RNA–Protein interactions for RNA: ENST00000591006.5

SLC25A39-213, Transcript of solute carrier family 25 member 39, humanhuman

TSL 2

Gene SLC25A39, Length 2,217 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-213ENST00000591006 NISCHQ9Y2I1 1504 aa29■■■□□ 2.23
SLC25A39-213ENST00000591006 CCDC180Q9P1Z9 1646 aa25.02■■□□□ 1.6
SLC25A39-213ENST00000591006 ZCCHC6Q5VYS8 1495 aaKnown RBP24.46■■□□□ 1.51
SLC25A39-213ENST00000591006 SHROOM4Q9ULL8 1493 aa24.06■■□□□ 1.44
SLC25A39-213ENST00000591006 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
SLC25A39-213ENST00000591006 DCAF8L2P0C7V8 631 aa23.82■■□□□ 1.4
SLC25A39-213ENST00000591006 MYO15BQ96JP2 1530 aa23.48■■□□□ 1.35
SLC25A39-213ENST00000591006 SUPT5HO00267 1087 aaKnown RBP23.41■■□□□ 1.34
SLC25A39-213ENST00000591006 ABCC9O60706 1549 aa23.24■■□□□ 1.31
SLC25A39-213ENST00000591006 NACADO15069 1562 aa23.18■■□□□ 1.3
SLC25A39-213ENST00000591006 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
SLC25A39-213ENST00000591006 RB1CC1Q8TDY2 1594 aa22.86■■□□□ 1.25
SLC25A39-213ENST00000591006 RSF1Q96T23 1441 aaPredicted RBP22.71■■□□□ 1.23
SLC25A39-213ENST00000591006 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
SLC25A39-213ENST00000591006 CECR2Q9BXF3 1484 aa22.51■■□□□ 1.19
SLC25A39-213ENST00000591006 MROH2BQ7Z745 1585 aa22.44■■□□□ 1.18
SLC25A39-213ENST00000591006 UNC13AQ9UPW8 1703 aa22.44■■□□□ 1.18
SLC25A39-213ENST00000591006 BAZ1AQ9NRL2 1556 aaPredicted RBP22.34■■□□□ 1.17
SLC25A39-213ENST00000591006 WIZO95785 1651 aa22.28■■□□□ 1.16
SLC25A39-213ENST00000591006 BICRAQ9NZM4 1560 aa22.19■■□□□ 1.14
SLC25A39-213ENST00000591006 SMARCA4P51532 1647 aa22.18■■□□□ 1.14
SLC25A39-213ENST00000591006 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
SLC25A39-213ENST00000591006 PABPN1Q86U42 306 aaKnown RBP eCLIP22.04■■□□□ 1.125e-7■■■□□ 15.5
SLC25A39-213ENST00000591006 TRIM41Q8WV44 630 aa21.97■■□□□ 1.11
SLC25A39-213ENST00000591006 LOC105371045A0A1W2PR82 267 aa21.92■■□□□ 1.1
SLC25A39-213ENST00000591006 EIF4G1Q04637 1599 aaKnown RBP21.9■■□□□ 1.1
SLC25A39-213ENST00000591006 PEG3Q9GZU2 1588 aa21.88■■□□□ 1.09
SLC25A39-213ENST00000591006 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
SLC25A39-213ENST00000591006 CCDC88BA6NC98 1476 aa21.85■■□□□ 1.09
SLC25A39-213ENST00000591006 ATAD2BQ9ULI0 1458 aa21.7■■□□□ 1.06
SLC25A39-213ENST00000591006 FAM9AQ8IZU1 332 aaPredicted RBP21.65■■□□□ 1.06
SLC25A39-213ENST00000591006 BAZ1BQ9UIG0 1483 aaKnown RBP21.6■■□□□ 1.05
SLC25A39-213ENST00000591006 PCGF6Q9BYE7 350 aa21.57■■□□□ 1.04
SLC25A39-213ENST00000591006 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
SLC25A39-213ENST00000591006 EHMT2Q96KQ7 1210 aa21.53■■□□□ 1.04
SLC25A39-213ENST00000591006 HRCP23327 699 aa21.47■■□□□ 1.03
SLC25A39-213ENST00000591006 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
SLC25A39-213ENST00000591006 NCAPD3P42695 1498 aa21.41■■□□□ 1.02
SLC25A39-213ENST00000591006 WRNQ14191 1432 aaPredicted RBP eCLIP21.36■■□□□ 1.01
SLC25A39-213ENST00000591006 EEA1Q15075 1411 aa21.32■■□□□ 1
SLC25A39-213ENST00000591006 SOGA1O94964 1423 aa21.28■■□□□ 1
SLC25A39-213ENST00000591006 TRIM26Q12899 539 aaPredicted RBP21.26■□□□□ 0.99
SLC25A39-213ENST00000591006 SYNJ1O43426 1573 aa21.25■□□□□ 0.99
SLC25A39-213ENST00000591006 PELP1Q8IZL8 1130 aaKnown RBP21.2■□□□□ 0.98
SLC25A39-213ENST00000591006 CSRNP3Q8WYN3 585 aa21.17■□□□□ 0.98
SLC25A39-213ENST00000591006 RUSC2Q8N2Y8 1516 aa21.17■□□□□ 0.98
SLC25A39-213ENST00000591006 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
SLC25A39-213ENST00000591006 TNIKQ9UKE5 1360 aa21.1■□□□□ 0.97
SLC25A39-213ENST00000591006 CFTRP13569 1480 aa21.09■□□□□ 0.97
SLC25A39-213ENST00000591006 BIVM-ERCC5R4GMW8 1640 aa21.08■□□□□ 0.96
SLC25A39-213ENST00000591006 GOLGA3Q08378 1498 aa21.06■□□□□ 0.96
SLC25A39-213ENST00000591006 CC2D2AQ9P2K1 1620 aa21.03■□□□□ 0.96
SLC25A39-213ENST00000591006 CEP162Q5TB80 1403 aa21.02■□□□□ 0.96
SLC25A39-213ENST00000591006 KIF21BO75037 1637 aa21.01■□□□□ 0.95
SLC25A39-213ENST00000591006 DNAJC5BQ9UF47 199 aa21.01■□□□□ 0.95
SLC25A39-213ENST00000591006 PPARGC1BQ86YN6 1023 aaKnown RBP21.01■□□□□ 0.95
SLC25A39-213ENST00000591006 CEP164Q9UPV0 1460 aa21■□□□□ 0.95
SLC25A39-213ENST00000591006 PRDM2Q13029 1718 aa20.99■□□□□ 0.95
SLC25A39-213ENST00000591006 UBTFP17480 764 aaKnown RBP20.96■□□□□ 0.95
SLC25A39-213ENST00000591006 CUX1P39880 1505 aa20.95■□□□□ 0.94
SLC25A39-213ENST00000591006 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
SLC25A39-213ENST00000591006 RAPGEF2Q9Y4G8 1499 aa20.81■□□□□ 0.92
SLC25A39-213ENST00000591006 ERICH3Q5RHP9 1530 aa20.77■□□□□ 0.92
SLC25A39-213ENST00000591006 KIF27Q86VH2 1401 aa20.77■□□□□ 0.92
SLC25A39-213ENST00000591006 PRXQ9BXM0 1461 aa20.76■□□□□ 0.91
SLC25A39-213ENST00000591006 ZEB1P37275 1124 aaPredicted RBP20.76■□□□□ 0.91
SLC25A39-213ENST00000591006 CLIP1P30622 1438 aa20.74■□□□□ 0.91
SLC25A39-213ENST00000591006 TTBK1Q5TCY1 1321 aaPredicted RBP20.74■□□□□ 0.91
SLC25A39-213ENST00000591006 FANCD2Q9BXW9 1451 aa20.68■□□□□ 0.9
SLC25A39-213ENST00000591006 FGD5Q6ZNL6 1462 aa20.64■□□□□ 0.89
SLC25A39-213ENST00000591006 VPS8Q8N3P4 1428 aa20.63■□□□□ 0.89
SLC25A39-213ENST00000591006 CUX2O14529 1486 aa20.61■□□□□ 0.89
SLC25A39-213ENST00000591006 DNMBPQ6XZF7 1577 aa20.59■□□□□ 0.89
SLC25A39-213ENST00000591006 LAMC3Q9Y6N6 1575 aa20.59■□□□□ 0.89
SLC25A39-213ENST00000591006 NESP48681 1621 aa20.57■□□□□ 0.88
SLC25A39-213ENST00000591006 RANGAP1P46060 587 aaPredicted RBP20.56■□□□□ 0.88
SLC25A39-213ENST00000591006 MYT1Q01538 1121 aa20.55■□□□□ 0.88
SLC25A39-213ENST00000591006 IGF1RP08069 1367 aa20.54■□□□□ 0.88
SLC25A39-213ENST00000591006 TOPBP1Q92547 1522 aa20.51■□□□□ 0.87
SLC25A39-213ENST00000591006 ARAP1Q96P48 1450 aa20.48■□□□□ 0.87
SLC25A39-213ENST00000591006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.47■□□□□ 0.87
SLC25A39-213ENST00000591006 POLA1P09884 1462 aaPredicted RBP20.46■□□□□ 0.87
SLC25A39-213ENST00000591006 ABCA10Q8WWZ4 1543 aa20.46■□□□□ 0.87
SLC25A39-213ENST00000591006 CARMIL1Q5VZK9 1371 aa20.45■□□□□ 0.86
SLC25A39-213ENST00000591006 APLP2Q06481 763 aa20.45■□□□□ 0.86
SLC25A39-213ENST00000591006 PDS5BQ9NTI5 1447 aa20.43■□□□□ 0.86
SLC25A39-213ENST00000591006 RAD54L2Q9Y4B4 1467 aa20.41■□□□□ 0.86
SLC25A39-213ENST00000591006 URB2Q14146 1524 aaKnown RBP20.4■□□□□ 0.86
SLC25A39-213ENST00000591006 ARHGAP35Q9NRY4 1499 aa20.38■□□□□ 0.85
SLC25A39-213ENST00000591006 CCER1Q8TC90 406 aaPredicted RBP20.36■□□□□ 0.85
SLC25A39-213ENST00000591006 WDR97A6NE52 1622 aa20.33■□□□□ 0.85
SLC25A39-213ENST00000591006 CUL7Q14999 1698 aa20.31■□□□□ 0.84
SLC25A39-213ENST00000591006 KIF21AQ7Z4S6 1674 aa20.31■□□□□ 0.84
SLC25A39-213ENST00000591006 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
SLC25A39-213ENST00000591006 SCAF1Q9H7N4 1312 aaKnown RBP20.23■□□□□ 0.83
SLC25A39-213ENST00000591006 KANK4Q5T7N3 995 aaPredicted RBP20.19■□□□□ 0.82
SLC25A39-213ENST00000591006 HNRNPUL2Q1KMD3 747 aaKnown RBP20.18■□□□□ 0.82
SLC25A39-213ENST00000591006 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
SLC25A39-213ENST00000591006 MAP3K1Q13233 1512 aa20.18■□□□□ 0.82
SLC25A39-213ENST00000591006 CTTNBP2Q8WZ74 1663 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms