RNA–Protein interactions for RNA: ENST00000589426.5

PGS1-212, Transcript of phosphatidylglycerophosphate synthase 1, humanhuman

TSL 1 (best)

Gene PGS1, Length 2,033 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGS1-212ENST00000589426 NISCHQ9Y2I1 1504 aa42■■■■■ 4.31
PGS1-212ENST00000589426 CCDC180Q9P1Z9 1646 aa36.42■■■■□ 3.42
PGS1-212ENST00000589426 ZCCHC6Q5VYS8 1495 aaKnown RBP35.34■■■■□ 3.25
PGS1-212ENST00000589426 DCAF8L2P0C7V8 631 aa34.72■■■■□ 3.15
PGS1-212ENST00000589426 DCAF1Q9Y4B6 1507 aa34.69■■■■□ 3.14
PGS1-212ENST00000589426 SHROOM4Q9ULL8 1493 aa34.56■■■■□ 3.12
PGS1-212ENST00000589426 ABCC9O60706 1549 aa34.3■■■■□ 3.08
PGS1-212ENST00000589426 MYO15BQ96JP2 1530 aa34.17■■■■□ 3.06
PGS1-212ENST00000589426 NACADO15069 1562 aa33.89■■■■□ 3.02
PGS1-212ENST00000589426 SCRIBQ14160 1630 aa33.62■■■□□ 2.97
PGS1-212ENST00000589426 RB1CC1Q8TDY2 1594 aa33.54■■■□□ 2.96
PGS1-212ENST00000589426 SUPT5HO00267 1087 aaKnown RBP33.41■■■□□ 2.94
PGS1-212ENST00000589426 UNC13AQ9UPW8 1703 aa32.85■■■□□ 2.85
PGS1-212ENST00000589426 RSF1Q96T23 1441 aaPredicted RBP32.73■■■□□ 2.83
PGS1-212ENST00000589426 CECR2Q9BXF3 1484 aa32.66■■■□□ 2.82
PGS1-212ENST00000589426 BICRAQ9NZM4 1560 aa32.54■■■□□ 2.8
PGS1-212ENST00000589426 MROH2BQ7Z745 1585 aa32.48■■■□□ 2.79
PGS1-212ENST00000589426 PABPN1Q86U42 306 aaKnown RBP eCLIP32.45■■■□□ 2.79
PGS1-212ENST00000589426 BAZ1AQ9NRL2 1556 aaPredicted RBP32.4■■■□□ 2.78
PGS1-212ENST00000589426 WIZO95785 1651 aa32.22■■■□□ 2.75
PGS1-212ENST00000589426 SMARCA4P51532 1647 aa32.21■■■□□ 2.75
PGS1-212ENST00000589426 CHIC1Q5VXU3 224 aa32.1■■■□□ 2.73
PGS1-212ENST00000589426 TOP2AP11388 1531 aaKnown RBP31.87■■■□□ 2.69
PGS1-212ENST00000589426 PEG3Q9GZU2 1588 aa31.79■■■□□ 2.68
PGS1-212ENST00000589426 ATAD2BQ9ULI0 1458 aa31.64■■■□□ 2.66
PGS1-212ENST00000589426 SMARCA2P51531 1590 aa31.6■■■□□ 2.65
PGS1-212ENST00000589426 CCDC88BA6NC98 1476 aa31.6■■■□□ 2.65
PGS1-212ENST00000589426 EIF4G1Q04637 1599 aaKnown RBP31.55■■■□□ 2.64
PGS1-212ENST00000589426 BAZ1BQ9UIG0 1483 aaKnown RBP31.48■■■□□ 2.63
PGS1-212ENST00000589426 TRIM41Q8WV44 630 aa31.37■■■□□ 2.61
PGS1-212ENST00000589426 NCAPD3P42695 1498 aa31.31■■■□□ 2.6
PGS1-212ENST00000589426 HMGXB3Q12766 1538 aa31.26■■■□□ 2.59
PGS1-212ENST00000589426 ABCC8Q09428 1581 aa31.03■■■□□ 2.56
PGS1-212ENST00000589426 CC2D2AQ9P2K1 1620 aa31■■■□□ 2.55
PGS1-212ENST00000589426 LOC105371045A0A1W2PR82 267 aa30.93■■■□□ 2.54
PGS1-212ENST00000589426 FAM9AQ8IZU1 332 aaPredicted RBP30.84■■■□□ 2.53
PGS1-212ENST00000589426 WRNQ14191 1432 aaPredicted RBP eCLIP30.79■■■□□ 2.52
PGS1-212ENST00000589426 CFTRP13569 1480 aa30.7■■■□□ 2.51
PGS1-212ENST00000589426 SYNJ1O43426 1573 aa30.64■■■□□ 2.5
PGS1-212ENST00000589426 CADPSQ9ULU8 1353 aa30.55■■■□□ 2.48
PGS1-212ENST00000589426 SOGA1O94964 1423 aa30.53■■■□□ 2.48
PGS1-212ENST00000589426 EEA1Q15075 1411 aa30.48■■■□□ 2.47
PGS1-212ENST00000589426 TOP2BQ02880 1626 aa30.47■■■□□ 2.47
PGS1-212ENST00000589426 PRDM2Q13029 1718 aa30.46■■■□□ 2.47
PGS1-212ENST00000589426 EHMT2Q96KQ7 1210 aa30.42■■■□□ 2.46
PGS1-212ENST00000589426 BIVM-ERCC5R4GMW8 1640 aa30.42■■■□□ 2.46
PGS1-212ENST00000589426 RUSC2Q8N2Y8 1516 aa30.4■■■□□ 2.46
PGS1-212ENST00000589426 CUX1P39880 1505 aa30.34■■■□□ 2.45
PGS1-212ENST00000589426 CSRNP3Q8WYN3 585 aa30.34■■■□□ 2.45
PGS1-212ENST00000589426 DNAJC5BQ9UF47 199 aa30.23■■■□□ 2.43
PGS1-212ENST00000589426 FANCD2Q9BXW9 1451 aa30.21■■■□□ 2.43
PGS1-212ENST00000589426 NESP48681 1621 aa30.2■■■□□ 2.43
PGS1-212ENST00000589426 LAMC3Q9Y6N6 1575 aa30.17■■■□□ 2.42
PGS1-212ENST00000589426 GOLGA3Q08378 1498 aa30.09■■■□□ 2.41
PGS1-212ENST00000589426 TNIKQ9UKE5 1360 aa30.06■■■□□ 2.4
PGS1-212ENST00000589426 CEP164Q9UPV0 1460 aa30.06■■■□□ 2.4
PGS1-212ENST00000589426 KIF21BO75037 1637 aa30.05■■■□□ 2.4
PGS1-212ENST00000589426 UBTFP17480 764 aaKnown RBP30■■■□□ 2.39
PGS1-212ENST00000589426 KIF27Q86VH2 1401 aa29.99■■■□□ 2.39
PGS1-212ENST00000589426 FGD5Q6ZNL6 1462 aa29.98■■■□□ 2.39
PGS1-212ENST00000589426 PDS5BQ9NTI5 1447 aa29.97■■■□□ 2.39
PGS1-212ENST00000589426 DNMBPQ6XZF7 1577 aa29.96■■■□□ 2.39
PGS1-212ENST00000589426 CEP162Q5TB80 1403 aa29.93■■■□□ 2.38
PGS1-212ENST00000589426 TOPBP1Q92547 1522 aa29.91■■■□□ 2.38
PGS1-212ENST00000589426 RAPGEF2Q9Y4G8 1499 aa29.88■■■□□ 2.37
PGS1-212ENST00000589426 CUX2O14529 1486 aa29.85■■■□□ 2.37
PGS1-212ENST00000589426 PRXQ9BXM0 1461 aa29.85■■■□□ 2.37
PGS1-212ENST00000589426 URB2Q14146 1524 aaKnown RBP29.82■■■□□ 2.36
PGS1-212ENST00000589426 PCGF6Q9BYE7 350 aa29.81■■■□□ 2.36
PGS1-212ENST00000589426 ERICH3Q5RHP9 1530 aa29.8■■■□□ 2.36
PGS1-212ENST00000589426 POLA1P09884 1462 aaPredicted RBP29.79■■■□□ 2.36
PGS1-212ENST00000589426 KIF21AQ7Z4S6 1674 aa29.78■■■□□ 2.36
PGS1-212ENST00000589426 RAD54L2Q9Y4B4 1467 aa29.72■■■□□ 2.35
PGS1-212ENST00000589426 IGF1RP08069 1367 aa29.71■■■□□ 2.35
PGS1-212ENST00000589426 TRIM26Q12899 539 aaPredicted RBP29.71■■■□□ 2.35
PGS1-212ENST00000589426 ABCA10Q8WWZ4 1543 aa29.71■■■□□ 2.35
PGS1-212ENST00000589426 CLIP1P30622 1438 aa29.63■■■□□ 2.33
PGS1-212ENST00000589426 CARMIL1Q5VZK9 1371 aa29.57■■■□□ 2.32
PGS1-212ENST00000589426 MRC2Q9UBG0 1479 aa29.55■■■□□ 2.32
PGS1-212ENST00000589426 WDR97A6NE52 1622 aa29.53■■■□□ 2.32
PGS1-212ENST00000589426 RANGAP1P46060 587 aaPredicted RBP29.47■■■□□ 2.31
PGS1-212ENST00000589426 PPARGC1BQ86YN6 1023 aaKnown RBP29.47■■■□□ 2.31
PGS1-212ENST00000589426 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
PGS1-212ENST00000589426 TARBP1Q13395 1621 aaKnown RBP29.41■■■□□ 2.3
PGS1-212ENST00000589426 ABCA5Q8WWZ7 1642 aa29.41■■■□□ 2.3
PGS1-212ENST00000589426 VPS8Q8N3P4 1428 aa29.4■■■□□ 2.3
PGS1-212ENST00000589426 CUL7Q14999 1698 aa29.38■■■□□ 2.29
PGS1-212ENST00000589426 GAPVD1Q14C86 1478 aa29.38■■■□□ 2.29
PGS1-212ENST00000589426 WDR62O43379 1518 aa29.37■■■□□ 2.29
PGS1-212ENST00000589426 ERCC6Q03468 1493 aa29.37■■■□□ 2.29
PGS1-212ENST00000589426 ARAP1Q96P48 1450 aa29.29■■■□□ 2.28
PGS1-212ENST00000589426 IFT140Q96RY7 1462 aa29.24■■■□□ 2.27
PGS1-212ENST00000589426 ARHGAP35Q9NRY4 1499 aa29.24■■■□□ 2.27
PGS1-212ENST00000589426 THOC2Q8NI27 1593 aaKnown RBP29.21■■■□□ 2.27
PGS1-212ENST00000589426 AQRO60306 1485 aaKnown RBP eCLIP29.18■■■□□ 2.268e-9■■■■■ 48.9
PGS1-212ENST00000589426 TTBK1Q5TCY1 1321 aaPredicted RBP29.17■■■□□ 2.26
PGS1-212ENST00000589426 APLP2Q06481 763 aa29.16■■■□□ 2.26
PGS1-212ENST00000589426 HRCP23327 699 aa29.15■■■□□ 2.26
PGS1-212ENST00000589426 PBRM1Q86U86 1689 aa29.14■■■□□ 2.26
PGS1-212ENST00000589426 ZNF608Q9ULD9 1512 aaPredicted RBP29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms