.08■■□□□ 1.61
PKN1-213ENST00000591461 IGF1RP08069 1367 aa25.02■■□□□ 1.6
PKN1-213ENST00000591461 FHAD1B1AJZ9 1412 aa25■■□□□ 1.59
PKN1-213ENST00000591461 KIF27Q86VH2 1401 aa25■■□□□ 1.59
PKN1-213ENST00000591461 ADAMTS12P58397 1594 aa25■■□□□ 1.59
PKN1-213ENST00000591461 ERICH3Q5RHP9 1530 aa24.99■■□□□ 1.59
PKN1-213ENST00000591461 GRIN2AQ12879 1464 aa24.96■■□□□ 1.59
PKN1-213ENST00000591461 RUSC2Q8N2Y8 1516 aa24.96■■□□□ 1.59
PKN1-213ENST00000591461 ARHGEF11O15085 1522 aa24.95■■□□□ 1.58
PKN1-213ENST00000591461 RIMBP3CA6NJZ7 1639 aa24.94■■□□□ 1.58
PKN1-213ENST00000591461 RIMBP3BA6NNM3 1639 aa24.94■■□□□ 1.58
PKN1-213ENST00000591461 RIMBP3Q9UFD9 1639 aa24.94■■□□□ 1.58
PKN1-213ENST00000591461 CLASP1Q7Z460 1538 aa24.93■■□□□ 1.58
PKN1-213ENST00000591461 CYB5RLQ6IPT4 315 aa24.9■■□□□ 1.58
PKN1-213ENST00000591461 CEP170Q5SW79 1584 aa24.87■■□□□ 1.57
PKN1-213ENST00000591461 NUP160Q12769 1436 aa24.86■■□□□ 1.57
PKN1-213ENST00000591461 CARMIL1Q5VZK9 1371 aa24.83■■□□□ 1.57
PKN1-213ENST00000591461 ARAP1Q96P48 1450 aa24.8■■□□□ 1.56
PKN1-213ENST00000591461 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
PKN1-213ENST00000591461 ERCC6L2Q5T890 1561 aa24.75■■□□□ 1.55
PKN1-213ENST00000591461 JPH4Q96JJ6 628 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms