RNA–Protein interactions for RNA: ENST00000589772.1

CNP-208, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 4

Gene CNP, Length 516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-208ENST00000589772 NISCHQ9Y2I1 1504 aa32.34■■■□□ 2.77
CNP-208ENST00000589772 CCDC180Q9P1Z9 1646 aa28.77■■■□□ 2.2
CNP-208ENST00000589772 ABCC9O60706 1549 aa28.46■■■□□ 2.15
CNP-208ENST00000589772 DCAF8L2P0C7V8 631 aa27.25■■□□□ 1.95
CNP-208ENST00000589772 RB1CC1Q8TDY2 1594 aa27.22■■□□□ 1.95
CNP-208ENST00000589772 NACADO15069 1562 aa27.12■■□□□ 1.93
CNP-208ENST00000589772 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
CNP-208ENST00000589772 MYO15BQ96JP2 1530 aa26.85■■□□□ 1.89
CNP-208ENST00000589772 DCAF1Q9Y4B6 1507 aa26.69■■□□□ 1.86
CNP-208ENST00000589772 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
CNP-208ENST00000589772 UNC13AQ9UPW8 1703 aa26.61■■□□□ 1.85
CNP-208ENST00000589772 BICRAQ9NZM4 1560 aa26.41■■□□□ 1.82
CNP-208ENST00000589772 DNAJC5BQ9UF47 199 aa26.34■■□□□ 1.81
CNP-208ENST00000589772 SCRIBQ14160 1630 aa26.32■■□□□ 1.8
CNP-208ENST00000589772 SHROOM4Q9ULL8 1493 aa26.03■■□□□ 1.76
CNP-208ENST00000589772 EIF4G1Q04637 1599 aaKnown RBP25.73■■□□□ 1.71
CNP-208ENST00000589772 CC2D2AQ9P2K1 1620 aa25.7■■□□□ 1.7
CNP-208ENST00000589772 CECR2Q9BXF3 1484 aa25.56■■□□□ 1.68
CNP-208ENST00000589772 SMARCA4P51532 1647 aa25.13■■□□□ 1.61
CNP-208ENST00000589772 BAZ1AQ9NRL2 1556 aaPredicted RBP25.06■■□□□ 1.6
CNP-208ENST00000589772 NCAPD3P42695 1498 aa25.05■■□□□ 1.6
CNP-208ENST00000589772 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
CNP-208ENST00000589772 SMARCA2P51531 1590 aa24.98■■□□□ 1.59
CNP-208ENST00000589772 MROH2BQ7Z745 1585 aa24.95■■□□□ 1.58
CNP-208ENST00000589772 HMGXB3Q12766 1538 aa24.88■■□□□ 1.57
CNP-208ENST00000589772 PEG3Q9GZU2 1588 aa24.84■■□□□ 1.57
CNP-208ENST00000589772 BAZ1BQ9UIG0 1483 aaKnown RBP24.84■■□□□ 1.57
CNP-208ENST00000589772 WIZO95785 1651 aa24.67■■□□□ 1.54
CNP-208ENST00000589772 RSF1Q96T23 1441 aaPredicted RBP24.59■■□□□ 1.53
CNP-208ENST00000589772 NESP48681 1621 aa24.57■■□□□ 1.52
CNP-208ENST00000589772 ERCC6Q03468 1493 aa24.52■■□□□ 1.52
CNP-208ENST00000589772 LAMC3Q9Y6N6 1575 aa24.4■■□□□ 1.5
CNP-208ENST00000589772 TOP2AP11388 1531 aaKnown RBP24.35■■□□□ 1.49
CNP-208ENST00000589772 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
CNP-208ENST00000589772 PDS5BQ9NTI5 1447 aa24.27■■□□□ 1.48
CNP-208ENST00000589772 CUX2O14529 1486 aa24.27■■□□□ 1.48
CNP-208ENST00000589772 KIF21AQ7Z4S6 1674 aa24.24■■□□□ 1.47
CNP-208ENST00000589772 THOC2Q8NI27 1593 aaKnown RBP24.17■■□□□ 1.46
CNP-208ENST00000589772 CFTRP13569 1480 aa24.13■■□□□ 1.45
CNP-208ENST00000589772 CCDC88BA6NC98 1476 aa24.12■■□□□ 1.45
CNP-208ENST00000589772 FANCD2Q9BXW9 1451 aa24.06■■□□□ 1.44
CNP-208ENST00000589772 MRC2Q9UBG0 1479 aa24.03■■□□□ 1.44
CNP-208ENST00000589772 CEP164Q9UPV0 1460 aa24.03■■□□□ 1.44
CNP-208ENST00000589772 WDR62O43379 1518 aa23.94■■□□□ 1.42
CNP-208ENST00000589772 SUPT5HO00267 1087 aaKnown RBP23.94■■□□□ 1.42
CNP-208ENST00000589772 PRDM2Q13029 1718 aa23.89■■□□□ 1.41
CNP-208ENST00000589772 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
CNP-208ENST00000589772 DNAJC5Q9H3Z4 198 aa23.82■■□□□ 1.4
CNP-208ENST00000589772 TOPBP1Q92547 1522 aa23.65■■□□□ 1.38
CNP-208ENST00000589772 ABCC8Q09428 1581 aa23.6■■□□□ 1.37
CNP-208ENST00000589772 DNMBPQ6XZF7 1577 aa23.58■■□□□ 1.37
CNP-208ENST00000589772 IFT140Q96RY7 1462 aa23.53■■□□□ 1.36
CNP-208ENST00000589772 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
CNP-208ENST00000589772 POLA1P09884 1462 aaPredicted RBP23.43■■□□□ 1.34
CNP-208ENST00000589772 CUX1P39880 1505 aa23.41■■□□□ 1.34
CNP-208ENST00000589772 TARBP1Q13395 1621 aaKnown RBP23.39■■□□□ 1.33
CNP-208ENST00000589772 RAD54L2Q9Y4B4 1467 aa23.38■■□□□ 1.33
CNP-208ENST00000589772 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
CNP-208ENST00000589772 SOGA1O94964 1423 aa23.36■■□□□ 1.33
CNP-208ENST00000589772 AQRO60306 1485 aaKnown RBP eCLIP23.35■■□□□ 1.33
CNP-208ENST00000589772 EIF4G3O43432 1585 aaKnown RBP23.35■■□□□ 1.33
CNP-208ENST00000589772 OSCARQ8IYS5 282 aa23.31■■□□□ 1.32
CNP-208ENST00000589772 TDRD9Q8NDG6 1382 aaKnown RBP23.28■■□□□ 1.32
CNP-208ENST00000589772 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
CNP-208ENST00000589772 FBLN2P98095 1184 aa23.16■■□□□ 1.3
CNP-208ENST00000589772 SYNJ1O43426 1573 aa23.14■■□□□ 1.3
CNP-208ENST00000589772 TOP2BQ02880 1626 aa23.13■■□□□ 1.29
CNP-208ENST00000589772 WDR97A6NE52 1622 aa23.12■■□□□ 1.29
CNP-208ENST00000589772 BIVM-ERCC5R4GMW8 1640 aa23.11■■□□□ 1.29
CNP-208ENST00000589772 CHD1O14646 1710 aa23.1■■□□□ 1.29
CNP-208ENST00000589772 ABCA10Q8WWZ4 1543 aa23.09■■□□□ 1.29
CNP-208ENST00000589772 SNAPC4Q5SXM2 1469 aa23.09■■□□□ 1.29
CNP-208ENST00000589772 GRIN2BQ13224 1484 aa23.08■■□□□ 1.29
CNP-208ENST00000589772 GAPVD1Q14C86 1478 aa23.07■■□□□ 1.28
CNP-208ENST00000589772 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
CNP-208ENST00000589772 CHMP7Q8WUX9 453 aaPredicted RBP23.02■■□□□ 1.28
CNP-208ENST00000589772 MAGI1Q96QZ7 1491 aaPredicted RBP23.02■■□□□ 1.28
CNP-208ENST00000589772 ABCA5Q8WWZ7 1642 aa23.01■■□□□ 1.27
CNP-208ENST00000589772 PBRM1Q86U86 1689 aa23■■□□□ 1.27
CNP-208ENST00000589772 SYNJ2O15056 1496 aa22.95■■□□□ 1.26
CNP-208ENST00000589772 RIMBP3CA6NJZ7 1639 aa22.92■■□□□ 1.26
CNP-208ENST00000589772 RIMBP3BA6NNM3 1639 aa22.92■■□□□ 1.26
CNP-208ENST00000589772 RIMBP3Q9UFD9 1639 aa22.92■■□□□ 1.26
CNP-208ENST00000589772 ARHGEF11O15085 1522 aa22.9■■□□□ 1.26
CNP-208ENST00000589772 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
CNP-208ENST00000589772 ADAMTS12P58397 1594 aa22.81■■□□□ 1.24
CNP-208ENST00000589772 ERICH3Q5RHP9 1530 aa22.81■■□□□ 1.24
CNP-208ENST00000589772 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
CNP-208ENST00000589772 FHAD1B1AJZ9 1412 aa22.78■■□□□ 1.24
CNP-208ENST00000589772 CYB5RLQ6IPT4 315 aa22.77■■□□□ 1.24
CNP-208ENST00000589772 KIF27Q86VH2 1401 aa22.71■■□□□ 1.23
CNP-208ENST00000589772 ARAP1Q96P48 1450 aa22.71■■□□□ 1.23
CNP-208ENST00000589772 CEP170Q5SW79 1584 aa22.68■■□□□ 1.22
CNP-208ENST00000589772 NUP160Q12769 1436 aa22.68■■□□□ 1.22
CNP-208ENST00000589772 IGF1RP08069 1367 aa22.67■■□□□ 1.22
CNP-208ENST00000589772 CUL7Q14999 1698 aa22.55■■□□□ 1.2
CNP-208ENST00000589772 ERCC6L2Q5T890 1561 aa22.55■■□□□ 1.2
CNP-208ENST00000589772 CARMIL1Q5VZK9 1371 aa22.53■■□□□ 1.2
CNP-208ENST00000589772 SHROOM2Q13796 1616 aa22.51■■□□□ 1.19
CNP-208ENST00000589772 JPH4Q96JJ6 628 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms